MGE detailed information
MGE type: Prophage MGE length: 47910 bp
Accession: NZ_CP012018 Location: 1159975..1207884 Organism: Staphylococcus aureus strain Gv88 Replicon: chromosome
Accession: NZ_CP012018 Location: 1159975..1207884 Organism: Staphylococcus aureus strain Gv88 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAGV88_RS05715 () | 1155350..1156261 | - | 912 | WP_000467123.1 | heme A synthase | - |
| SAGV88_RS05720 () | 1156701..1157612 | + | 912 | WP_000031401.1 | heme o synthase | - |
| SAGV88_RS05725 () | 1157637..1158098 | + | 462 | WP_000538766.1 | DUF420 domain-containing protein | - |
| SAGV88_RS05735 () | 1158425..1159462 | + | 1038 | WP_000733409.1 | CAP domain-containing protein | - |
| SAGV88_RS05740 () | 1159478..1159912 | + | 435 | WP_000606480.1 | YlbF family regulator | - |
| SAGV88_RS05745 () | 1159975..1160901 | - | 927 | WP_000757569.1 | glycerophosphodiester phosphodiesterase | - |
| SAGV88_RS05750 () | 1161140..1161394 | + | 255 | WP_001049150.1 | YlbG family protein | - |
| SAGV88_RS05755 () | 1161397..1161786 | - | 390 | WP_000814565.1 | hypothetical protein | - |
| SAGV88_RS05760 () | 1161856..1162398 | + | 543 | WP_001263796.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| SAGV88_RS05765 () | 1162400..1162882 | + | 483 | WP_000401377.1 | Phosphopantetheine adenylyltransferase | VF |
| SAGV88_RS05770 () | 1162944..1164083 | - | 1140 | WP_000843611.1 | nucleotidyltransferase | - |
| SAGV88_RS05775 () | 1164210..1164767 | + | 558 | WP_000872158.1 | DUF177 domain-containing protein | - |
| SAGV88_RS05785 () | 1164847..1165020 | + | 174 | WP_000290472.1 | 50S ribosomal protein L32 | - |
| SAGV88_RS05790 () | 1165137..1166522 | - | 1386 | WP_000861313.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| SAGV88_RS05795 () | 1166729..1167409 | - | 681 | WP_000392109.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| SAGV88_RS05800 () | 1167441..1167905 | - | 465 | WP_031767738.1 | toxin | Toxin Detail |
| SAGV88_RS05805 () | 1167918..1168241 | - | 324 | WP_001260487.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| SAGV88_RS05810 () | 1168405..1168653 | + | 249 | WP_000272859.1 | helix-turn-helix domain-containing protein | - |
| SAGV88_RS05815 () | 1168666..1169112 | + | 447 | WP_031767740.1 | hypothetical protein | - |
| SAGV88_RS05820 () | 1169127..1169270 | + | 144 | WP_000939498.1 | hypothetical protein | - |
| SAGV88_RS05825 () | 1169260..1169469 | - | 210 | WP_000642492.1 | hypothetical protein | - |
| SAGV88_RS05830 () | 1169909..1170094 | + | 186 | WP_000933363.1 | helix-turn-helix domain-containing protein | - |
| SAGV88_RS05835 () | 1170096..1170839 | + | 744 | WP_031767742.1 | phage antirepressor KilAC domain-containing protein | - |
| SAGV88_RS05840 () | 1171015..1171245 | - | 231 | WP_000395455.1 | hypothetical protein | - |
| SAGV88_RS05845 () | 1171425..1171586 | + | 162 | WP_000066026.1 | DUF1270 family protein | - |
| SAGV88_RS05850 () | 1171680..1171940 | + | 261 | WP_000291089.1 | DUF1108 family protein | - |
| SAGV88_RS05855 () | 1171953..1172489 | + | 537 | WP_001004336.1 | host-nuclease inhibitor Gam family protein | - |
| SAGV88_RS05860 () | 1172490..1173137 | + | 648 | WP_020444661.1 | ERF family protein | - |
| SAGV88_RS05865 () | 1173137..1173553 | + | 417 | WP_023180131.1 | single-stranded DNA-binding protein | - |
| SAGV88_RS05870 () | 1173567..1174241 | + | 675 | WP_059283875.1 | hypothetical protein | - |
| SAGV88_RS05875 () | 1174351..1175010 | - | 660 | WP_016028252.1 | hypothetical protein | - |
| SAGV88_RS05880 () | 1175055..1175825 | + | 771 | WP_059283876.1 | conserved phage C-terminal domain-containing protein | - |
| SAGV88_RS05885 () | 1175835..1176607 | + | 773 | Protein_1137 | ATP-binding protein | - |
| SAGV88_RS16475 () | 1176601..1176762 | + | 162 | WP_000237153.1 | hypothetical protein | - |
| SAGV88_RS05895 () | 1176775..1176996 | + | 222 | WP_041205435.1 | DUF3269 family protein | - |
| SAGV88_RS05900 () | 1177006..1177410 | + | 405 | WP_020444760.1 | DUF1064 domain-containing protein | - |
| SAGV88_RS05905 () | 1177415..1177600 | + | 186 | WP_001187239.1 | DUF3113 family protein | - |
| SAGV88_RS05910 () | 1177601..1177964 | + | 364 | Protein_1142 | hypothetical protein | - |
| SAGV88_RS05915 () | 1177964..1178218 | + | 255 | WP_000022727.1 | DUF3310 domain-containing protein | - |
| SAGV88_RS05920 () | 1178218..1178466 | + | 249 | WP_072466103.1 | hypothetical protein | - |
| SAGV88_RS05925 () | 1178479..1178883 | + | 405 | WP_020444668.1 | hypothetical protein | - |
| SAGV88_RS05930 () | 1178880..1179227 | + | 348 | WP_000979209.1 | hypothetical protein | - |
| SAGV88_RS05935 () | 1179224..1179532 | + | 309 | WP_001668981.1 | hypothetical protein | - |
| SAGV88_RS05940 () | 1179525..1179776 | + | 252 | WP_052998299.1 | DUF1024 family protein | Toxin Detail |
| SAGV88_RS16480 () | 1179766..1179939 | + | 174 | WP_000028423.1 | hypothetical protein | Antitoxin Detail |
| SAGV88_RS16485 () | 1179940..1180101 | + | 162 | WP_000889680.1 | hypothetical protein | - |
| SAGV88_RS05945 () | 1180116..1180649 | + | 534 | WP_031790047.1 | dUTPase | - |
| SAGV88_RS05950 () | 1180686..1180874 | + | 189 | WP_000195793.1 | DUF1381 domain-containing protein | - |
| SAGV88_RS05955 () | 1180849..1181049 | + | 201 | WP_001125015.1 | hypothetical protein | - |
| SAGV88_RS05960 () | 1181052..1181225 | + | 174 | WP_001797333.1 | transcriptional activator RinB | - |
| SAGV88_RS05965 () | 1181226..1181372 | + | 147 | WP_000990002.1 | hypothetical protein | - |
| SAGV88_RS05970 () | 1181387..1181806 | + | 420 | WP_000058632.1 | transcriptional regulator | - |
| SAGV88_RS05975 () | 1181994..1182434 | + | 441 | WP_001003271.1 | terminase small subunit | - |
| SAGV88_RS05980 () | 1182421..1183698 | + | 1278 | WP_000169946.1 | PBSX family phage terminase large subunit | - |
| SAGV88_RS05985 () | 1183709..1185247 | + | 1539 | WP_000921875.1 | phage portal protein | - |
| SAGV88_RS05990 () | 1185254..1186249 | + | 996 | WP_001668926.1 | minor capsid protein | - |
| SAGV88_RS05995 () | 1186322..1186492 | + | 171 | WP_000072202.1 | hypothetical protein | - |
| SAGV88_RS06000 () | 1186601..1187221 | + | 621 | WP_000392143.1 | DUF4355 domain-containing protein | - |
| SAGV88_RS06005 () | 1187235..1188209 | + | 975 | WP_000438513.1 | phage major capsid protein | - |
| SAGV88_RS06010 () | 1188231..1188518 | + | 288 | WP_001114085.1 | hypothetical protein | - |
| SAGV88_RS06015 () | 1188527..1188859 | + | 333 | WP_000208960.1 | phage head-tail connector protein | - |
| SAGV88_RS06020 () | 1188856..1189158 | + | 303 | WP_001268313.1 | hypothetical protein | - |
| SAGV88_RS06025 () | 1189158..1189505 | + | 348 | WP_001017815.1 | HK97 gp10 family phage protein | - |
| SAGV88_RS06030 () | 1189517..1189900 | + | 384 | WP_015990319.1 | hypothetical protein | - |
| SAGV88_RS06035 () | 1189919..1190500 | + | 582 | WP_031879862.1 | phage major tail protein, TP901-1 family | - |
| SAGV88_RS06040 () | 1190563..1190928 | + | 366 | WP_001100163.1 | tail assembly chaperone | - |
| SAGV88_RS06045 () | 1190958..1191302 | + | 345 | WP_000105584.1 | hypothetical protein | - |
| SAGV88_RS06050 () | 1191319..1194783 | + | 3465 | WP_031879863.1 | membrane protein | - |
| SAGV88_RS06055 () | 1194796..1195743 | + | 948 | WP_031783356.1 | phage tail family protein | - |
| SAGV88_RS06060 () | 1195752..1197653 | + | 1902 | WP_031768995.1 | phage tail protein | - |
| SAGV88_RS06065 () | 1197668..1199578 | + | 1911 | WP_029549540.1 | hypothetical protein | - |
| SAGV88_RS06070 () | 1199578..1201401 | + | 1824 | WP_031794187.1 | phage baseplate upper protein | - |
| SAGV88_RS06075 () | 1201401..1201778 | + | 378 | WP_000705893.1 | DUF2977 domain-containing protein | - |
| SAGV88_RS06080 () | 1201782..1201955 | + | 174 | WP_001790193.1 | XkdX family protein | - |
| SAGV88_RS06085 () | 1201996..1202295 | + | 300 | WP_000466769.1 | DUF2951 domain-containing protein | - |
| SAGV88_RS06090 () | 1202432..1204315 | + | 1884 | WP_052998263.1 | Bifunctional autolysin | VF |
| SAGV88_RS06095 () | 1204328..1205566 | + | 1239 | WP_000276641.1 | BppU family phage baseplate upper protein | - |
| SAGV88_RS06100 () | 1205571..1205966 | + | 396 | WP_031782932.1 | hypothetical protein | - |
| SAGV88_RS06105 () | 1206021..1206458 | + | 438 | WP_000354128.1 | phage holin | - |
| SAGV88_RS06110 () | 1206439..1207884 | + | 1446 | WP_001148135.1 | SH3 domain-containing protein | - |
| SAGV88_RS06115 () | 1208616..1210553 | - | 1938 | WP_001041586.1 | heme uptake protein IsdB | - |
| SAGV88_RS06120 () | 1210756..1211808 | - | 1053 | WP_000160859.1 | LPXTG-anchored heme-scavenging protein IsdA | - |
| SAGV88_RS06125 () | 1212017..1212700 | + | 684 | WP_000789821.1 | heme uptake protein IsdC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|