MGE detailed information
MGE type: Prophage MGE length: 49437 bp
Accession: NZ_CP012011 Location: 2228065..2277501 Organism: Staphylococcus aureus strain HC1340 Replicon: chromosome
Accession: NZ_CP012011 Location: 2228065..2277501 Organism: Staphylococcus aureus strain HC1340 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAHC1340_RS11460 () | 2224116..2224430 | - | 315 | Protein_2186 | MAP domain-containing protein | - |
| SAHC1340_RS11465 () | 2224417..2226171 | - | 1755 | WP_001549158.1 | extracellular adherence protein Eap/Map | - |
| SAHC1340_RS11470 () | 2226557..2226807 | + | 251 | Protein_2188 | sphingomyelin phosphodiesterase | - |
| SAHC1340_RS11475 () | 2227129..2227308 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| SAHC1340_RS11485 () | 2227619..2227879 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| SAHC1340_RS11490 () | 2228065..2229669 | + | 1605 | WP_000284571.1 | IS1182 family transposase IS1182 | Transposase |
| SAHC1340_RS11495 () | 2229777..2230127 | - | 351 | WP_000702262.1 | Staphylococcal complement inhibitor | VF |
| SAHC1340_RS11500 () | 2230809..2231258 | + | 450 | WP_000727651.1 | Chemotaxis inhibitory protein | VF |
| SAHC1340_RS16795 () | 2231353..2231688 | - | 336 | Protein_2194 | SH3 domain-containing protein | - |
| SAHC1340_RS11510 () | 2232338..2232829 | - | 492 | WP_000919350.1 | Staphylokinase | VF |
| SAHC1340_RS11515 () | 2233020..2233775 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| SAHC1340_RS11520 () | 2233787..2234041 | - | 255 | WP_000611512.1 | phage holin | - |
| SAHC1340_RS16405 () | 2234093..2234200 | + | 108 | WP_001791821.1 | hypothetical protein | - |
| - () | 2234122..2234261 | + | 140 | NuclAT_0 | - | - |
| - () | 2234122..2234261 | + | 140 | NuclAT_0 | - | - |
| - () | 2234122..2234261 | + | 140 | NuclAT_0 | - | - |
| - () | 2234122..2234261 | + | 140 | NuclAT_0 | - | - |
| - () | 2234130..2234185 | + | 56 | - | - | Antitoxin Detail |
| SAHC1340_RS16410 () | 2234253..2234429 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| SAHC1340_RS11525 () | 2234579..2234875 | - | 297 | WP_042857037.1 | DUF2951 domain-containing protein | - |
| SAHC1340_RS11530 () | 2234933..2235220 | - | 288 | WP_001040261.1 | hypothetical protein | - |
| SAHC1340_RS11535 () | 2235267..2235419 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| SAHC1340_RS11540 () | 2235409..2239194 | - | 3786 | WP_042857036.1 | phage minor structural protein | - |
| SAHC1340_RS11545 () | 2239210..2240694 | - | 1485 | WP_000567408.1 | phage tail family protein | - |
| SAHC1340_RS11550 () | 2240691..2245220 | - | 4530 | WP_001795393.1 | phage tail tape measure protein | - |
| SAHC1340_RS11555 () | 2245465..2245815 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| SAHC1340_RS16415 () | 2245865..2246089 | - | 225 | WP_072050172.1 | Ig-like domain-containing protein | - |
| SAHC1340_RS11560 () | 2246131..2246775 | - | 645 | WP_000268741.1 | phage tail protein | - |
| SAHC1340_RS11565 () | 2246776..2247183 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| SAHC1340_RS11570 () | 2247180..2247584 | - | 405 | WP_000114225.1 | HK97 gp10 family phage protein | - |
| SAHC1340_RS11575 () | 2247581..2247943 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| SAHC1340_RS11580 () | 2247927..2248211 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| SAHC1340_RS11585 () | 2248201..2248485 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| SAHC1340_RS11590 () | 2248505..2249650 | - | 1146 | WP_000154555.1 | phage major capsid protein | - |
| SAHC1340_RS11595 () | 2249674..2250411 | - | 738 | WP_000861914.1 | Clp protease ClpP | - |
| SAHC1340_RS11600 () | 2250395..2251582 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| SAHC1340_RS11605 () | 2251598..2253259 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
| SAHC1340_RS11610 () | 2253256..2253600 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| SAHC1340_RS11615 () | 2253732..2254031 | - | 300 | WP_000988336.1 | HNH endonuclease | - |
| SAHC1340_RS11620 () | 2254263..2254679 | - | 417 | WP_000590126.1 | hypothetical protein | - |
| SAHC1340_RS11625 () | 2254707..2254907 | - | 201 | WP_000265039.1 | DUF1514 family protein | - |
| SAHC1340_RS11630 () | 2254907..2255056 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| SAHC1340_RS11635 () | 2255053..2255259 | - | 207 | WP_000195820.1 | DUF1381 domain-containing protein | - |
| SAHC1340_RS11640 () | 2255296..2255832 | - | 537 | WP_001066444.1 | dUTP diphosphatase | - |
| SAHC1340_RS11645 () | 2255825..2256235 | - | 411 | WP_000197967.1 | hypothetical protein | - |
| SAHC1340_RS11650 () | 2256232..2256765 | - | 534 | WP_031868690.1 | hypothetical protein | - |
| SAHC1340_RS11655 () | 2256762..2257109 | - | 348 | WP_000979209.1 | hypothetical protein | - |
| SAHC1340_RS11660 () | 2257106..2257510 | - | 405 | WP_020444668.1 | hypothetical protein | - |
| SAHC1340_RS11665 () | 2257523..2257771 | - | 249 | WP_072466103.1 | hypothetical protein | - |
| SAHC1340_RS11670 () | 2257771..2258025 | - | 255 | WP_000022727.1 | DUF3310 domain-containing protein | - |
| SAHC1340_RS11675 () | 2258025..2258388 | - | 364 | Protein_2231 | hypothetical protein | - |
| SAHC1340_RS11680 () | 2258389..2258574 | - | 186 | WP_001187239.1 | DUF3113 family protein | - |
| SAHC1340_RS11685 () | 2258579..2258983 | - | 405 | WP_000049780.1 | DUF1064 domain-containing protein | - |
| SAHC1340_RS11690 () | 2258980..2259405 | - | 426 | WP_015978383.1 | phage N-6-adenine-methyltransferase | - |
| SAHC1340_RS11695 () | 2259415..2259637 | - | 223 | Protein_2235 | DUF3269 family protein | - |
| SAHC1340_RS16915 () | 2259650..2259811 | - | 162 | WP_000237153.1 | hypothetical protein | - |
| SAHC1340_RS11705 () | 2259805..2260578 | - | 774 | WP_020444664.1 | IS21 family transposase ISRme9 | Transposase |
| SAHC1340_RS11710 () | 2260588..2261358 | - | 771 | WP_000190226.1 | conserved phage C-terminal domain-containing protein | - |
| SAHC1340_RS11715 () | 2261404..2262063 | + | 660 | WP_016028252.1 | hypothetical protein | - |
| SAHC1340_RS11720 () | 2262173..2262847 | - | 675 | WP_020444663.1 | hypothetical protein | - |
| SAHC1340_RS11725 () | 2262861..2263289 | - | 429 | WP_041205441.1 | single-stranded DNA-binding protein | - |
| SAHC1340_RS11730 () | 2263289..2263912 | - | 624 | WP_000139720.1 | DUF1071 domain-containing protein | - |
| SAHC1340_RS11735 () | 2263905..2264126 | - | 222 | WP_000815401.1 | DUF2483 family protein | - |
| SAHC1340_RS11740 () | 2264136..2264396 | - | 261 | WP_000291489.1 | hypothetical protein ; Integrase | Integrase |
| SAHC1340_RS11745 () | 2264489..2264650 | - | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| SAHC1340_RS11750 () | 2264647..2264967 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| SAHC1340_RS11755 () | 2265026..2265658 | + | 633 | WP_000275058.1 | hypothetical protein | - |
| SAHC1340_RS11760 () | 2265673..2265813 | - | 141 | WP_000939496.1 | hypothetical protein | - |
| SAHC1340_RS11765 () | 2265844..2266041 | - | 198 | WP_001148861.1 | hypothetical protein | - |
| SAHC1340_RS11770 () | 2266057..2266809 | - | 753 | WP_001148617.1 | phage antirepressor KilAC domain-containing protein | - |
| SAHC1340_RS11775 () | 2266866..2267405 | + | 540 | WP_000351243.1 | hypothetical protein | - |
| SAHC1340_RS11780 () | 2267429..2267689 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| SAHC1340_RS11785 () | 2267702..2267941 | - | 240 | WP_000548578.1 | helix-turn-helix domain-containing protein | - |
| SAHC1340_RS11790 () | 2268112..2268819 | + | 708 | WP_000094093.1 | XRE family transcriptional regulator | - |
| SAHC1340_RS16920 () | 2268831..2268986 | + | 156 | WP_001049399.1 | hypothetical protein | - |
| SAHC1340_RS11795 () | 2268973..2269158 | + | 186 | WP_001089804.1 | hypothetical protein | - |
| SAHC1340_RS11800 () | 2269358..2269525 | + | 168 | WP_000705238.1 | hypothetical protein | - |
| SAHC1340_RS11805 () | 2269665..2270204 | + | 540 | WP_000391618.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| SAHC1340_RS11810 () | 2270377..2271414 | + | 1038 | WP_000857198.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| SAHC1340_RS11815 () | 2271465..2272295 | + | 831 | Protein_2260 | Phospholipase C | VF |
| SAHC1340_RS11820 () | 2272533..2273549 | - | 1017 | WP_000595324.1 | putative leukocidin-like protein 1 | VF |
| SAHC1340_RS11825 () | 2273571..2274626 | - | 1056 | WP_000791407.1 | putative leukocidin-like protein 2 | VF |
| SAHC1340_RS11830 () | 2275061..2276284 | + | 1224 | WP_000206638.1 | ArgE/DapE family deacylase | - |
| SAHC1340_RS11835 () | 2276656..2277501 | - | 846 | WP_000812008.1 | class I SAM-dependent methyltransferase | - |
| SAHC1340_RS11840 () | 2277563..2278474 | - | 912 | WP_000825510.1 | iron-hydroxamate ABC transporter substrate-binding protein | - |
| SAHC1340_RS11845 () | 2278635..2279942 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| SAHC1340_RS11850 () | 2280797..2281240 | - | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| SAHC1340_RS11855 () | 2281405..2281782 | - | 378 | WP_001797573.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|