NZ_CP01178964257..267844

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 203588 bp
Accession: NZ_CP011789        Location: 64257..267844         Organism: Pseudomonas putida strain PC2       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
AB688_RS00245 () 59443..59793 + 351 WP_063546583.1 hypothetical protein -
AB688_RS00250 () 59970..60659 + 690 WP_063546584.1 NYN domain-containing protein -
AB688_RS00255 () 61358..61705 + 348 WP_063541444.1 hypothetical protein -
AB688_RS00260 () 61737..62753 + 1017 WP_063541446.1 hypothetical protein -
AB688_RS00265 () 62750..63724 - 975 WP_063541448.1 hypothetical protein -
AB688_RS00270 () 63697..64401 - 705 WP_063541450.1 hypothetical protein -
AB688_RS00275 () 64398..64943 - 546 WP_063541452.1 hypothetical protein -
AB688_RS00280 () 64940..65863 - 924 WP_063541454.1 hypothetical protein -
AB688_RS00285 () 65860..66570 - 711 WP_063541456.1 hypothetical protein -
AB688_RS00290 () 66578..68956 - 2379 WP_063541458.1 phage tail protein -
AB688_RS00295 () 68966..69490 - 525 WP_063541460.1 phage tail protein -
AB688_RS00300 () 69487..70659 - 1173 WP_063541462.1 baseplate J/gp47 family protein -
AB688_RS00305 () 70656..70973 - 318 WP_063541464.1 DUF2590 family protein -
AB688_RS00310 () 70973..73258 - 2286 WP_063541466.1 phage tail tape measure protein -
AB688_RS00315 () 73433..73720 - 288 WP_063541468.1 hypothetical protein -
AB688_RS00320 () 73717..74208 - 492 WP_063541470.1 lysis system i-spanin subunit Rz -
AB688_RS00325 () 74196..74726 - 531 WP_063541472.1 hypothetical protein -
AB688_RS00330 () 74723..74929 - 207 WP_063541474.1 hypothetical protein -
AB688_RS00335 () 74926..75138 - 213 WP_063541476.1 TraR/DksA family transcriptional regulator -
AB688_RS00340 () 75138..75587 - 450 WP_063541478.1 DUF2597 family protein -
AB688_RS00345 () 75594..76709 - 1116 WP_063541480.1 DUF2586 family protein -
AB688_RS00350 () 76721..77362 - 642 WP_063541482.1 phage virion morphogenesis protein -
AB688_RS00355 () 77388..77843 - 456 WP_063541484.1 phage tail protein -
AB688_RS00360 () 77840..78301 - 462 WP_063541486.1 head completion/stabilization protein -
AB688_RS00365 () 78398..79135 - 738 WP_063541488.1 terminase -
AB688_RS00370 () 79132..80151 - 1020 WP_063541490.1 phage major capsid protein, P2 family -
AB688_RS00375 () 80151..81125 - 975 WP_063546586.1 GPO family capsid scaffolding protein -
AB688_RS00380 () 81286..83268 + 1983 Protein_74 terminase -
AB688_RS00385 () 83165..84121 + 957 WP_081255322.1 phage portal protein -
AB688_RS25965 () 84183..84440 + 258 WP_081255173.1 ogr/Delta-like zinc finger family protein -
AB688_RS00390 () 84483..84665 - 183 WP_063541496.1 hypothetical protein -
AB688_RS00395 () 84754..85092 - 339 WP_063541498.1 helix-turn-helix domain-containing protein -
AB688_RS00400 () 85177..85377 + 201 WP_063541500.1 DNA-binding protein -
AB688_RS00405 () 85407..85886 + 480 WP_063541502.1 hypothetical protein -
AB688_RS00410 () 85883..86122 + 240 WP_063541504.1 hypothetical protein -
AB688_RS00415 () 86190..86423 + 234 WP_063541506.1 hypothetical protein -
AB688_RS00420 () 86432..89119 + 2688 WP_063546588.1 toprim domain-containing protein -
AB688_RS00425 () 89125..89388 + 264 WP_063541508.1 hypothetical protein -
AB688_RS00430 () 89470..89745 + 276 WP_063541510.1 hypothetical protein -
AB688_RS00435 () 89775..90155 + 381 WP_063546590.1 DUF2528 family protein -
AB688_RS26955 () 90152..90604 + 453 WP_063541511.1 hypothetical protein -
AB688_RS00455 () 91078..92250 + 1173 WP_063541513.1 hypothetical protein ; Integrase Integrase
AB688_RS00460 () 92556..93875 + 1320 WP_063541515.1 Prophage integrase IntA ; Integrase Integrase
AB688_RS00465 () 94805..95785 + 981 WP_063546592.1 Tyrosine recombinase XerC ; Integrase Integrase
AB688_RS25980 () 95782..96057 + 276 WP_081255175.1 hypothetical protein -
AB688_RS26680 () 96526..98082 - 1557 WP_146226828.1 hypothetical protein -
AB688_RS00475 () 99072..99368 - 297 WP_063541519.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
AB688_RS00480 () 99358..99597 - 240 WP_063541521.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin Detail
AB688_RS00485 () 99754..100455 - 702 WP_063541524.1 arsenical resistance protein ArsH -
AB688_RS00490 () 100465..100935 - 471 WP_063541526.1 arsenate reductase ArsC -
AB688_RS00495 () 100963..102246 - 1284 WP_054891260.1 arsenic transporter -
AB688_RS00500 () 102265..102612 - 348 WP_063541527.1 metalloregulator ArsR/SmtB family transcription factor -
AB688_RS00505 () 102688..104985 - 2298 WP_063541529.1 Ferripyoverdine receptor VF
AB688_RS00510 () 105125..105841 + 717 WP_063541531.1 Aerobic respiration control protein ArcA VF
AB688_RS00515 () 105843..107213 + 1371 WP_063541533.1 Osmolarity sensor protein EnvZ VF
AB688_RS00520 () 107401..107754 + 354 WP_063541535.1 hypothetical protein -
AB688_RS00525 () 107824..108285 - 462 WP_063541537.1 hypothetical protein -
AB688_RS00530 () 108285..109199 - 915 WP_063541539.1 hypothetical protein -
AB688_RS00535 () 109310..110233 - 924 WP_063541541.1 hypothetical protein VF
AB688_RS00540 () 110306..112084 - 1779 WP_063541543.1 hypothetical protein VF
AB688_RS00545 () 112077..113285 - 1209 WP_063541545.1 hypothetical protein VF
AB688_RS00550 () 113285..113989 - 705 WP_054891238.1 Lipoprotein-releasing system ATP-binding protein LolD VF
AB688_RS00555 () 113989..116979 - 2991 WP_063541547.1 Serine/threonine-protein kinase PrkC VF
AB688_RS00560 () 116988..117707 - 720 WP_063541549.1 Protein phosphatase PrpC VF
AB688_RS00565 () 117704..118366 - 663 WP_155738176.1 hypothetical protein VF
AB688_RS00570 () 118363..121869 - 3507 WP_063541551.1 hypothetical protein VF
AB688_RS00575 () 121866..123173 - 1308 WP_063541553.1 putative lipoprotein YiaD VF
AB688_RS00580 () 123180..124514 - 1335 WP_054891233.1 hypothetical protein VF
AB688_RS00585 () 124530..125027 - 498 WP_054891232.1 hypothetical protein VF
AB688_RS00590 () 125076..126431 - 1356 WP_063541555.1 hypothetical protein VF
AB688_RS00595 () 126828..127865 + 1038 WP_054891230.1 hypothetical protein VF
AB688_RS00600 () 127923..128438 + 516 WP_054891229.1 hypothetical protein VF
AB688_RS00605 () 128449..129942 + 1494 WP_063541557.1 hypothetical protein VF
AB688_RS00610 () 130047..130535 + 489 WP_054891227.1 Protein hcp1 VF
AB688_RS00615 () 130627..131142 + 516 WP_063541559.1 hypothetical protein VF
AB688_RS00620 () 131139..133001 + 1863 WP_054891225.1 hypothetical protein VF
AB688_RS00625 () 132965..134014 + 1050 WP_054891224.1 hypothetical protein VF
AB688_RS00630 () 134007..136679 + 2673 WP_063541561.1 Protein ClpV1 VF
AB688_RS00635 () 136703..138640 + 1938 WP_063541563.1 Actin cross-linking toxin VgrG1 VF
AB688_RS00640 () 138652..139086 + 435 WP_063541565.1 DUF1795 domain-containing protein -
AB688_RS00645 () 139095..143504 + 4410 WP_063541567.1 RHS domain-containing protein -
AB688_RS00650 () 143501..144292 + 792 WP_063541569.1 hypothetical protein -
AB688_RS00655 () 144351..145670 - 1320 WP_063541571.1 OprD family porin -
AB688_RS00660 () 146155..148257 + 2103 WP_063541573.1 TonB-dependent siderophore receptor -
AB688_RS00665 () 148334..148777 + 444 WP_063541575.1 hypothetical protein -
AB688_RS00670 () 148847..149329 - 483 WP_054891215.1 protein-export chaperone SecB -
AB688_RS00675 () 149369..149623 - 255 WP_054891214.1 glutaredoxin 3 -
AB688_RS00680 () 149625..150038 - 414 WP_054891213.1 rhodanese-like domain-containing protein -
AB688_RS00685 () 150245..151780 + 1536 WP_063541577.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -
AB688_RS00690 () 151922..153214 + 1293 WP_054891211.1 murein hydrolase activator EnvC -
AB688_RS00695 () 153301..154626 + 1326 WP_054891210.1 S41 family peptidase -
AB688_RS00700 () 154635..155399 + 765 WP_063541579.1 divergent polysaccharide deacetylase family protein -
AB688_RS00705 () 155421..160112 - 4692 WP_063541581.1 hypothetical protein -
AB688_RS00710 () 160308..162257 - 1950 WP_177339380.1 BCCT family transporter -
AB688_RS00715 () 162789..163454 + 666 WP_054891206.1 transcriptional regulator BetI -
AB688_RS00720 () 163485..164957 + 1473 WP_063541583.1 betaine-aldehyde dehydrogenase -
AB688_RS00725 () 165034..166731 + 1698 WP_054891204.1 choline dehydrogenase -
AB688_RS00730 () 166987..168729 + 1743 WP_054891203.1 potassium/proton antiporter -
AB688_RS00735 () 168764..172069 + 3306 WP_063541585.1 mechanosensitive channel MscK -
AB688_RS00740 () 172233..173693 + 1461 WP_063541587.1 YdiU family protein -
AB688_RS00745 () 173767..174201 + 435 WP_063541589.1 thioredoxin TrxC -
AB688_RS00750 () 174198..174971 - 774 WP_054891199.1 Sporulation initiation inhibitor protein Soj VF
AB688_RS00755 () 175024..175929 - 906 WP_063541591.1 LysR family transcriptional regulator -
AB688_RS00760 () 176037..177281 + 1245 WP_063541593.1 MFS transporter -
AB688_RS00765 () 177330..177677 - 348 WP_054891196.1 NirD/YgiW/YdeI family stress tolerance protein -
AB688_RS00770 () 177795..178859 - 1065 WP_063541595.1 uroporphyrinogen decarboxylase -
AB688_RS00775 () 179039..180457 - 1419 WP_054891194.1 FAD-dependent oxidoreductase -
AB688_RS00780 () 180581..185026 - 4446 WP_063541597.1 glutamate synthase large subunit -
AB688_RS00785 () 185402..187000 - 1599 WP_063541599.1 ExeA family protein -
AB688_RS00790 () 187016..188113 - 1098 WP_054891191.1 3-dehydroquinate synthase -
AB688_RS00795 () 188211..188729 - 519 WP_063541601.1 shikimate kinase AroK -
AB688_RS00800 () 188734..189972 - 1239 WP_081255323.1 Type IV pilus biogenesis and competence protein PilQ VF
AB688_RS00805 () 189926..190936 - 1011 WP_081255176.1 hypothetical protein VF
AB688_RS00810 () 190939..191424 - 486 WP_081255177.1 PilN domain-containing protein -
AB688_RS00815 () 191469..192353 - 885 WP_063541605.1 hypothetical protein VF
AB688_RS00820 () 192524..194977 + 2454 WP_063541607.1 penicillin-binding protein 1A -
AB688_RS00825 () 195107..196375 - 1269 WP_054891184.1 malate dehydrogenase -
AB688_RS00830 () 196551..197378 - 828 WP_063541609.1 thermonuclease family protein -
AB688_RS00835 () 197381..197596 - 216 WP_054891182.1 50S ribosomal protein L31 -
AB688_RS00840 () 197764..199983 + 2220 WP_063541611.1 primosomal protein N' -
AB688_RS00845 () 200116..201852 + 1737 WP_054891180.1 arginine--tRNA ligase -
AB688_RS00850 () 201854..202552 + 699 WP_063541613.1 SPOR domain-containing protein -
AB688_RS00855 () 202599..203018 - 420 WP_063541615.1 TM2 domain-containing protein -
AB688_RS00860 () 203187..203819 + 633 WP_054891178.1 Murein DD-endopeptidase MepH VF
AB688_RS00865 () 203875..204876 - 1002 WP_063541617.1 Twitching mobility protein VF
AB688_RS00870 () 204942..205628 + 687 WP_063541619.1 YggS family pyridoxal phosphate-dependent enzyme -
AB688_RS00875 () 205667..206485 + 819 WP_054891175.1 pyrroline-5-carboxylate reductase -
AB688_RS00880 () 206496..207086 + 591 WP_054891174.1 YggT family protein -
AB688_RS00885 () 207175..208314 + 1140 WP_054891173.1 homoserine O-acetyltransferase -
AB688_RS00890 () 208322..208942 + 621 WP_063541621.1 methionine biosynthesis protein MetW -
AB688_RS00895 () 208967..209401 + 435 WP_063541623.1 DUF4426 domain-containing protein -
AB688_RS00900 () 209398..209994 + 597 WP_054891170.1 dITP/XTP pyrophosphatase VF
AB688_RS00905 () 209991..211169 + 1179 WP_063541625.1 radical SAM family heme chaperone HemW -
AB688_RS00910 () 211179..211505 + 327 WP_054891168.1 DUF3392 family protein -
AB688_RS00915 () 211561..212283 - 723 WP_054891167.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
AB688_RS00920 () 212293..213087 - 795 WP_008092966.1 thiazole synthase -
AB688_RS00925 () 213141..213341 - 201 WP_063546598.1 sulfur carrier protein ThiS -
AB688_RS00930 () 213444..213815 - 372 WP_054891165.1 DUF423 domain-containing protein -
AB688_RS00935 () 213880..214590 + 711 WP_054891164.1 monofunctional biosynthetic peptidoglycan transglycosylase -
AB688_RS00940 () 214669..215523 - 855 WP_063541627.1 RNA polymerase sigma factor RpoH -
AB688_RS00945 () 215635..216660 - 1026 WP_063541629.1 permease-like cell division protein FtsX -
AB688_RS00950 () 216657..217328 - 672 WP_011531723.1 Cell division ATP-binding protein FtsE VF
AB688_RS00955 () 217325..218824 - 1500 WP_063541631.1 signal recognition particle-docking protein FtsY -
AB688_RS00960 () 219055..220410 + 1356 WP_063541633.1 insulinase family protein -
AB688_RS00965 () 220403..221902 + 1500 WP_063541635.1 insulinase family protein -
AB688_RS00970 () 221902..222495 + 594 WP_063541637.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
AB688_RS00975 () 222544..225303 + 2760 WP_155738177.1 insulinase family protein -
AB688_RS00980 () 225367..226359 + 993 WP_063541641.1 hydrolase -
AB688_RS00985 () 226372..227226 - 855 WP_063541643.1 sulfurtransferase -
AB688_RS00990 () 227261..227926 - 666 WP_054891154.1 hypothetical protein VF
AB688_RS00995 () 228066..229496 + 1431 WP_063541645.1 coniferyl aldehyde dehydrogenase -
AB688_RS01000 () 229626..230105 + 480 WP_063541647.1 Phosphopantetheine adenylyltransferase VF
AB688_RS01005 () 230261..230512 + 252 WP_011531711.1 YfhL family 4Fe-4S dicluster ferredoxin -
AB688_RS01010 () 230512..232194 + 1683 WP_063541649.1 Glutathione hydrolase proenzyme VF
AB688_RS01015 () 232236..233048 - 813 WP_063541651.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase -
AB688_RS01020 () 233052..233870 - 819 WP_196759887.1 HDOD domain-containing protein -
AB688_RS01025 () 234102..235298 + 1197 WP_063541655.1 class I SAM-dependent rRNA methyltransferase -
AB688_RS01030 () 235422..236477 - 1056 WP_063541657.1 magnesium transporter -
AB688_RS01035 () 236961..238802 + 1842 WP_054891146.1 dihydroxy-acid dehydratase -
AB688_RS01040 () 238984..240039 - 1056 WP_196759888.1 haloacid dehalogenase-like hydrolase -
AB688_RS01045 () 240283..241674 + 1392 WP_063541661.1 L-cystine transporter -
AB688_RS01050 () 241867..242382 - 516 WP_063541663.1 dihydrofolate reductase -
AB688_RS01055 () 242437..243828 + 1392 WP_063541665.1 DUF2868 domain-containing protein -
AB688_RS01060 () 243821..245185 + 1365 WP_063541667.1 GTPase/DUF3482 domain-containing protein -
AB688_RS01065 () 245427..245975 - 549 WP_063541669.1 HD domain-containing protein -
AB688_RS01070 () 246027..247046 - 1020 WP_063541671.1 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein -
AB688_RS01075 () 247076..248800 - 1725 WP_063541673.1 putative 2-aminoethylphosphonate ABC transporter permease subunit -
AB688_RS01080 () 248802..249860 - 1059 WP_063541675.1 Sulfate/thiosulfate import ATP-binding protein CysA VF
AB688_RS01085 () 250012..250881 - 870 WP_054891136.1 HTH-type transcriptional activator CmpR VF
AB688_RS01090 () 250891..253161 - 2271 WP_063541677.1 heavy metal translocating P-type ATPase -
AB688_RS01095 () 253260..253703 + 444 WP_063541679.1 cadmium resistance transcriptional regulator CadR -
AB688_RS01100 () 253787..254758 - 972 WP_063541681.1 thymidylate synthase -
AB688_RS01105 () 254809..255618 - 810 WP_054891132.1 prolipoprotein diacylglyceryl transferase -
AB688_RS01110 () 255629..256411 - 783 WP_063541683.1 sulfite exporter TauE/SafE family protein -
AB688_RS01115 () 256542..257291 + 750 WP_063541685.1 NRDE family protein -
AB688_RS01120 () 257340..259613 - 2274 WP_063541687.1 phosphoenolpyruvate--protein phosphotransferase -
AB688_RS01125 () 259636..260115 - 480 WP_029614755.1 RNA pyrophosphohydrolase -
AB688_RS01130 () 260260..260916 + 657 WP_063541689.1 HAD-IB family hydrolase -
AB688_RS01135 () 260970..261395 - 426 WP_054891127.1 DUF2269 domain-containing protein -
AB688_RS01140 () 261491..263005 - 1515 WP_063541691.1 threonine ammonia-lyase, biosynthetic -
AB688_RS01145 () 263140..263814 + 675 WP_054891125.1 ribose-5-phosphate isomerase RpiA -
AB688_RS01150 () 263939..264850 - 912 WP_063541693.1 SdiA-regulated domain-containing protein -
AB688_RS01155 () 264939..265859 - 921 WP_063541695.1 SdiA-regulated domain-containing protein -
AB688_RS01160 () 266015..266680 - 666 WP_063541697.1 fumarylacetoacetate hydrolase family protein -
AB688_RS01165 () 266709..268106 - 1398 WP_063541699.1 FAD-binding oxidoreductase -
AB688_RS01170 () 268279..269508 + 1230 WP_063541701.1 phosphoglycerate dehydrogenase -
AB688_RS01175 () 269619..270095 - 477 WP_054891119.1 DUF4399 domain-containing protein -
AB688_RS01180 () 270326..270805 + 480 WP_063541703.1 transporter substrate-binding domain-containing protein -
AB688_RS01185 () 270921..271412 - 492 WP_063541705.1 DUF523 domain-containing protein -
AB688_RS01190 () 271399..272031 - 633 WP_063546600.1 2OG-Fe(II) oxygenase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance