MGE detailed information
MGE type: Prophage MGE length: 27209 bp
Accession: NZ_CP011972 Location: 5146574..5173782 Organism: Pseudomonas syringae pv. actinidiae ICMP 18884 Replicon: chromosome
Accession: NZ_CP011972 Location: 5146574..5173782 Organism: Pseudomonas syringae pv. actinidiae ICMP 18884 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IYO_RS23115 () | 5141750..5142313 | + | 564 | WP_017684735.1 | tyrosine-type recombinase/integrase | - |
| IYO_RS23130 () | 5142996..5143439 | + | 444 | WP_017684732.1 | transcriptional regulator | - |
| IYO_RS34140 () | 5143589..5143804 | + | 216 | WP_020360176.1 | hypothetical protein | - |
| IYO_RS23135 () | 5144023..5146452 | - | 2430 | Protein_4537 | TonB-dependent siderophore receptor | - |
| IYO_RS23145 () | 5146574..5147512 | - | 939 | WP_017684729.1 | FecR domain-containing protein | - |
| IYO_RS23150 () | 5147516..5148025 | - | 510 | WP_003382231.1 | hypothetical protein | VF |
| IYO_RS23155 () | 5148375..5149994 | - | 1620 | WP_017684728.1 | hypothetical protein | VF |
| IYO_RS32270 () | 5150287..5150421 | + | 135 | Protein_4541 | aldo/keto reductase | - |
| IYO_RS23160 () | 5150451..5151518 | - | 1068 | WP_074556939.1 | IS630 family transposase ISPsy32 | Transposase |
| IYO_RS23165 () | 5151597..5152448 | + | 852 | Protein_4543 | aldo/keto reductase | - |
| IYO_RS23170 () | 5152445..5153035 | + | 591 | WP_017685061.1 | flavodoxin | - |
| IYO_RS23175 () | 5153060..5154052 | + | 993 | WP_017685060.1 | aldo/keto reductase | - |
| IYO_RS23180 () | 5154112..5154579 | + | 468 | WP_020304130.1 | cupin domain-containing protein | - |
| IYO_RS32275 () | 5154848..5156025 | + | 1178 | WP_164706461.1 | IS3 family transposase ISPsy28 | Transposase |
| IYO_RS23195 () | 5156182..5157012 | + | 831 | WP_017684104.1 | hypothetical protein | - |
| IYO_RS23200 () | 5157038..5158393 | - | 1356 | WP_074556941.1 | hypothetical protein ; Integrase | Integrase |
| IYO_RS23205 () | 5158634..5159701 | + | 1068 | WP_032685463.1 | IS630 family transposase ISPsy32 | Transposase |
| IYO_RS32280 () | 5159623..5160096 | - | 474 | WP_017683366.1 | hypothetical protein | - |
| IYO_RS23210 () | 5160375..5161385 | - | 1011 | WP_024533178.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IYO_RS23215 () | 5161513..5162288 | + | 776 | Protein_4553 | carboxymuconolactone decarboxylase family protein | - |
| IYO_RS23220 () | 5162413..5163357 | + | 945 | WP_017683362.1 | alpha/beta fold hydrolase | - |
| IYO_RS23225 () | 5163407..5164462 | + | 1056 | WP_017683361.1 | alpha/beta hydrolase | - |
| IYO_RS23230 () | 5164544..5165437 | + | 894 | WP_003382245.1 | HTH-type transcriptional regulator ArgP | VF |
| IYO_RS23235 () | 5165681..5165944 | + | 264 | WP_017683360.1 | hypothetical protein | - |
| IYO_RS23240 () | 5166072..5167952 | - | 1881 | WP_003382247.1 | hypothetical protein | VF |
| IYO_RS23245 () | 5168311..5170233 | + | 1923 | WP_017683359.1 | hypothetical protein | VF |
| IYO_RS23250 () | 5170398..5170664 | + | 267 | WP_003382249.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| IYO_RS23255 () | 5170664..5170939 | + | 276 | WP_017683357.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IYO_RS23260 () | 5171511..5172779 | + | 1269 | WP_007244158.1 | OprD family porin | - |
| IYO_RS23265 () | 5172958..5173782 | + | 825 | WP_003380380.1 | NAD(P)-dependent oxidoreductase | - |
| IYO_RS23270 () | 5173842..5174726 | + | 885 | WP_003380378.1 | SMP-30/gluconolactonase/LRE family protein | - |
| IYO_RS23275 () | 5174783..5175822 | + | 1040 | Protein_4565 | TRAP transporter substrate-binding protein | - |
| IYO_RS23280 () | 5175886..5176413 | + | 528 | WP_003380373.1 | TRAP transporter small permease | - |
| IYO_RS23285 () | 5176414..5177694 | + | 1281 | WP_003380372.1 | TRAP transporter large permease | - |
| IYO_RS23290 () | 5177778..5178748 | + | 971 | Protein_4568 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|