MGE detailed information
MGE type: Prophage MGE length: 54182 bp
Accession: NZ_CP012137 Location: 1422785..1476966 Organism: Shigella flexneri 2a strain 981 Replicon: chromosome
Accession: NZ_CP012137 Location: 1422785..1476966 Organism: Shigella flexneri 2a strain 981 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AD867_RS07610 () | 1418426..1419487 | + | 1062 | WP_000138745.1 | YcjF family protein | - |
| AD867_RS07615 () | 1419635..1421176 | + | 1542 | WP_001306544.1 | transcriptional regulator TyrR | - |
| AD867_RS07620 () | 1421220..1421726 | - | 507 | WP_000084387.1 | thiol peroxidase | - |
| AD867_RS07625 () | 1421845..1422810 | + | 966 | WP_005049759.1 | L-Ala-D/L-Glu epimerase | - |
| AD867_RS07630 () | 1422785..1423513 | - | 729 | WP_005049761.1 | murein tripeptide amidase MpaA | - |
| AD867_RS07635 () | 1423804..1424442 | - | 639 | WP_005049763.1 | SDR family oxidoreductase | - |
| AD867_RS07640 () | 1424460..1425041 | - | 582 | Protein_1409 | alpha/beta hydrolase | - |
| AD867_RS07645 () | 1425270..1426466 | + | 1197 | WP_045177644.1 | IS110 family transposase ISSfl4 | Transposase |
| AD867_RS07650 () | 1426483..1426842 | - | 360 | Protein_1411 | alpha/beta hydrolase | - |
| AD867_RS07655 () | 1426842..1427762 | - | 921 | WP_000981715.1 | alpha/beta hydrolase | - |
| AD867_RS07660 () | 1427900..1428334 | + | 435 | Protein_1413 | HTH-type transcriptional regulator PgrR | VF |
| AD867_RS27225 () | 1429639..1430049 | + | 411 | Protein_1415 | YdaU family protein | - |
| AD867_RS31255 () | 1431815..1431984 | + | 170 | Protein_1417 | hypothetical protein | - |
| AD867_RS07690 () | 1432130..1432876 | + | 747 | WP_000788996.1 | ATP-binding protein | - |
| AD867_RS07695 () | 1432891..1433313 | + | 423 | WP_001118168.1 | DUF977 family protein | - |
| AD867_RS07700 () | 1433371..1433727 | + | 357 | WP_005048249.1 | hypothetical protein | - |
| AD867_RS07705 () | 1433820..1434038 | + | 219 | WP_000256998.1 | DUF4014 family protein | - |
| AD867_RS07710 () | 1434040..1434405 | + | 366 | WP_001229297.1 | HNH endonuclease signature motif containing protein | - |
| AD867_RS07715 () | 1434402..1435067 | + | 666 | WP_000208062.1 | hypothetical protein | - |
| AD867_RS07720 () | 1435067..1435432 | + | 366 | WP_000610655.1 | DUF551 domain-containing protein | - |
| - | 1435817..1435875 | - | 59 | - | - | Antitoxin Detail |
| AD867_RS07730 () | 1435887..1436042 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| AD867_RS07750 () | 1437379..1437978 | + | 600 | WP_000940329.1 | DUF1367 family protein | - |
| AD867_RS07755 () | 1437978..1438268 | + | 291 | WP_000228038.1 | DUF1364 domain-containing protein | - |
| AD867_RS07760 () | 1438265..1438819 | + | 555 | WP_000640143.1 | DUF1133 family protein | - |
| AD867_RS07765 () | 1438972..1439145 | + | 174 | WP_000504450.1 | hypothetical protein | - |
| AD867_RS07770 () | 1439207..1440346 | + | 1140 | WP_000088354.1 | IS3 family transposase ISSd1 | Transposase |
| AD867_RS07775 () | 1440339..1440899 | + | 561 | WP_072075205.1 | ORF6N domain-containing protein | - |
| AD867_RS07800 () | 1441533..1443137 | + | 1605 | WP_000615491.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| AD867_RS07810 () | 1443959..1445127 | + | 1169 | WP_000747032.1 | IS3 family transposase ISLad1 | Transposase |
| AD867_RS07815 () | 1445505..1445657 | + | 153 | Protein_1435 | Rha family transcriptional regulator | - |
| AD867_RS07825 () | 1445716..1446413 | + | 698 | WP_225620329.1 | IS1 family transposase IS1X2 | Transposase |
| AD867_RS07830 () | 1446429..1447334 | + | 906 | Protein_1437 | IS3 family transposase ISSd1 | Transposase |
| AD867_RS07835 () | 1447362..1447730 | + | 369 | WP_011069357.1 | hypothetical protein | - |
| AD867_RS07840 () | 1447754..1448298 | + | 545 | Protein_1439 | tail fiber assembly protein | - |
| AD867_RS07845 () | 1448322..1449590 | + | 1269 | WP_005098694.1 | prophage tail fiber N-terminal domain-containing protein | - |
| AD867_RS07850 () | 1449541..1450164 | + | 624 | WP_000930141.1 | DUF4376 domain-containing protein | - |
| AD867_RS07855 () | 1450365..1451222 | - | 858 | WP_000968134.1 | Manganese transport system membrane protein MntB | ARG |
| AD867_RS07860 () | 1451219..1452076 | - | 858 | WP_001101728.1 | Manganese transport system membrane protein MntB | ARG |
| AD867_RS07865 () | 1452073..1452900 | - | 828 | WP_000983722.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| AD867_RS07870 () | 1452900..1453814 | - | 915 | WP_000555620.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| AD867_RS27245 () | 1454246..1454887 | - | 642 | Protein_1446 | Putative defective protein IntQ ; Integrase | Integrase |
| AD867_RS27250 () | 1454941..1455638 | + | 698 | WP_225620329.1 | IS1 family transposase IS1X2 | Transposase |
| AD867_RS27255 () | 1455655..1455825 | - | 171 | Protein_1448 | DUF3596 domain-containing protein | - |
| AD867_RS07890 () | 1455827..1455994 | - | 168 | WP_005049823.1 | excisionase family protein | - |
| AD867_RS27260 () | 1456042..1457251 | - | 1210 | Protein_1450 | IS3 family transposase IS629 | Transposase |
| AD867_RS07910 () | 1457326..1458423 | - | 1098 | WP_001173294.1 | AAA family ATPase | - |
| AD867_RS07915 () | 1458429..1458689 | - | 261 | WP_005135630.1 | host-nuclease inhibitor Gam family protein | - |
| AD867_RS27265 () | 1458788..1459944 | + | 1157 | Protein_1453 | IS3 family transposase IS600 | Transposase |
| AD867_RS07925 () | 1460001..1461416 | - | 1416 | Protein_1454 | exodeoxyribonuclease VIII | - |
| AD867_RS07930 () | 1461516..1461791 | - | 276 | WP_005049830.1 | hypothetical protein | - |
| AD867_RS07935 () | 1461866..1462036 | - | 171 | WP_001359121.1 | YdaE family protein | - |
| AD867_RS07940 () | 1462036..1462257 | - | 222 | WP_000560210.1 | cell division protein FtsZ | - |
| AD867_RS07955 () | 1463604..1464492 | - | 889 | Protein_1459 | Rha family transcriptional regulator | - |
| AD867_RS30730 () | 1465716..1466096 | + | 381 | Protein_1460 | IS66 family transposase ISSfl3 | Transposase |
| AD867_RS30735 () | 1466098..1466265 | + | 168 | Protein_1461 | IS66 family transposase ISSfl3 | Transposase |
| AD867_RS07970 () | 1466216..1466839 | + | 624 | WP_000930142.1 | DUF4376 domain-containing protein | - |
| AD867_RS07980 () | 1467019..1468734 | - | 1716 | WP_128568580.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| AD867_RS07990 () | 1469276..1469973 | + | 698 | WP_223368647.1 | IS1 family transposase IS1X2 | Transposase |
| AD867_RS07995 () | 1470253..1470699 | + | 447 | Protein_1465 | metallophosphoesterase | - |
| AD867_RS27280 () | 1470764..1471920 | + | 1157 | WP_094085510.1 | IS3 family transposase IS600 | Transposase |
| AD867_RS08010 () | 1471964..1472152 | + | 189 | Protein_1467 | serine/threonine-protein phosphatase | - |
| AD867_RS08015 () | 1472177..1472368 | - | 192 | WP_005049838.1 | YebW family protein | - |
| AD867_RS08020 () | 1472473..1472709 | - | 237 | WP_001295499.1 | YebV family protein | - |
| AD867_RS08025 () | 1472827..1474266 | - | 1440 | Protein_1470 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| AD867_RS08030 () | 1474346..1476966 | - | 2621 | Protein_1471 | hypothetical protein | VF |
| AD867_RS08035 () | 1476935..1478218 | - | 1284 | WP_001207280.1 | membrane integrity lipid transport subunit YebS | - |
| AD867_RS08040 () | 1478348..1478845 | + | 498 | WP_001043881.1 | L-methionine (R)-S-oxide reductase | - |
| AD867_RS08045 () | 1478942..1479640 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| AD867_RS08050 () | 1479660..1481708 | + | 2049 | WP_001055799.1 | carboxy terminal-processing peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|