MGE detailed information
MGE type: Prophage MGE length: 21958 bp
Accession: NZ_CP012137 Location: 1617198..1639155 Organism: Shigella flexneri 2a strain 981 Replicon: chromosome
Accession: NZ_CP012137 Location: 1617198..1639155 Organism: Shigella flexneri 2a strain 981 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AD867_RS08805 (1613040) | 1613040..1613804 | - | 765 | WP_000692136.1 | electron transfer flavoprotein | - |
| AD867_RS08815 (1614125) | 1614125..1614604 | + | 480 | Protein_1620 | cupin domain-containing protein | - |
| AD867_RS08820 (1614659) | 1614659..1615356 | + | 698 | WP_227804325.1 | IS1 family transposase | - |
| AD867_RS08825 (1615350) | 1615350..1615517 | - | 168 | WP_005062520.1 | hypothetical protein | - |
| AD867_RS08830 (1615919) | 1615919..1616679 | - | 761 | Protein_1623 | acid stress response transcriptional regulator YdeO | - |
| AD867_RS08835 (1616747) | 1616747..1616950 | - | 204 | WP_000543395.1 | two-component system connector SafA | - |
| AD867_RS08840 (1617198) | 1617198..1619477 | - | 2280 | WP_000726666.1 | acid resistance putative oxidoreductase YdeP | - |
| AD867_RS08845 (1619811) | 1619811..1620560 | - | 750 | Protein_1626 | Type 1 fimbrin D-mannose specific adhesin | VF |
| AD867_RS08855 (1620616) | 1620616..1621313 | + | 698 | WP_227804319.1 | IS1 family transposase IS1X2 | Transposase |
| AD867_RS08860 (1621331) | 1621331..1622209 | + | 879 | Protein_1628 | IS3 family transposase IS600 | Transposase |
| AD867_RS08865 (1622234) | 1622234..1622413 | - | 180 | WP_000372594.1 | class II holin family protein | - |
| AD867_RS30775 (1622563) | 1622563..1622724 | - | 162 | WP_001323614.1 | hypothetical protein | - |
| AD867_RS08870 (1622724) | 1622724..1622909 | - | 186 | Protein_1631 | DUF1737 domain-containing protein | - |
| AD867_RS08875 (1623169) | 1623169..1623504 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| AD867_RS30050 (1623785) | 1623785..1623893 | - | 109 | Protein_1633 | DUF3927 family protein | - |
| AD867_RS08900 (1624814) | 1624814..1625635 | - | 822 | WP_000762882.1 | antitermination protein | - |
| AD867_RS08905 (1625650) | 1625650..1626006 | - | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AD867_RS08910 (1626019) | 1626019..1627068 | - | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| AD867_RS08915 (1627070) | 1627070..1627348 | - | 279 | Protein_1637 | hypothetical protein | - |
| AD867_RS08920 (1627415) | 1627415..1627666 | - | 252 | WP_000980987.1 | protein Rem | - |
| AD867_RS08925 (1627884) | 1627884..1628039 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| AD867_RS08930 (1628111) | 1628111..1628398 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| AD867_RS08935 (1628398) | 1628398..1628637 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| AD867_RS27415 (1628662) | 1628662..1628967 | + | 306 | WP_071818640.1 | hypothetical protein | - |
| AD867_RS27420 (1628964) | 1628964..1630120 | - | 1157 | Protein_1643 | IS3 family transposase IS600 | Transposase |
| AD867_RS08945 (1630182) | 1630182..1631201 | + | 1020 | Protein_1644 | MHS family MFS transporter YdfJ | - |
| AD867_RS08950 (1631290) | 1631290..1632750 | + | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| AD867_RS08955 (1632786) | 1632786..1632989 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| AD867_RS08960 (1633167) | 1633167..1633853 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| AD867_RS08965 (1633942) | 1633942..1634688 | - | 747 | WP_005050098.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| AD867_RS08970 (1634825) | 1634825..1636870 | + | 2046 | WP_005068122.1 | peptidyl-dipeptidase Dcp | - |
| AD867_RS08975 (1636915) | 1636915..1637433 | - | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| AD867_RS08980 (1637709) | 1637709..1637933 | + | 225 | Protein_1651 | YdeI family stress tolerance OB fold protein | - |
| AD867_RS27435 (1637999) | 1637999..1639155 | + | 1157 | Protein_1652 | IS3 family transposase IS600 | Transposase |
| AD867_RS31290 (1639300) | 1639300..1639403 | - | 104 | Protein_1653 | protein MgtT | - |
| AD867_RS08990 (1639403) | 1639403..1639498 | - | 96 | WP_000901367.1 | protein MgtS | - |
| AD867_RS08995 (1639625) | 1639625..1640740 | - | 1116 | Protein_1655 | efflux MFS transporter YdeE | - |
| AD867_RS09000 (1641007) | 1641007..1641906 | + | 900 | WP_000087224.1 | O-acetylserine/cysteine exporter | - |
| AD867_RS09005 (1641937) | 1641937..1642155 | - | 219 | WP_000803661.1 | multiple antibiotic resistance protein MarB | - |
| AD867_RS09010 (1642187) | 1642187..1642570 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| AD867_RS09015 (1642590) | 1642590..1643024 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| AD867_RS09020 (1643232) | 1643232..1643897 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|