MGE detailed information
MGE type: Prophage MGE length: 45517 bp
Accession: NZ_CP012018 Location: 2172787..2218303 Organism: Staphylococcus aureus strain Gv88 Replicon: chromosome
Accession: NZ_CP012018 Location: 2172787..2218303 Organism: Staphylococcus aureus strain Gv88 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAGV88_RS11095 () | 2168971..2169285 | - | 315 | Protein_2115 | MAP domain-containing protein | - |
| SAGV88_RS11100 () | 2169272..2171026 | - | 1755 | WP_001549158.1 | extracellular adherence protein Eap/Map | - |
| SAGV88_RS11105 () | 2171412..2171662 | + | 251 | Protein_2117 | sphingomyelin phosphodiesterase | - |
| SAGV88_RS11110 () | 2171984..2172163 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| SAGV88_RS11120 () | 2172474..2172734 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| SAGV88_RS11125 () | 2172787..2173137 | - | 351 | WP_000702262.1 | hypothetical protein | VF |
| SAGV88_RS11130 () | 2173201..2174373 | - | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| SAGV88_RS11135 () | 2175152..2175601 | + | 450 | WP_000727651.1 | hypothetical protein | VF |
| SAGV88_RS16390 () | 2175696..2176031 | - | 336 | Protein_2123 | SH3 domain-containing protein | - |
| SAGV88_RS11145 () | 2176681..2177172 | - | 492 | WP_000919350.1 | hypothetical protein | VF |
| SAGV88_RS11150 () | 2177363..2178118 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| SAGV88_RS11155 () | 2178130..2178384 | - | 255 | WP_000611512.1 | phage holin | - |
| SAGV88_RS11160 () | 2178436..2178543 | + | 108 | Protein_2127 | hypothetical protein | - |
| - () | 2178465..2178604 | + | 140 | NuclAT_0 | - | - |
| - () | 2178465..2178604 | + | 140 | NuclAT_0 | - | - |
| - () | 2178465..2178604 | + | 140 | NuclAT_0 | - | - |
| - () | 2178465..2178604 | + | 140 | NuclAT_0 | - | - |
| - () | 2178473..2178528 | + | 56 | - | - | Antitoxin Detail |
| SAGV88_RS16035 () | 2178596..2178772 | - | 177 | WP_078156886.1 | putative holin-like toxin | Toxin Detail |
| SAGV88_RS11165 () | 2178922..2179218 | - | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| SAGV88_RS11170 () | 2179276..2179563 | - | 288 | WP_001040261.1 | hypothetical protein | - |
| SAGV88_RS11175 () | 2179610..2179762 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| SAGV88_RS11180 () | 2179752..2183537 | - | 3786 | WP_000582158.1 | hypothetical protein | - |
| SAGV88_RS11185 () | 2183553..2185037 | - | 1485 | WP_000567408.1 | phage tail family protein | - |
| SAGV88_RS11190 () | 2185034..2189563 | - | 4530 | WP_001795393.1 | phage tail tape measure protein | - |
| SAGV88_RS16495 () | 2189620..2189781 | - | 162 | WP_001789580.1 | hypothetical protein | - |
| SAGV88_RS11195 () | 2189808..2190158 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| SAGV88_RS16040 () | 2190208..2190432 | - | 225 | WP_072050172.1 | Ig-like domain-containing protein | - |
| SAGV88_RS11200 () | 2190474..2191118 | - | 645 | WP_000268741.1 | phage tail protein | - |
| SAGV88_RS11205 () | 2191119..2191526 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| SAGV88_RS11210 () | 2191523..2191927 | - | 405 | WP_000114225.1 | HK97 gp10 family phage protein | - |
| SAGV88_RS11215 () | 2191924..2192286 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| SAGV88_RS11220 () | 2192270..2192554 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| SAGV88_RS11225 () | 2192544..2192828 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| SAGV88_RS11230 () | 2192848..2193993 | - | 1146 | WP_000154555.1 | phage major capsid protein | - |
| SAGV88_RS11235 () | 2194017..2194754 | - | 738 | Protein_2145 | Clp protease ClpP | - |
| SAGV88_RS11240 () | 2194738..2195925 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| SAGV88_RS11245 () | 2195941..2197602 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
| SAGV88_RS11250 () | 2197599..2197943 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| SAGV88_RS11255 () | 2198074..2198373 | - | 300 | WP_000988336.1 | HNH endonuclease | - |
| SAGV88_RS11260 () | 2198605..2199021 | - | 417 | WP_000590126.1 | hypothetical protein | - |
| SAGV88_RS11265 () | 2199049..2199249 | - | 201 | WP_000265039.1 | DUF1514 family protein | - |
| SAGV88_RS11270 () | 2199249..2199398 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| SAGV88_RS11275 () | 2199395..2199601 | - | 207 | WP_000195820.1 | DUF1381 domain-containing protein | - |
| SAGV88_RS11280 () | 2199638..2200174 | - | 537 | WP_001066444.1 | dUTP diphosphatase | - |
| SAGV88_RS11285 () | 2200167..2200577 | - | 411 | WP_000197967.1 | hypothetical protein | - |
| SAGV88_RS11290 () | 2200574..2201107 | - | 534 | WP_031868690.1 | hypothetical protein | - |
| SAGV88_RS11295 () | 2201104..2201451 | - | 348 | WP_000979209.1 | hypothetical protein | - |
| SAGV88_RS11300 () | 2201448..2201826 | - | 379 | Protein_2158 | hypothetical protein | - |
| SAGV88_RS11305 () | 2201862..2202110 | - | 249 | WP_072466103.1 | hypothetical protein | - |
| SAGV88_RS11310 () | 2202110..2202364 | - | 255 | WP_000022727.1 | DUF3310 domain-containing protein | - |
| SAGV88_RS11315 () | 2202364..2202727 | - | 364 | Protein_2161 | hypothetical protein | - |
| SAGV88_RS11320 () | 2202728..2202913 | - | 186 | WP_001187239.1 | DUF3113 family protein | - |
| SAGV88_RS11325 () | 2202918..2203322 | - | 405 | WP_020444760.1 | DUF1064 domain-containing protein | - |
| SAGV88_RS11330 () | 2203332..2203553 | - | 222 | WP_041205435.1 | DUF3269 family protein | - |
| SAGV88_RS16500 () | 2203566..2203727 | - | 162 | WP_000237153.1 | hypothetical protein | - |
| SAGV88_RS11340 () | 2203721..2204493 | - | 773 | Protein_2166 | ATP-binding protein | - |
| SAGV88_RS11345 () | 2204503..2205272 | - | 770 | Protein_2167 | conserved phage C-terminal domain-containing protein | - |
| SAGV88_RS11350 () | 2205318..2205977 | + | 660 | WP_016028252.1 | hypothetical protein | - |
| SAGV88_RS11355 () | 2206087..2206761 | - | 675 | WP_020444663.1 | hypothetical protein | - |
| SAGV88_RS11360 () | 2206775..2207203 | - | 429 | WP_041205441.1 | single-stranded DNA-binding protein | - |
| SAGV88_RS11365 () | 2207203..2207826 | - | 624 | WP_000139720.1 | DUF1071 domain-containing protein | - |
| SAGV88_RS11370 () | 2207819..2208040 | - | 222 | WP_000815401.1 | DUF2483 family protein | - |
| SAGV88_RS11375 () | 2208050..2208310 | - | 261 | WP_000291489.1 | hypothetical protein ; Integrase | Integrase |
| SAGV88_RS11380 () | 2208403..2208564 | - | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| SAGV88_RS11385 () | 2208561..2208881 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| SAGV88_RS11390 () | 2208940..2209572 | + | 633 | WP_000275058.1 | hypothetical protein | - |
| SAGV88_RS11395 () | 2209587..2209727 | - | 141 | WP_000939496.1 | hypothetical protein | - |
| SAGV88_RS11400 () | 2209758..2209955 | - | 198 | WP_001148861.1 | hypothetical protein | - |
| SAGV88_RS11405 () | 2209971..2210720 | - | 750 | WP_001148337.1 | phage antirepressor KilAC domain-containing protein | - |
| SAGV88_RS11410 () | 2210777..2211316 | + | 540 | WP_000351243.1 | hypothetical protein | - |
| SAGV88_RS11415 () | 2211340..2211600 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| SAGV88_RS11420 () | 2211618..2211842 | - | 225 | WP_000338186.1 | DUF739 family protein | - |
| SAGV88_RS11425 () | 2212001..2212771 | + | 771 | WP_001208482.1 | helix-turn-helix domain-containing protein | - |
| SAGV88_RS11430 () | 2212971..2213153 | + | 183 | WP_000705240.1 | hypothetical protein | - |
| SAGV88_RS11435 () | 2213189..2213335 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| SAGV88_RS11440 () | 2213332..2213946 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| SAGV88_RS11445 () | 2214054..2215091 | + | 1038 | WP_000857193.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| SAGV88_RS11450 () | 2215142..2215972 | + | 831 | Protein_2188 | hypothetical protein | VF |
| SAGV88_RS11455 () | 2216210..2217226 | - | 1017 | WP_000595324.1 | hypothetical protein | VF |
| SAGV88_RS11460 () | 2217248..2218303 | - | 1056 | WP_000791407.1 | hypothetical protein | VF |
| SAGV88_RS11465 () | 2218738..2219961 | + | 1224 | WP_000206638.1 | ArgE/DapE family deacylase | - |
| SAGV88_RS11470 () | 2220333..2221178 | - | 846 | WP_000812008.1 | class I SAM-dependent methyltransferase | - |
| SAGV88_RS11475 () | 2221240..2222151 | - | 912 | WP_000825510.1 | iron-hydroxamate ABC transporter substrate-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|