MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 59372 bp
Accession: NZ_CP011943 Location: 1..59372 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain OLF-00D989 87-1 Replicon: plasmid virulence
Accession: NZ_CP011943 Location: 1..59372 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain OLF-00D989 87-1 Replicon: plasmid virulence
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TV13_RS22625 () | 96..548 | + | 453 | WP_000477657.1 | DSBA oxidoreductase | - |
| TV13_RS24365 () | 670..954 | + | 285 | WP_001676658.1 | hypothetical protein | - |
| TV13_RS24370 () | 911..1150 | + | 240 | WP_077681954.1 | phospholipase | - |
| TV13_RS22635 () | 1329..1595 | + | 267 | WP_016710725.1 | replication regulatory protein RepA | - |
| TV13_RS22645 () | 1845..1922 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| TV13_RS22650 () | 1903..2784 | + | 882 | WP_001676666.1 | incFII family plasmid replication initiator RepA | - |
| TV13_RS24380 () | 3640..3861 | + | 222 | WP_071530245.1 | SdiA-regulated domain-containing protein | - |
| TV13_RS22655 () | 3958..4704 | - | 747 | WP_000417897.1 | AraC family transcriptional regulator | - |
| TV13_RS22660 () | 4970..5527 | - | 558 | WP_000725064.1 | complement resistance protein Rck | - |
| TV13_RS22665 () | 5617..6462 | - | 846 | WP_000490317.1 | YjiK family protein | - |
| TV13_RS25170 () | 6513..6659 | - | 147 | WP_001141718.1 | hypothetical protein | - |
| TV13_RS22670 () | 6649..7305 | - | 657 | WP_077907617.1 | DsbA family protein | - |
| TV13_RS22675 () | 7549..7899 | - | 351 | WP_000135399.1 | helix-turn-helix transcriptional regulator | - |
| TV13_RS22680 () | 7884..8096 | - | 213 | WP_000004289.1 | transcriptional regulator PefI | - |
| TV13_RS22685 () | 8356..9210 | - | 855 | WP_001676641.1 | hypothetical protein | - |
| TV13_RS22690 () | 9393..9971 | - | 579 | WP_000085742.1 | hypothetical protein | - |
| TV13_RS22695 () | 9968..10660 | - | 693 | WP_001038509.1 | fimbrial chaperone PefD | - |
| TV13_RS22700 () | 10653..13061 | - | 2409 | WP_064079800.1 | outer membrane usher protein PefC | - |
| TV13_RS22705 () | 13288..13812 | - | 525 | WP_000748204.1 | fimbrial protein | - |
| TV13_RS22710 () | 14087..14389 | - | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| TV13_RS24885 () | 14418..14729 | + | 312 | WP_015059605.1 | hypothetical protein | - |
| TV13_RS22720 () | 15096..15482 | + | 387 | WP_000751876.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| TV13_RS24385 () | 15535..15696 | + | 162 | WP_015059604.1 | hypothetical protein | - |
| TV13_RS22725 () | 16023..17012 | - | 990 | WP_000461382.1 | RepB family plasmid replication initiator protein | - |
| TV13_RS24890 () | 17506..17801 | - | 296 | Protein_24 | cytoplasmic protein | - |
| TV13_RS22735 () | 17921..18151 | + | 231 | WP_001057493.1 | hypothetical protein | - |
| TV13_RS22740 () | 18285..18806 | - | 522 | WP_077681952.1 | hypothetical protein | - |
| TV13_RS22745 () | 19482..19700 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| TV13_RS22750 () | 19702..20007 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| TV13_RS22755 () | 20009..20299 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| TV13_RS22760 () | 20296..20817 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| TV13_RS22765 () | 20852..21634 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| TV13_RS22770 () | 21643..22356 | + | 714 | WP_000545756.1 | EAL domain-containing protein | - |
| TV13_RS22775 () | 22360..22869 | + | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| TV13_RS22780 () | 22863..23348 | + | 486 | WP_000905606.1 | membrane protein | - |
| TV13_RS24395 () | 23625..23912 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| TV13_RS22790 () | 24068..24628 | + | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| TV13_RS22795 () | 24695..25045 | - | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| TV13_RS22800 () | 25102..25527 | + | 426 | WP_000064919.1 | IS200/IS605 family transposase | - |
| TV13_RS22805 () | 25654..26304 | - | 651 | WP_001676646.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| TV13_RS22810 () | 26566..27291 | - | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| TV13_RS22815 () | 27572..29347 | - | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| TV13_RS25305 () | 29399..29566 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| TV13_RS22820 () | 29529..30296 | - | 768 | WP_001676649.1 | virulence protein SpvA | - |
| TV13_RS22825 () | 30470..30634 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| TV13_RS22830 () | 30808..31701 | - | 894 | WP_000346690.1 | virulence genes transcriptional activator SpvR | - |
| TV13_RS22835 () | 32309..33346 | + | 1038 | WP_001121400.1 | IS630 family transposase | - |
| TV13_RS22840 () | 33535..34560 | - | 1026 | WP_001576625.1 | ExeA family protein | - |
| TV13_RS22845 () | 34493..36157 | - | 1665 | WP_000098781.1 | IS481 family transposase | - |
| TV13_RS22850 () | 36141..36701 | - | 561 | WP_001240330.1 | recombinase family protein | - |
| TV13_RS22855 () | 36908..37648 | - | 741 | WP_001541566.1 | carbonic anhydrase | - |
| TV13_RS22860 () | 38303..38791 | - | 489 | WP_001135409.1 | hypothetical protein | - |
| TV13_RS22865 () | 39049..40164 | + | 1116 | WP_001247117.1 | DNA-binding protein | - |
| TV13_RS22870 () | 40250..40666 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| TV13_RS22875 () | 40850..41185 | + | 336 | WP_001527010.1 | hypothetical protein | - |
| TV13_RS22880 () | 41242..41847 | + | 606 | WP_000176303.1 | DUF2913 family protein | - |
| TV13_RS22885 () | 41844..42785 | - | 942 | WP_000728919.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| TV13_RS22890 () | 43200..44405 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| TV13_RS22895 () | 44405..45379 | + | 975 | WP_000064277.1 | ParB/RepB/Spo0J family partition protein | - |
| TV13_RS22900 () | 45461..46735 | - | 1275 | WP_000457542.1 | Y-family DNA polymerase | - |
| TV13_RS22905 () | 46735..47157 | - | 423 | WP_000925628.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| TV13_RS22910 () | 47428..49179 | + | 1752 | WP_001137853.1 | ParB/RepB/Spo0J family partition protein | - |
| TV13_RS22915 () | 49222..49386 | + | 165 | WP_001676653.1 | hypothetical protein | - |
| TV13_RS22920 () | 49323..49979 | + | 657 | Protein_63 | plasmid SOS inhibition protein A | - |
| TV13_RS25310 () | 50228..50386 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| TV13_RS25315 () | 50489..51307 | + | 819 | Protein_65 | DUF945 domain-containing protein | - |
| TV13_RS22935 () | 51618..52088 | - | 471 | WP_015056628.1 | transglycosylase SLT domain-containing protein | - |
| TV13_RS22945 () | 52504..52884 | + | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| TV13_RS22950 () | 53078..53763 | + | 686 | Protein_68 | PAS domain-containing protein | - |
| TV13_RS22955 () | 53857..54084 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| TV13_RS22960 () | 54126..54488 | + | 363 | WP_001274199.1 | type IV conjugative transfer system pilin TraA | - |
| TV13_RS22965 () | 54503..54814 | + | 312 | WP_000012130.1 | type IV conjugative transfer system protein TraL | - |
| TV13_RS22970 () | 54836..55402 | + | 567 | WP_000399767.1 | type IV conjugative transfer system protein TraE | - |
| TV13_RS22975 () | 55389..56129 | + | 741 | WP_001230718.1 | type-F conjugative transfer system secretin TraK | - |
| TV13_RS22980 () | 56129..57550 | + | 1422 | WP_000146697.1 | conjugal transfer protein TraB | - |
| TV13_RS22985 () | 57540..58136 | + | 597 | WP_000527901.1 | conjugal transfer protein TraP | - |
| TV13_RS22990 () | 58114..58338 | + | 225 | WP_016716015.1 | DUF2689 domain-containing protein | - |
| TV13_RS22995 () | 58335..58849 | + | 515 | Protein_77 | type IV conjugative transfer system lipoprotein TraV | - |
| TV13_RS23000 () | 58929..59351 | + | 423 | Protein_78 | fertility inhibition protein FinO | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|