MGE detailed information
MGE type: Prophage MGE length: 58301 bp
Accession: NZ_CP012013 Location: 1641673..1699973 Organism: Staphylococcus aureus strain Be62 Replicon: chromosome
Accession: NZ_CP012013 Location: 1641673..1699973 Organism: Staphylococcus aureus strain Be62 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SABE62_RS08105 () | 1637045..1637293 | + | 249 | WP_001151997.1 | ferredoxin | - |
| SABE62_RS08110 () | 1637399..1637944 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| SABE62_RS08115 () | 1638223..1638342 | - | 120 | WP_001789947.1 | hypothetical protein | - |
| SABE62_RS08120 () | 1638541..1639455 | - | 915 | WP_000913219.1 | DUF1672 domain-containing protein | - |
| SABE62_RS08125 () | 1639470..1639676 | - | 207 | WP_001033757.1 | hypothetical protein | - |
| SABE62_RS08130 () | 1639669..1640607 | - | 939 | WP_020444682.1 | DUF1672 domain-containing protein | - |
| SABE62_RS08135 () | 1640665..1641582 | - | 918 | WP_000476873.1 | DUF1672 domain-containing protein | - |
| SABE62_RS08140 () | 1641673..1641858 | - | 186 | WP_000470336.1 | hypothetical protein | - |
| SABE62_RS08145 () | 1642134..1642691 | - | 558 | WP_000528632.1 | hypothetical protein | - |
| SABE62_RS08150 () | 1642817..1644421 | - | 1605 | WP_000284571.1 | IS1182 family transposase IS1182 | Transposase |
| SABE62_RS08155 () | 1645207..1646661 | - | 1455 | WP_020444681.1 | N-acetylmuramoyl-L-alanine amidase | - |
| SABE62_RS08160 () | 1646672..1646974 | - | 303 | WP_000339141.1 | phage holin | - |
| SABE62_RS08165 () | 1647110..1647409 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| SABE62_RS08170 () | 1647455..1647619 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| SABE62_RS08175 () | 1647612..1648001 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| SABE62_RS08180 () | 1648001..1649467 | - | 1467 | WP_020444680.1 | BppU family phage baseplate upper protein | - |
| SABE62_RS08185 () | 1649467..1651377 | - | 1911 | WP_000429552.1 | hypothetical protein | - |
| SABE62_RS08190 () | 1651393..1651683 | - | 291 | WP_000179860.1 | hypothetical protein | - |
| SABE62_RS08195 () | 1651683..1653266 | - | 1584 | WP_000384462.1 | prophage endopeptidase tail family protein | - |
| SABE62_RS08200 () | 1653275..1654099 | - | 825 | WP_020444679.1 | phage tail family protein | - |
| SABE62_RS08205 () | 1654099..1660299 | - | 6201 | WP_020444678.1 | phage tail tape measure protein | - |
| SABE62_RS08210 () | 1660313..1660471 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| SABE62_RS08215 () | 1660522..1660863 | - | 342 | WP_000589166.1 | hypothetical protein | - |
| SABE62_RS08220 () | 1660921..1661376 | - | 456 | WP_020444677.1 | Ig domain-containing protein | - |
| SABE62_RS08225 () | 1661468..1662109 | - | 642 | WP_000807540.1 | tail protein | - |
| SABE62_RS08230 () | 1662144..1662539 | - | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| SABE62_RS08235 () | 1662540..1662941 | - | 402 | WP_000110020.1 | hypothetical protein | - |
| SABE62_RS08240 () | 1662938..1663270 | - | 333 | WP_000395501.1 | hypothetical protein | - |
| SABE62_RS08245 () | 1663282..1663560 | - | 279 | WP_000050975.1 | head-tail connector protein | - |
| SABE62_RS08250 () | 1663629..1664792 | - | 1164 | WP_001142735.1 | phage major capsid protein | - |
| SABE62_RS08255 () | 1664804..1665577 | - | 774 | WP_021187674.1 | Clp protease ClpP | - |
| SABE62_RS08260 () | 1665561..1666799 | - | 1239 | WP_020444675.1 | phage portal protein | - |
| SABE62_RS08265 () | 1666804..1668495 | - | 1692 | WP_020444674.1 | terminase large subunit | - |
| SABE62_RS08270 () | 1668485..1668790 | - | 306 | WP_020444673.1 | P27 family phage terminase small subunit | - |
| SABE62_RS08275 () | 1668917..1669237 | - | 321 | WP_000166257.1 | HNH endonuclease | - |
| SABE62_RS08280 () | 1669398..1669835 | - | 438 | WP_000513704.1 | transcriptional regulator | - |
| SABE62_RS08285 () | 1669848..1671215 | - | 1368 | WP_078066180.1 | DEAD/DEAH box helicase | - |
| SABE62_RS08290 () | 1671196..1671486 | - | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| SABE62_RS08295 () | 1671620..1671724 | + | 105 | WP_011447017.1 | hypothetical protein | - |
| SABE62_RS08300 () | 1671827..1674274 | - | 2448 | WP_020444670.1 | virulence-associated E family protein | - |
| SABE62_RS08305 () | 1674326..1674526 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| SABE62_RS08310 () | 1674594..1674746 | - | 153 | WP_000237866.1 | transcriptional activator RinB | - |
| SABE62_RS08315 () | 1674749..1674949 | - | 201 | WP_001125015.1 | hypothetical protein | - |
| SABE62_RS08320 () | 1674924..1675112 | - | 189 | WP_000195789.1 | DUF1381 domain-containing protein | - |
| SABE62_RS08325 () | 1675129..1675302 | - | 174 | WP_001209219.1 | hypothetical protein | - |
| SABE62_RS08330 () | 1675339..1675873 | - | 535 | Protein_1611 | dUTP pyrophosphatase | - |
| SABE62_RS08335 () | 1675866..1676114 | - | 249 | WP_031782730.1 | DUF1024 family protein | - |
| SABE62_RS08340 () | 1676107..1676415 | - | 309 | WP_001668981.1 | hypothetical protein | - |
| SABE62_RS08345 () | 1676412..1676759 | - | 348 | WP_000979209.1 | hypothetical protein | - |
| SABE62_RS08350 () | 1676756..1677160 | - | 405 | WP_020444668.1 | hypothetical protein | - |
| SABE62_RS08355 () | 1677173..1677421 | - | 249 | WP_072466103.1 | hypothetical protein | - |
| SABE62_RS08360 () | 1677421..1677675 | - | 255 | WP_031782732.1 | DUF3310 domain-containing protein | - |
| SABE62_RS08365 () | 1677675..1678076 | - | 402 | WP_031782733.1 | phage DNA polymerase | - |
| SABE62_RS08370 () | 1678076..1678261 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| SABE62_RS08375 () | 1678274..1680226 | - | 1953 | WP_001796208.1 | DNA polymerase | - |
| SABE62_RS08380 () | 1680295..1680852 | - | 558 | WP_000645042.1 | DUF2815 family protein | - |
| SABE62_RS08385 () | 1680878..1682044 | - | 1167 | WP_000762547.1 | DUF2800 domain-containing protein | - |
| SABE62_RS08390 () | 1682041..1682403 | - | 363 | WP_000985984.1 | hypothetical protein | - |
| SABE62_RS08395 () | 1682418..1682741 | - | 324 | WP_000175001.1 | hypothetical protein | - |
| SABE62_RS08400 () | 1682820..1682981 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| SABE62_RS08405 () | 1682994..1683257 | - | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| SABE62_RS08410 () | 1683282..1683497 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| SABE62_RS08415 () | 1683552..1683917 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| SABE62_RS08420 () | 1683886..1684131 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| SABE62_RS08425 () | 1684187..1684395 | + | 209 | Protein_1630 | hypothetical protein | - |
| SABE62_RS08430 () | 1684385..1684528 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| SABE62_RS08435 () | 1684557..1685333 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| SABE62_RS08440 () | 1685347..1685583 | - | 237 | WP_001121027.1 | helix-turn-helix domain-containing protein | - |
| SABE62_RS08445 () | 1685735..1686048 | + | 314 | Protein_1634 | helix-turn-helix transcriptional regulator | - |
| SABE62_RS08450 () | 1686061..1686522 | + | 462 | WP_000525004.1 | hypothetical protein | - |
| SABE62_RS08455 () | 1686540..1687124 | + | 585 | WP_000825948.1 | hypothetical protein | - |
| SABE62_RS08460 () | 1687354..1687500 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| SABE62_RS08465 () | 1687497..1688111 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| SABE62_RS08470 () | 1688237..1689442 | + | 1206 | WP_020444721.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| SABE62_RS08475 () | 1689485..1691512 | - | 2028 | WP_001566047.1 | hypothetical protein | - |
| SABE62_RS08480 () | 1691505..1692434 | - | 930 | WP_001548912.1 | DUF1672 domain-containing protein | - |
| SABE62_RS08485 () | 1692679..1694430 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| SABE62_RS08490 () | 1694411..1695136 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| SABE62_RS08495 () | 1695269..1696006 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| SABE62_RS08500 () | 1695999..1696541 | - | 543 | WP_000368653.1 | SMC-Scp complex subunit ScpB | - |
| SABE62_RS08505 () | 1696534..1697265 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| SABE62_RS08510 () | 1697357..1697863 | + | 507 | WP_001183429.1 | DUF309 domain-containing protein | - |
| SABE62_RS08515 () | 1697941..1698828 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| SABE62_RS08520 () | 1698877..1699326 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| SABE62_RS08525 () | 1699431..1699973 | - | 543 | WP_000365246.1 | NUDIX hydrolase | - |
| SABE62_RS08530 () | 1700055..1700963 | + | 909 | WP_001171351.1 | aldo/keto reductase | - |
| SABE62_RS08535 () | 1701179..1701427 | - | 249 | WP_000995800.1 | hypothetical protein | - |
| SABE62_RS08540 () | 1701443..1702198 | - | 756 | WP_000678232.1 | SDR family oxidoreductase | - |
| SABE62_RS08545 () | 1702340..1703155 | + | 816 | WP_000779747.1 | pyrroline-5-carboxylate reductase | - |
| SABE62_RS08550 () | 1703260..1704180 | - | 921 | WP_000454064.1 | ribonuclease Z | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|