MGE detailed information
MGE type: Prophage MGE length: 32571 bp
Accession: NZ_CP012011 Location: 950997..983567 Organism: Staphylococcus aureus strain HC1340 Replicon: chromosome
Accession: NZ_CP012011 Location: 950997..983567 Organism: Staphylococcus aureus strain HC1340 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAHC1340_RS04740 () | 946098..948899 | + | 2802 | WP_001056228.1 | MSCRAMM family adhesin clumping factor ClfA | - |
| SAHC1340_RS04745 () | 949120..950646 | + | 1527 | WP_000791729.1 | von Willebrand factor binding protein Vwb | - |
| SAHC1340_RS04750 () | 950997..952019 | + | 1023 | WP_000728056.1 | extracellular matrix protein-binding adhesin Emp | - |
| SAHC1340_RS04755 () | 952354..952824 | + | 471 | WP_000824472.1 | hypothetical protein | VF |
| SAHC1340_RS04760 () | 953165..953851 | + | 687 | WP_001548082.1 | thermonuclease family protein | - |
| SAHC1340_RS04765 () | 954171..955343 | - | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| SAHC1340_RS04770 () | 955540..955740 | + | 201 | WP_001059082.1 | cold-shock protein | - |
| SAHC1340_RS04775 () | 956236..956454 | - | 219 | WP_000005886.1 | hypothetical protein | - |
| SAHC1340_RS04780 () | 956516..956800 | - | 285 | WP_001004395.1 | hypothetical protein | - |
| SAHC1340_RS04785 () | 956888..957457 | - | 570 | WP_001106654.1 | hypothetical protein | - |
| SAHC1340_RS04790 () | 957574..958746 | - | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| SAHC1340_RS04795 () | 958976..959164 | - | 189 | WP_000052078.1 | hypothetical protein | Toxin Detail |
| SAHC1340_RS04800 () | 959193..959453 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
| SAHC1340_RS04805 () | 959794..959997 | + | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
| SAHC1340_RS04810 () | 959994..960230 | - | 237 | WP_000368687.1 | hypothetical protein | - |
| SAHC1340_RS04815 () | 960455..961036 | + | 582 | WP_001140686.1 | phosphoglycerate mutase family protein | - |
| SAHC1340_RS04820 () | 961109..961726 | - | 618 | WP_000255561.1 | LysE/ArgO family amino acid transporter | - |
| SAHC1340_RS04825 () | 961881..962375 | - | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
| SAHC1340_RS04830 () | 962774..963196 | - | 423 | WP_000974460.1 | organic hydroperoxide resistance protein | - |
| SAHC1340_RS04835 () | 963344..964060 | + | 717 | WP_000150017.1 | type I 3-dehydroquinate dehydratase | - |
| SAHC1340_RS04840 () | 964143..964682 | + | 540 | WP_000422909.1 | nitroreductase | - |
| SAHC1340_RS04845 () | 964832..965152 | - | 321 | WP_001190695.1 | thioredoxin family protein | - |
| SAHC1340_RS04850 () | 965296..965652 | + | 357 | WP_000589549.1 | arsenate reductase family protein | - |
| SAHC1340_RS04855 () | 965810..966190 | + | 381 | WP_000290485.1 | glycine cleavage system protein GcvH | - |
| SAHC1340_RS04865 () | 966369..967247 | + | 879 | WP_000932216.1 | DUF1963 domain-containing protein | - |
| SAHC1340_RS04875 () | 967989..968375 | + | 387 | WP_001018962.1 | toprim domain-containing protein | - |
| SAHC1340_RS04880 () | 968368..968664 | + | 297 | WP_001065801.1 | thioredoxin family protein | - |
| SAHC1340_RS04885 () | 968914..969939 | + | 1026 | WP_000571218.1 | Methionine import ATP-binding protein MetN 2 | VF |
| SAHC1340_RS04890 () | 969932..970627 | + | 696 | WP_000520233.1 | ABC transporter permease | - |
| SAHC1340_RS04895 () | 970645..971466 | + | 822 | WP_000732326.1 | Methionine-binding lipoprotein MetQ | VF |
| SAHC1340_RS04900 () | 971610..972831 | - | 1222 | Protein_945 | Transposase from transposon Tn916 ; Integrase | Integrase |
| SAHC1340_RS04905 () | 972845..974233 | - | 1389 | WP_001637664.1 | SAP domain-containing protein | - |
| SAHC1340_RS04910 () | 974260..974832 | - | 573 | WP_001186979.1 | helix-turn-helix domain-containing protein | - |
| SAHC1340_RS04915 () | 975004..975225 | + | 222 | WP_000560872.1 | helix-turn-helix domain-containing protein | - |
| SAHC1340_RS04920 () | 975226..975498 | + | 273 | WP_000124597.1 | helix-turn-helix domain-containing protein | - |
| SAHC1340_RS16125 () | 975510..975665 | + | 156 | WP_000784891.1 | hypothetical protein | - |
| SAHC1340_RS04925 () | 975650..975853 | + | 204 | WP_001231375.1 | hypothetical protein | - |
| SAHC1340_RS04930 () | 975855..976238 | + | 384 | WP_020444649.1 | hypothetical protein | - |
| SAHC1340_RS04935 () | 976239..976559 | + | 321 | WP_042857089.1 | DUF1474 family protein | - |
| SAHC1340_RS04940 () | 976624..977493 | + | 870 | WP_001002711.1 | primase alpha helix C-terminal domain-containing protein | - |
| SAHC1340_RS04945 () | 977507..979216 | + | 1710 | WP_000447459.1 | DUF927 domain-containing protein | - |
| SAHC1340_RS04950 () | 979546..979926 | + | 381 | WP_000356938.1 | hypothetical protein | - |
| SAHC1340_RS04955 () | 979923..980564 | + | 642 | WP_001019777.1 | hypothetical protein | - |
| SAHC1340_RS04960 () | 980912..981253 | + | 342 | WP_001190598.1 | hypothetical protein | - |
| SAHC1340_RS04965 () | 981265..981843 | + | 579 | WP_000846290.1 | hypothetical protein | - |
| SAHC1340_RS04970 () | 981861..982079 | + | 219 | WP_000448775.1 | capsid morphogenesis B protein | - |
| SAHC1340_RS04975 () | 982130..982657 | + | 528 | WP_000771358.1 | spore coat protein | - |
| SAHC1340_RS16130 () | 982789..983001 | + | 213 | WP_025174984.1 | hypothetical protein | - |
| SAHC1340_RS04985 () | 982998..983567 | + | 570 | WP_001281786.1 | terminase small subunit | - |
| SAHC1340_RS04990 () | 983996..984514 | + | 519 | WP_000624990.1 | hypothetical protein | - |
| SAHC1340_RS04995 () | 984511..984939 | + | 429 | WP_000591858.1 | hypothetical protein | - |
| SAHC1340_RS16710 () | 984926..985703 | + | 778 | Protein_966 | pathogenicity island protein | - |
| SAHC1340_RS05005 () | 986226..986420 | + | 195 | WP_000752917.1 | CsbD family protein | - |
| SAHC1340_RS05010 () | 986653..987504 | - | 852 | WP_001183858.1 | DUF368 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|