MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 70055 bp
Accession: NZ_CP011936 Location: 1..70055 Organism: Leptospira interrogans serovar Manilae strain UP-MMC-NIID HP Replicon: plasmid pLIMHP1
Accession: NZ_CP011936 Location: 1..70055 Organism: Leptospira interrogans serovar Manilae strain UP-MMC-NIID HP Replicon: plasmid pLIMHP1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LIMHP_RS19265 () | 559..4860 | + | 4302 | WP_000432394.1 | LIC12048 family lipoprotein | - |
| LIMHP_RS19270 () | 5476..13155 | + | 7680 | WP_001001550.1 | hypothetical protein | - |
| LIMHP_RS19275 () | 13152..13562 | + | 411 | WP_000632647.1 | hypothetical protein | - |
| LIMHP_RS19280 () | 13685..14851 | - | 1167 | WP_000033040.1 | helix-turn-helix domain-containing protein | - |
| LIMHP_RS19285 () | 14870..15097 | - | 228 | WP_000236474.1 | hypothetical protein | - |
| LIMHP_RS19290 () | 15354..15734 | + | 381 | WP_000410390.1 | hypothetical protein | - |
| LIMHP_RS19295 () | 15741..16640 | - | 900 | WP_000110231.1 | membrane protein | - |
| LIMHP_RS19300 () | 16665..17285 | - | 621 | WP_000060573.1 | hypothetical protein | - |
| LIMHP_RS19305 () | 18477..19067 | + | 591 | WP_033108469.1 | hypothetical protein | - |
| LIMHP_RS19310 () | 19254..20266 | + | 1013 | Protein_9 | hypothetical protein | - |
| LIMHP_RS19315 () | 20487..20642 | + | 156 | WP_017853083.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| LIMHP_RS19320 () | 21247..21450 | - | 204 | WP_000534163.1 | hypothetical protein | - |
| LIMHP_RS19325 () | 21511..21888 | - | 378 | WP_001206462.1 | hypothetical protein | - |
| LIMHP_RS23005 () | 21893..22169 | - | 277 | Protein_13 | BrnT family toxin | - |
| LIMHP_RS19330 () | 22270..22572 | + | 303 | WP_100220184.1 | integrase core domain protein | - |
| LIMHP_RS19335 () | 23227..23439 | + | 213 | WP_000447737.1 | hypothetical protein | - |
| LIMHP_RS19340 () | 23488..23910 | + | 423 | WP_000402983.1 | hypothetical protein | - |
| LIMHP_RS19345 () | 24258..24494 | + | 237 | WP_000443825.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LIMHP_RS19350 () | 24488..24829 | + | 342 | WP_000240418.1 | endoribonuclease MazF | Toxin Detail |
| LIMHP_RS19355 () | 25193..25426 | + | 234 | WP_000557895.1 | hypothetical protein | - |
| LIMHP_RS19370 () | 26886..27473 | - | 588 | WP_000708295.1 | hypothetical protein | - |
| LIMHP_RS23015 () | 27639..27824 | - | 186 | WP_000793447.1 | hypothetical protein | - |
| LIMHP_RS19375 () | 27836..28300 | - | 465 | WP_000457405.1 | hypothetical protein | - |
| LIMHP_RS23575 () | 29671..29958 | + | 288 | WP_082280350.1 | IS3 family transposase | - |
| LIMHP_RS19390 () | 30078..30998 | + | 921 | WP_000413569.1 | DUF2971 domain-containing protein | - |
| LIMHP_RS19395 () | 31261..32187 | + | 927 | WP_000587204.1 | hypothetical protein | - |
| LIMHP_RS19400 () | 32727..33188 | + | 462 | WP_000811792.1 | hypothetical protein | - |
| LIMHP_RS22305 () | 33295..33906 | + | 612 | WP_000851075.1 | hypothetical protein | - |
| LIMHP_RS19410 () | 34566..35468 | - | 903 | WP_020783218.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| LIMHP_RS22310 () | 35844..35993 | + | 150 | WP_100220180.1 | IS3 family transposase | - |
| LIMHP_RS19415 () | 36215..37249 | + | 1035 | WP_000161325.1 | DUF4917 family protein | - |
| LIMHP_RS23195 () | 37294..37497 | + | 204 | WP_158423348.1 | IS3 family transposase | - |
| LIMHP_RS19425 () | 37699..37998 | + | 300 | WP_000835630.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| LIMHP_RS19430 () | 38001..38447 | + | 447 | WP_001240337.1 | PIN domain-containing protein | - |
| LIMHP_RS19435 () | 38723..39046 | + | 324 | WP_002156492.1 | hypothetical protein | - |
| LIMHP_RS19445 () | 39525..39827 | + | 303 | WP_000562222.1 | nucleotidyltransferase domain-containing protein | - |
| LIMHP_RS19450 () | 39817..40056 | + | 240 | WP_000833996.1 | hypothetical protein | - |
| LIMHP_RS19455 () | 40388..40834 | + | 447 | WP_000445079.1 | GNAT family N-acetyltransferase | - |
| LIMHP_RS19460 () | 41561..42082 | + | 522 | WP_001058387.1 | hypothetical protein | - |
| LIMHP_RS19465 () | 42134..42397 | + | 264 | WP_000830370.1 | hypothetical protein | - |
| LIMHP_RS19470 () | 42930..43832 | - | 903 | WP_048657724.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| LIMHP_RS22320 () | 44185..44596 | - | 412 | Protein_43 | helix-turn-helix domain-containing protein | - |
| LIMHP_RS19485 () | 46282..46512 | + | 231 | WP_000372799.1 | hypothetical protein | - |
| LIMHP_RS19490 () | 47267..47740 | + | 474 | WP_000878569.1 | hypothetical protein | - |
| LIMHP_RS19495 () | 47848..48108 | + | 261 | WP_000624759.1 | ribbon-helix-helix domain-containing protein | - |
| LIMHP_RS19500 () | 48086..48502 | + | 417 | WP_001181767.1 | PIN domain-containing protein | - |
| LIMHP_RS19505 () | 48677..49093 | + | 417 | WP_000795145.1 | hypothetical protein | - |
| LIMHP_RS23580 () | 49602..49772 | - | 171 | WP_170317389.1 | hypothetical protein | - |
| LIMHP_RS19515 () | 49836..49973 | - | 138 | WP_000263416.1 | ankyrin repeat domain-containing protein | - |
| LIMHP_RS19520 () | 50193..50741 | + | 549 | WP_000460629.1 | serine acetyltransferase | - |
| LIMHP_RS19525 () | 51214..52158 | + | 945 | WP_001085030.1 | DUF2971 domain-containing protein | - |
| LIMHP_RS19530 () | 52347..53273 | + | 927 | WP_000058748.1 | hypothetical protein | - |
| LIMHP_RS19535 () | 53543..55078 | - | 1536 | WP_025176343.1 | hypothetical protein | - |
| LIMHP_RS22325 () | 55227..55637 | - | 411 | WP_000490310.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| LIMHP_RS19550 () | 56093..56986 | - | 894 | WP_000041754.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| LIMHP_RS19565 () | 59153..60043 | - | 891 | WP_017853078.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| LIMHP_RS19570 () | 60266..61699 | - | 1434 | WP_001000336.1 | helix-turn-helix domain-containing protein | - |
| LIMHP_RS19575 () | 62804..63043 | + | 240 | WP_000370531.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| LIMHP_RS19580 () | 63040..63438 | + | 399 | WP_000712075.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| LIMHP_RS19585 () | 64002..64379 | + | 378 | WP_000105506.1 | hypothetical protein | - |
| LIMHP_RS19590 () | 64796..65614 | + | 819 | WP_000515169.1 | ParA family protein | - |
| LIMHP_RS19595 () | 65655..66626 | + | 972 | WP_000673304.1 | ParB/RepB/Spo0J family partition protein | - |
| LIMHP_RS19600 () | 67017..68456 | + | 1440 | WP_000141301.1 | hypothetical protein | - |
| LIMHP_RS19605 () | 68848..69312 | - | 465 | WP_000207205.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|