MGE detailed information
MGE type: Prophage MGE length: 66617 bp
Accession: NZ_CP012018 Location: 1983150..2049766 Organism: Staphylococcus aureus strain Gv88 Replicon: chromosome
Accession: NZ_CP012018 Location: 1983150..2049766 Organism: Staphylococcus aureus strain Gv88 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAGV88_RS15940 () | 1978280..1978950 | - | 671 | Protein_1921 | transposase | - |
| SAGV88_RS09940 () | 1979297..1980124 | - | 828 | WP_000266096.1 | alpha/beta hydrolase | - |
| SAGV88_RS09945 () | 1980127..1980246 | - | 120 | WP_001790712.1 | hypothetical protein | - |
| SAGV88_RS09950 () | 1980374..1981360 | + | 987 | WP_052997228.1 | proline dehydrogenase | - |
| SAGV88_RS09955 () | 1981482..1981946 | - | 465 | WP_001008551.1 | 6,7-dimethyl-8-ribityllumazine synthase | - |
| SAGV88_RS09960 () | 1981979..1983139 | - | 1161 | WP_001838426.1 | bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II | - |
| SAGV88_RS09965 () | 1983150..1983782 | - | 633 | WP_000493892.1 | riboflavin synthase | - |
| SAGV88_RS09970 () | 1983789..1984832 | - | 1044 | WP_000077344.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD | - |
| SAGV88_RS09975 () | 1985313..1986815 | - | 1503 | WP_020444739.1 | FAD/NAD(P)-binding domain-containing protein | - |
| SAGV88_RS09980 () | 1987338..1987652 | + | 315 | WP_000221179.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| SAGV88_RS09985 () | 1987652..1988944 | + | 1293 | WP_000989121.1 | arsenite efflux transporter membrane subunit ArsB | - |
| SAGV88_RS09990 () | 1988962..1989357 | + | 396 | WP_000163235.1 | arsenate reductase (thioredoxin) | - |
| SAGV88_RS09995 () | 1989652..1990506 | - | 855 | WP_001032833.1 | N-acetylglucosaminidase | - |
| SAGV88_RS10000 () | 1990782..1991006 | - | 225 | WP_000384171.1 | hypothetical protein | - |
| SAGV88_RS10005 () | 1991205..1991675 | + | 471 | WP_000671052.1 | RNA polymerase sigma factor SigS | - |
| SAGV88_RS10010 () | 1991788..1992231 | + | 444 | WP_001153742.1 | competence protein ComK | - |
| SAGV88_RS10015 () | 1992218..1992661 | - | 444 | WP_001030465.1 | hypothetical protein | - |
| SAGV88_RS10020 () | 1992957..1993592 | + | 636 | WP_001168904.1 | CPBP family intramembrane metalloprotease SdpA | - |
| SAGV88_RS10025 () | 1994032..1994745 | - | 714 | WP_001096494.1 | transaldolase | - |
| SAGV88_RS10030 () | 1995005..1995307 | + | 303 | WP_000091445.1 | hypothetical protein | - |
| SAGV88_RS10035 () | 1995563..1995928 | + | 366 | WP_001200542.1 | fluoride efflux transporter CrcB | - |
| SAGV88_RS10040 () | 1995925..1996278 | + | 354 | WP_000623471.1 | CrcB family protein | - |
| SAGV88_RS10045 () | 1996577..1997081 | - | 505 | Protein_1943 | IS200-IS605 family transposase ISSep3 | Transposase |
| SAGV88_RS15945 () | 1997412..1998989 | + | 1578 | Protein_1944 | IS1182 family transposase | - |
| SAGV88_RS10065 () | 1999098..1999931 | - | 834 | WP_000453320.1 | aldo/keto reductase | - |
| SAGV88_RS10070 () | 2000143..2001051 | - | 909 | WP_000366154.1 | NERD domain-containing protein | - |
| SAGV88_RS10075 () | 2001176..2002369 | - | 1194 | WP_000933822.1 | methionine adenosyltransferase | - |
| SAGV88_RS10080 () | 2002740..2004332 | + | 1593 | WP_000109906.1 | phosphoenolpyruvate carboxykinase (ATP) | - |
| SAGV88_RS10085 () | 2004468..2004952 | - | 485 | Protein_1949 | IS200-IS605 family transposase ISSep3 | Transposase |
| SAGV88_RS10090 () | 2005327..2006073 | - | 747 | WP_002868962.1 | S9 family peptidase | - |
| SAGV88_RS10095 () | 2006078..2006551 | - | 474 | WP_000672014.1 | nucleoside triphosphatase YtkD | - |
| SAGV88_RS10100 () | 2006617..2006874 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| SAGV88_RS10105 () | 2006871..2007872 | - | 1002 | WP_000778523.1 | o-succinylbenzoate synthase | - |
| SAGV88_RS10110 () | 2007877..2009355 | - | 1479 | WP_000348360.1 | o-succinylbenzoate--CoA ligase | - |
| SAGV88_RS10115 () | 2009514..2009969 | - | 456 | WP_011443643.1 | DUF4909 domain-containing protein | - |
| SAGV88_RS10120 () | 2010271..2010921 | + | 651 | WP_020444742.1 | excalibur calcium-binding domain-containing protein | - |
| SAGV88_RS10125 () | 2011002..2011997 | + | 996 | WP_000070653.1 | DUF4352 domain-containing protein | - |
| SAGV88_RS10130 () | 2012073..2012699 | + | 627 | WP_000669046.1 | hypothetical protein | - |
| SAGV88_RS10135 () | 2012740..2013084 | + | 345 | WP_000627551.1 | DUF3969 family protein | - |
| SAGV88_RS10140 () | 2013182..2013733 | + | 552 | WP_000414205.1 | hypothetical protein | - |
| SAGV88_RS10145 () | 2013951..2014592 | - | 642 | WP_000494956.1 | ImmA/IrrE family metallo-endopeptidase | - |
| SAGV88_RS10150 () | 2014706..2014891 | - | 186 | WP_000809857.1 | hypothetical protein | - |
| SAGV88_RS10155 () | 2014893..2015069 | - | 177 | WP_000375476.1 | hypothetical protein | - |
| SAGV88_RS10160 () | 2015080..2015463 | - | 384 | WP_000070811.1 | hypothetical protein | - |
| SAGV88_RS10170 () | 2016067..2016210 | - | 144 | WP_001549059.1 | IS3 family transposase IS655 | Transposase |
| SAGV88_RS16365 () | 2016413..2016508 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 2016536..2016595 | - | 60 | - | - | Antitoxin Detail |
| SAGV88_RS10175 () | 2016631..2016732 | + | 102 | WP_001791893.1 | hypothetical protein | - |
| SAGV88_RS15950 () | 2016710..2016886 | - | 177 | Protein_1968 | transposase | - |
| SAGV88_RS10180 () | 2017080..2017457 | - | 378 | WP_001037045.1 | DUF1433 domain-containing protein | - |
| SAGV88_RS10185 () | 2017978..2019303 | - | 1326 | Protein_1970 | ATP-binding protein | - |
| SAGV88_RS10190 () | 2019407..2020579 | + | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| SAGV88_RS10195 () | 2020627..2023422 | - | 2796 | Protein_1972 | ATP-binding protein | - |
| SAGV88_RS10200 () | 2024272..2025471 | - | 1200 | WP_041205415.1 | restriction endonuclease subunit S | - |
| SAGV88_RS10205 () | 2025464..2027020 | - | 1557 | WP_000028659.1 | type I restriction-modification system subunit M | - |
| SAGV88_RS10210 () | 2027184..2027318 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| SAGV88_RS10215 () | 2027383..2028102 | - | 720 | WP_001038688.1 | hypothetical protein | VF |
| SAGV88_RS10220 () | 2028253..2028969 | - | 717 | WP_001038759.1 | hypothetical protein | VF |
| SAGV88_RS16370 () | 2029071..2029178 | + | 108 | WP_011447030.1 | hypothetical protein | - |
| SAGV88_RS10225 () | 2029127..2029846 | - | 720 | WP_001038704.1 | hypothetical protein | VF |
| SAGV88_RS10230 () | 2029967..2030686 | - | 720 | WP_001038867.1 | hypothetical protein | VF |
| SAGV88_RS10235 () | 2030744..2031466 | - | 723 | WP_001039447.1 | hypothetical protein | VF |
| SAGV88_RS10240 () | 2031591..2032298 | - | 708 | WP_001039435.1 | hypothetical protein | VF |
| SAGV88_RS10250 () | 2033263..2033829 | + | 567 | WP_001092763.1 | DUF4888 domain-containing protein | - |
| SAGV88_RS15955 () | 2034303..2035001 | - | 699 | WP_000586140.1 | hypothetical protein | - |
| SAGV88_RS10260 () | 2034998..2035759 | - | 762 | WP_000581552.1 | lantibiotic immunity ABC transporter MutE/EpiE family permease subunit | - |
| SAGV88_RS10265 () | 2035756..2036448 | - | 693 | WP_001096791.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| SAGV88_RS10270 () | 2036471..2037844 | - | 1374 | WP_000691541.1 | S8 family serine peptidase | - |
| SAGV88_RS10275 () | 2037854..2038372 | - | 519 | WP_000504439.1 | flavoprotein | - |
| SAGV88_RS10280 () | 2038388..2039632 | - | 1245 | WP_000566596.1 | lanthionine synthetase C family protein | - |
| SAGV88_RS10285 () | 2039625..2041367 | - | 1743 | WP_001803290.1 | lantibiotic dehydratase | - |
| SAGV88_RS10290 () | 2041432..2041575 | - | 144 | WP_000416756.1 | gallidermin/nisin family lantibiotic | - |
| SAGV88_RS10295 () | 2042312..2042455 | - | 144 | WP_000416759.1 | gallidermin/nisin family lantibiotic | - |
| SAGV88_RS10300 () | 2042696..2043679 | - | 984 | WP_000782464.1 | hypothetical protein | VF |
| SAGV88_RS10305 () | 2043681..2044616 | - | 936 | WP_000473596.1 | hypothetical protein | VF |
| SAGV88_RS10310 () | 2045416..2045955 | + | 540 | WP_001790220.1 | hypothetical protein | - |
| SAGV88_RS10315 () | 2045968..2046756 | + | 789 | WP_000206350.1 | DUF1828 domain-containing protein | - |
| SAGV88_RS15965 () | 2047217..2047425 | + | 209 | Protein_1997 | hypothetical protein | - |
| SAGV88_RS10360 () | 2049212..2049766 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| SAGV88_RS10370 () | 2050089..2051489 | - | 1401 | WP_020444748.1 | protoporphyrinogen oxidase | - |
| SAGV88_RS10375 () | 2051513..2052436 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| SAGV88_RS10380 () | 2052494..2053531 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| SAGV88_RS10385 () | 2053521..2053631 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| SAGV88_RS10390 () | 2053794..2054297 | + | 504 | WP_000737976.1 | signal transduction protein TRAP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|