MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 78523 bp
Accession: NZ_CP011964 Location: 1263923..1342445 Organism: Bifidobacterium longum subsp. longum strain NCIMB8809 Replicon: chromosome
Accession: NZ_CP011964 Location: 1263923..1342445 Organism: Bifidobacterium longum subsp. longum strain NCIMB8809 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B8809_RS05355 () | 1259142..1260077 | + | 936 | WP_007052677.1 | DMT family transporter | - |
| B8809_RS11080 () | 1260131..1260241 | + | 111 | Protein_1040 | nitroreductase | - |
| B8809_RS05360 () | 1260461..1261429 | + | 969 | WP_007052675.1 | hypothetical protein | - |
| B8809_RS05365 () | 1261502..1262041 | + | 540 | WP_032735440.1 | peptidylprolyl isomerase | - |
| B8809_RS05370 () | 1262138..1262653 | + | 516 | WP_058062641.1 | IS3 family transposase | - |
| B8809_RS05375 () | 1262653..1263225 | + | 573 | Protein_1044 | IS3 family transposase | - |
| B8809_RS05380 () | 1263315..1264370 | - | 1056 | WP_007054866.1 | tyrosine-type recombinase/integrase | - |
| B8809_RS05385 () | 1264367..1265332 | - | 966 | WP_058062642.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| B8809_RS05390 () | 1265329..1266531 | - | 1203 | WP_007053137.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| B8809_RS05395 () | 1266690..1266980 | + | 291 | Protein_1048 | IS3 family transposase ISBlo3 | Transposase |
| B8809_RS05400 () | 1267098..1269422 | - | 2325 | WP_012471819.1 | Bifunctional (p)ppGpp synthase/hydrolase RelA | VF |
| B8809_RS05405 () | 1269556..1270032 | - | 477 | WP_007055963.1 | dUTP diphosphatase | - |
| B8809_RS05410 () | 1270032..1270325 | - | 294 | WP_007052669.1 | DUF4193 domain-containing protein | - |
| B8809_RS05415 () | 1270484..1271575 | + | 1092 | WP_007056777.1 | DUF3071 domain-containing protein | - |
| B8809_RS05420 () | 1271585..1272853 | - | 1269 | WP_007054496.1 | alkaline phosphatase family protein | - |
| B8809_RS05425 () | 1273104..1275833 | + | 2730 | WP_007052666.1 | DNA topoisomerase IV subunit A | - |
| B8809_RS05430 () | 1275978..1276766 | + | 789 | WP_007054494.1 | Transcriptional regulatory protein TcrA | VF |
| B8809_RS05435 () | 1276777..1281510 | - | 4734 | WP_058062643.1 | DEAD/DEAH box helicase | - |
| B8809_RS05440 () | 1281526..1282518 | - | 993 | WP_007056771.1 | ribokinase | - |
| B8809_RS05445 () | 1282562..1283788 | - | 1227 | WP_007056778.1 | MFS transporter | - |
| B8809_RS05450 () | 1284148..1286466 | - | 2319 | WP_013410790.1 | type IIA DNA topoisomerase subunit B | - |
| B8809_RS05455 () | 1286524..1287948 | - | 1425 | WP_058062644.1 | RNA polymerase principal sigma factor HrdB | VF |
| B8809_RS05460 () | 1288151..1288813 | - | 663 | WP_007052659.1 | DUF4192 family protein | - |
| B8809_RS05465 () | 1289020..1290102 | + | 1083 | WP_058062645.1 | polyprenyl synthetase family protein | - |
| B8809_RS05470 () | 1290246..1292519 | + | 2274 | WP_058062646.1 | Serine/threonine-protein kinase PK-1 | VF |
| B8809_RS05475 () | 1292571..1293275 | - | 705 | WP_007058769.1 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | - |
| B8809_RS05480 () | 1293336..1294031 | + | 696 | WP_013410786.1 | hypothetical protein | - |
| B8809_RS10670 () | 1294185..1294373 | - | 189 | WP_007054484.1 | hypothetical protein | - |
| B8809_RS05485 () | 1294420..1295466 | - | 1047 | WP_011068039.1 | anthranilate phosphoribosyltransferase | - |
| B8809_RS11085 () | 1295535..1295921 | - | 387 | WP_124226636.1 | hypothetical protein | - |
| B8809_RS05495 () | 1296056..1296409 | + | 354 | WP_010080769.1 | ISL3 family transposase ISTesp2 | Transposase |
| B8809_RS05500 () | 1296720..1299614 | - | 2895 | WP_007052649.1 | preprotein translocase subunit SecA | - |
| B8809_RS05505 () | 1299776..1300438 | - | 663 | WP_007052648.1 | ribosome-associated translation inhibitor RaiA | - |
| B8809_RS05510 () | 1301317..1301910 | - | 594 | WP_058062647.1 | RecX family transcriptional regulator | - |
| B8809_RS05515 () | 1301913..1303106 | - | 1194 | WP_007052644.1 | recombinase RecA | - |
| B8809_RS10195 () | 1303407..1303640 | - | 234 | WP_007052642.1 | DUF3046 domain-containing protein | - |
| B8809_RS05525 () | 1303752..1304267 | - | 516 | WP_007052641.1 | helix-turn-helix transcriptional regulator | - |
| B8809_RS05530 () | 1304327..1304860 | - | 534 | WP_011068035.1 | CinA family protein | - |
| B8809_RS05535 () | 1304872..1305507 | - | 636 | WP_007052639.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| B8809_RS05540 () | 1305684..1308593 | - | 2910 | WP_058062648.1 | DNA translocase FtsK | - |
| B8809_RS05545 () | 1308806..1309555 | + | 750 | WP_080714907.1 | putative adenosine monophosphate-protein transferase fic | VF |
| B8809_RS05550 () | 1309589..1310575 | - | 987 | WP_012577307.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| B8809_RS05555 () | 1310586..1312040 | - | 1455 | WP_058062649.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| B8809_RS05560 () | 1312172..1312912 | + | 741 | WP_007056209.1 | GTP pyrophosphokinase YwaC | VF |
| B8809_RS05565 () | 1312945..1313961 | - | 1017 | WP_007052632.1 | DMT family transporter | - |
| B8809_RS05570 () | 1314101..1315000 | - | 900 | WP_007052631.1 | Bax inhibitor-1/YccA family protein | - |
| B8809_RS05575 () | 1315181..1316026 | - | 846 | WP_007057205.1 | DUF5067 domain-containing protein | - |
| B8809_RS05580 () | 1316361..1317593 | + | 1233 | WP_007056207.1 | sensor histidine kinase | - |
| B8809_RS05585 () | 1317628..1318353 | + | 726 | WP_007056206.1 | Transcriptional regulatory protein LiaR | VF |
| B8809_RS05590 () | 1318393..1319034 | + | 642 | WP_007052627.1 | GNAT family N-acetyltransferase | - |
| B8809_RS05595 () | 1319124..1321228 | + | 2105 | Protein_1089 | DUF262 domain-containing protein | - |
| B8809_RS05600 () | 1321278..1321769 | - | 492 | WP_007054468.1 | PIN domain-containing protein | Toxin Detail |
| B8809_RS05605 () | 1321769..1322131 | - | 363 | WP_058062650.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| B8809_RS05610 () | 1322276..1324975 | - | 2700 | WP_058062651.1 | aconitate hydratase AcnA | - |
| B8809_RS05615 () | 1325096..1327672 | - | 2577 | WP_058062652.1 | HAD-IC family P-type ATPase | - |
| B8809_RS05620 () | 1327763..1328458 | - | 696 | WP_023658436.1 | hypothetical protein | - |
| B8809_RS05625 () | 1328470..1329738 | - | 1269 | WP_007055251.1 | class I SAM-dependent RNA methyltransferase | - |
| B8809_RS05630 () | 1329728..1330486 | - | 759 | WP_008783114.1 | DUF3159 domain-containing protein | - |
| B8809_RS05635 () | 1330502..1331356 | - | 855 | WP_011068026.1 | DUF3710 domain-containing protein | - |
| B8809_RS05640 () | 1331424..1332284 | - | 861 | WP_007058594.1 | exodeoxyribonuclease III | - |
| B8809_RS05645 () | 1332389..1334398 | - | 2010 | WP_008783117.1 | Glutathione import ATP-binding protein GsiA | VF |
| B8809_RS05650 () | 1334421..1335425 | - | 1005 | WP_058062653.1 | ABC transporter permease | - |
| B8809_RS05655 () | 1335444..1336370 | - | 927 | WP_007052614.1 | ABC transporter permease | - |
| B8809_RS05660 () | 1336671..1338311 | - | 1641 | WP_058062654.1 | ABC transporter substrate-binding protein | - |
| B8809_RS05665 () | 1338564..1339631 | - | 1068 | WP_008783120.1 | Tyrosine recombinase XerC | VF |
| B8809_RS05670 () | 1339666..1339923 | - | 258 | WP_058062655.1 | hypothetical protein | - |
| B8809_RS05675 () | 1340133..1341233 | - | 1101 | WP_081040089.1 | prephenate dehydrogenase/arogenate dehydrogenase family protein | - |
| B8809_RS05680 () | 1341191..1342168 | - | 978 | WP_008783121.1 | chorismate mutase | - |
| B8809_RS05685 () | 1342248..1342696 | - | 449 | Protein_1107 | alcohol dehydrogenase | - |
| B8809_RS05690 () | 1342796..1344727 | - | 1932 | WP_007052606.1 | translational GTPase TypA | - |
| B8809_RS05695 () | 1345042..1346391 | - | 1350 | WP_007052605.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|