MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 203588 bp
Accession: NZ_CP011789 Location: 64257..267844 Organism: Pseudomonas putida strain PC2 Replicon: chromosome
Accession: NZ_CP011789 Location: 64257..267844 Organism: Pseudomonas putida strain PC2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
AB688_RS00245 () | 59443..59793 | + | 351 | WP_063546583.1 | hypothetical protein | - |
AB688_RS00250 () | 59970..60659 | + | 690 | WP_063546584.1 | NYN domain-containing protein | - |
AB688_RS00255 () | 61358..61705 | + | 348 | WP_063541444.1 | hypothetical protein | - |
AB688_RS00260 () | 61737..62753 | + | 1017 | WP_063541446.1 | hypothetical protein | - |
AB688_RS00265 () | 62750..63724 | - | 975 | WP_063541448.1 | hypothetical protein | - |
AB688_RS00270 () | 63697..64401 | - | 705 | WP_063541450.1 | hypothetical protein | - |
AB688_RS00275 () | 64398..64943 | - | 546 | WP_063541452.1 | hypothetical protein | - |
AB688_RS00280 () | 64940..65863 | - | 924 | WP_063541454.1 | hypothetical protein | - |
AB688_RS00285 () | 65860..66570 | - | 711 | WP_063541456.1 | hypothetical protein | - |
AB688_RS00290 () | 66578..68956 | - | 2379 | WP_063541458.1 | phage tail protein | - |
AB688_RS00295 () | 68966..69490 | - | 525 | WP_063541460.1 | phage tail protein | - |
AB688_RS00300 () | 69487..70659 | - | 1173 | WP_063541462.1 | baseplate J/gp47 family protein | - |
AB688_RS00305 () | 70656..70973 | - | 318 | WP_063541464.1 | DUF2590 family protein | - |
AB688_RS00310 () | 70973..73258 | - | 2286 | WP_063541466.1 | phage tail tape measure protein | - |
AB688_RS00315 () | 73433..73720 | - | 288 | WP_063541468.1 | hypothetical protein | - |
AB688_RS00320 () | 73717..74208 | - | 492 | WP_063541470.1 | lysis system i-spanin subunit Rz | - |
AB688_RS00325 () | 74196..74726 | - | 531 | WP_063541472.1 | hypothetical protein | - |
AB688_RS00330 () | 74723..74929 | - | 207 | WP_063541474.1 | hypothetical protein | - |
AB688_RS00335 () | 74926..75138 | - | 213 | WP_063541476.1 | TraR/DksA family transcriptional regulator | - |
AB688_RS00340 () | 75138..75587 | - | 450 | WP_063541478.1 | DUF2597 family protein | - |
AB688_RS00345 () | 75594..76709 | - | 1116 | WP_063541480.1 | DUF2586 family protein | - |
AB688_RS00350 () | 76721..77362 | - | 642 | WP_063541482.1 | phage virion morphogenesis protein | - |
AB688_RS00355 () | 77388..77843 | - | 456 | WP_063541484.1 | phage tail protein | - |
AB688_RS00360 () | 77840..78301 | - | 462 | WP_063541486.1 | head completion/stabilization protein | - |
AB688_RS00365 () | 78398..79135 | - | 738 | WP_063541488.1 | terminase | - |
AB688_RS00370 () | 79132..80151 | - | 1020 | WP_063541490.1 | phage major capsid protein, P2 family | - |
AB688_RS00375 () | 80151..81125 | - | 975 | WP_063546586.1 | GPO family capsid scaffolding protein | - |
AB688_RS00380 () | 81286..83268 | + | 1983 | Protein_74 | terminase | - |
AB688_RS00385 () | 83165..84121 | + | 957 | WP_081255322.1 | phage portal protein | - |
AB688_RS25965 () | 84183..84440 | + | 258 | WP_081255173.1 | ogr/Delta-like zinc finger family protein | - |
AB688_RS00390 () | 84483..84665 | - | 183 | WP_063541496.1 | hypothetical protein | - |
AB688_RS00395 () | 84754..85092 | - | 339 | WP_063541498.1 | helix-turn-helix domain-containing protein | - |
AB688_RS00400 () | 85177..85377 | + | 201 | WP_063541500.1 | DNA-binding protein | - |
AB688_RS00405 () | 85407..85886 | + | 480 | WP_063541502.1 | hypothetical protein | - |
AB688_RS00410 () | 85883..86122 | + | 240 | WP_063541504.1 | hypothetical protein | - |
AB688_RS00415 () | 86190..86423 | + | 234 | WP_063541506.1 | hypothetical protein | - |
AB688_RS00420 () | 86432..89119 | + | 2688 | WP_063546588.1 | toprim domain-containing protein | - |
AB688_RS00425 () | 89125..89388 | + | 264 | WP_063541508.1 | hypothetical protein | - |
AB688_RS00430 () | 89470..89745 | + | 276 | WP_063541510.1 | hypothetical protein | - |
AB688_RS00435 () | 89775..90155 | + | 381 | WP_063546590.1 | DUF2528 family protein | - |
AB688_RS26955 () | 90152..90604 | + | 453 | WP_063541511.1 | hypothetical protein | - |
AB688_RS00455 () | 91078..92250 | + | 1173 | WP_063541513.1 | hypothetical protein ; Integrase | Integrase |
AB688_RS00460 () | 92556..93875 | + | 1320 | WP_063541515.1 | Prophage integrase IntA ; Integrase | Integrase |
AB688_RS00465 () | 94805..95785 | + | 981 | WP_063546592.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
AB688_RS25980 () | 95782..96057 | + | 276 | WP_081255175.1 | hypothetical protein | - |
AB688_RS26680 () | 96526..98082 | - | 1557 | WP_146226828.1 | hypothetical protein | - |
AB688_RS00475 () | 99072..99368 | - | 297 | WP_063541519.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
AB688_RS00480 () | 99358..99597 | - | 240 | WP_063541521.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
AB688_RS00485 () | 99754..100455 | - | 702 | WP_063541524.1 | arsenical resistance protein ArsH | - |
AB688_RS00490 () | 100465..100935 | - | 471 | WP_063541526.1 | arsenate reductase ArsC | - |
AB688_RS00495 () | 100963..102246 | - | 1284 | WP_054891260.1 | arsenic transporter | - |
AB688_RS00500 () | 102265..102612 | - | 348 | WP_063541527.1 | metalloregulator ArsR/SmtB family transcription factor | - |
AB688_RS00505 () | 102688..104985 | - | 2298 | WP_063541529.1 | Ferripyoverdine receptor | VF |
AB688_RS00510 () | 105125..105841 | + | 717 | WP_063541531.1 | Aerobic respiration control protein ArcA | VF |
AB688_RS00515 () | 105843..107213 | + | 1371 | WP_063541533.1 | Osmolarity sensor protein EnvZ | VF |
AB688_RS00520 () | 107401..107754 | + | 354 | WP_063541535.1 | hypothetical protein | - |
AB688_RS00525 () | 107824..108285 | - | 462 | WP_063541537.1 | hypothetical protein | - |
AB688_RS00530 () | 108285..109199 | - | 915 | WP_063541539.1 | hypothetical protein | - |
AB688_RS00535 () | 109310..110233 | - | 924 | WP_063541541.1 | hypothetical protein | VF |
AB688_RS00540 () | 110306..112084 | - | 1779 | WP_063541543.1 | hypothetical protein | VF |
AB688_RS00545 () | 112077..113285 | - | 1209 | WP_063541545.1 | hypothetical protein | VF |
AB688_RS00550 () | 113285..113989 | - | 705 | WP_054891238.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
AB688_RS00555 () | 113989..116979 | - | 2991 | WP_063541547.1 | Serine/threonine-protein kinase PrkC | VF |
AB688_RS00560 () | 116988..117707 | - | 720 | WP_063541549.1 | Protein phosphatase PrpC | VF |
AB688_RS00565 () | 117704..118366 | - | 663 | WP_155738176.1 | hypothetical protein | VF |
AB688_RS00570 () | 118363..121869 | - | 3507 | WP_063541551.1 | hypothetical protein | VF |
AB688_RS00575 () | 121866..123173 | - | 1308 | WP_063541553.1 | putative lipoprotein YiaD | VF |
AB688_RS00580 () | 123180..124514 | - | 1335 | WP_054891233.1 | hypothetical protein | VF |
AB688_RS00585 () | 124530..125027 | - | 498 | WP_054891232.1 | hypothetical protein | VF |
AB688_RS00590 () | 125076..126431 | - | 1356 | WP_063541555.1 | hypothetical protein | VF |
AB688_RS00595 () | 126828..127865 | + | 1038 | WP_054891230.1 | hypothetical protein | VF |
AB688_RS00600 () | 127923..128438 | + | 516 | WP_054891229.1 | hypothetical protein | VF |
AB688_RS00605 () | 128449..129942 | + | 1494 | WP_063541557.1 | hypothetical protein | VF |
AB688_RS00610 () | 130047..130535 | + | 489 | WP_054891227.1 | Protein hcp1 | VF |
AB688_RS00615 () | 130627..131142 | + | 516 | WP_063541559.1 | hypothetical protein | VF |
AB688_RS00620 () | 131139..133001 | + | 1863 | WP_054891225.1 | hypothetical protein | VF |
AB688_RS00625 () | 132965..134014 | + | 1050 | WP_054891224.1 | hypothetical protein | VF |
AB688_RS00630 () | 134007..136679 | + | 2673 | WP_063541561.1 | Protein ClpV1 | VF |
AB688_RS00635 () | 136703..138640 | + | 1938 | WP_063541563.1 | Actin cross-linking toxin VgrG1 | VF |
AB688_RS00640 () | 138652..139086 | + | 435 | WP_063541565.1 | DUF1795 domain-containing protein | - |
AB688_RS00645 () | 139095..143504 | + | 4410 | WP_063541567.1 | RHS domain-containing protein | - |
AB688_RS00650 () | 143501..144292 | + | 792 | WP_063541569.1 | hypothetical protein | - |
AB688_RS00655 () | 144351..145670 | - | 1320 | WP_063541571.1 | OprD family porin | - |
AB688_RS00660 () | 146155..148257 | + | 2103 | WP_063541573.1 | TonB-dependent siderophore receptor | - |
AB688_RS00665 () | 148334..148777 | + | 444 | WP_063541575.1 | hypothetical protein | - |
AB688_RS00670 () | 148847..149329 | - | 483 | WP_054891215.1 | protein-export chaperone SecB | - |
AB688_RS00675 () | 149369..149623 | - | 255 | WP_054891214.1 | glutaredoxin 3 | - |
AB688_RS00680 () | 149625..150038 | - | 414 | WP_054891213.1 | rhodanese-like domain-containing protein | - |
AB688_RS00685 () | 150245..151780 | + | 1536 | WP_063541577.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
AB688_RS00690 () | 151922..153214 | + | 1293 | WP_054891211.1 | murein hydrolase activator EnvC | - |
AB688_RS00695 () | 153301..154626 | + | 1326 | WP_054891210.1 | S41 family peptidase | - |
AB688_RS00700 () | 154635..155399 | + | 765 | WP_063541579.1 | divergent polysaccharide deacetylase family protein | - |
AB688_RS00705 () | 155421..160112 | - | 4692 | WP_063541581.1 | hypothetical protein | - |
AB688_RS00710 () | 160308..162257 | - | 1950 | WP_177339380.1 | BCCT family transporter | - |
AB688_RS00715 () | 162789..163454 | + | 666 | WP_054891206.1 | transcriptional regulator BetI | - |
AB688_RS00720 () | 163485..164957 | + | 1473 | WP_063541583.1 | betaine-aldehyde dehydrogenase | - |
AB688_RS00725 () | 165034..166731 | + | 1698 | WP_054891204.1 | choline dehydrogenase | - |
AB688_RS00730 () | 166987..168729 | + | 1743 | WP_054891203.1 | potassium/proton antiporter | - |
AB688_RS00735 () | 168764..172069 | + | 3306 | WP_063541585.1 | mechanosensitive channel MscK | - |
AB688_RS00740 () | 172233..173693 | + | 1461 | WP_063541587.1 | YdiU family protein | - |
AB688_RS00745 () | 173767..174201 | + | 435 | WP_063541589.1 | thioredoxin TrxC | - |
AB688_RS00750 () | 174198..174971 | - | 774 | WP_054891199.1 | Sporulation initiation inhibitor protein Soj | VF |
AB688_RS00755 () | 175024..175929 | - | 906 | WP_063541591.1 | LysR family transcriptional regulator | - |
AB688_RS00760 () | 176037..177281 | + | 1245 | WP_063541593.1 | MFS transporter | - |
AB688_RS00765 () | 177330..177677 | - | 348 | WP_054891196.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
AB688_RS00770 () | 177795..178859 | - | 1065 | WP_063541595.1 | uroporphyrinogen decarboxylase | - |
AB688_RS00775 () | 179039..180457 | - | 1419 | WP_054891194.1 | FAD-dependent oxidoreductase | - |
AB688_RS00780 () | 180581..185026 | - | 4446 | WP_063541597.1 | glutamate synthase large subunit | - |
AB688_RS00785 () | 185402..187000 | - | 1599 | WP_063541599.1 | ExeA family protein | - |
AB688_RS00790 () | 187016..188113 | - | 1098 | WP_054891191.1 | 3-dehydroquinate synthase | - |
AB688_RS00795 () | 188211..188729 | - | 519 | WP_063541601.1 | shikimate kinase AroK | - |
AB688_RS00800 () | 188734..189972 | - | 1239 | WP_081255323.1 | Type IV pilus biogenesis and competence protein PilQ | VF |
AB688_RS00805 () | 189926..190936 | - | 1011 | WP_081255176.1 | hypothetical protein | VF |
AB688_RS00810 () | 190939..191424 | - | 486 | WP_081255177.1 | PilN domain-containing protein | - |
AB688_RS00815 () | 191469..192353 | - | 885 | WP_063541605.1 | hypothetical protein | VF |
AB688_RS00820 () | 192524..194977 | + | 2454 | WP_063541607.1 | penicillin-binding protein 1A | - |
AB688_RS00825 () | 195107..196375 | - | 1269 | WP_054891184.1 | malate dehydrogenase | - |
AB688_RS00830 () | 196551..197378 | - | 828 | WP_063541609.1 | thermonuclease family protein | - |
AB688_RS00835 () | 197381..197596 | - | 216 | WP_054891182.1 | 50S ribosomal protein L31 | - |
AB688_RS00840 () | 197764..199983 | + | 2220 | WP_063541611.1 | primosomal protein N' | - |
AB688_RS00845 () | 200116..201852 | + | 1737 | WP_054891180.1 | arginine--tRNA ligase | - |
AB688_RS00850 () | 201854..202552 | + | 699 | WP_063541613.1 | SPOR domain-containing protein | - |
AB688_RS00855 () | 202599..203018 | - | 420 | WP_063541615.1 | TM2 domain-containing protein | - |
AB688_RS00860 () | 203187..203819 | + | 633 | WP_054891178.1 | Murein DD-endopeptidase MepH | VF |
AB688_RS00865 () | 203875..204876 | - | 1002 | WP_063541617.1 | Twitching mobility protein | VF |
AB688_RS00870 () | 204942..205628 | + | 687 | WP_063541619.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
AB688_RS00875 () | 205667..206485 | + | 819 | WP_054891175.1 | pyrroline-5-carboxylate reductase | - |
AB688_RS00880 () | 206496..207086 | + | 591 | WP_054891174.1 | YggT family protein | - |
AB688_RS00885 () | 207175..208314 | + | 1140 | WP_054891173.1 | homoserine O-acetyltransferase | - |
AB688_RS00890 () | 208322..208942 | + | 621 | WP_063541621.1 | methionine biosynthesis protein MetW | - |
AB688_RS00895 () | 208967..209401 | + | 435 | WP_063541623.1 | DUF4426 domain-containing protein | - |
AB688_RS00900 () | 209398..209994 | + | 597 | WP_054891170.1 | dITP/XTP pyrophosphatase | VF |
AB688_RS00905 () | 209991..211169 | + | 1179 | WP_063541625.1 | radical SAM family heme chaperone HemW | - |
AB688_RS00910 () | 211179..211505 | + | 327 | WP_054891168.1 | DUF3392 family protein | - |
AB688_RS00915 () | 211561..212283 | - | 723 | WP_054891167.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
AB688_RS00920 () | 212293..213087 | - | 795 | WP_008092966.1 | thiazole synthase | - |
AB688_RS00925 () | 213141..213341 | - | 201 | WP_063546598.1 | sulfur carrier protein ThiS | - |
AB688_RS00930 () | 213444..213815 | - | 372 | WP_054891165.1 | DUF423 domain-containing protein | - |
AB688_RS00935 () | 213880..214590 | + | 711 | WP_054891164.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
AB688_RS00940 () | 214669..215523 | - | 855 | WP_063541627.1 | RNA polymerase sigma factor RpoH | - |
AB688_RS00945 () | 215635..216660 | - | 1026 | WP_063541629.1 | permease-like cell division protein FtsX | - |
AB688_RS00950 () | 216657..217328 | - | 672 | WP_011531723.1 | Cell division ATP-binding protein FtsE | VF |
AB688_RS00955 () | 217325..218824 | - | 1500 | WP_063541631.1 | signal recognition particle-docking protein FtsY | - |
AB688_RS00960 () | 219055..220410 | + | 1356 | WP_063541633.1 | insulinase family protein | - |
AB688_RS00965 () | 220403..221902 | + | 1500 | WP_063541635.1 | insulinase family protein | - |
AB688_RS00970 () | 221902..222495 | + | 594 | WP_063541637.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
AB688_RS00975 () | 222544..225303 | + | 2760 | WP_155738177.1 | insulinase family protein | - |
AB688_RS00980 () | 225367..226359 | + | 993 | WP_063541641.1 | hydrolase | - |
AB688_RS00985 () | 226372..227226 | - | 855 | WP_063541643.1 | sulfurtransferase | - |
AB688_RS00990 () | 227261..227926 | - | 666 | WP_054891154.1 | hypothetical protein | VF |
AB688_RS00995 () | 228066..229496 | + | 1431 | WP_063541645.1 | coniferyl aldehyde dehydrogenase | - |
AB688_RS01000 () | 229626..230105 | + | 480 | WP_063541647.1 | Phosphopantetheine adenylyltransferase | VF |
AB688_RS01005 () | 230261..230512 | + | 252 | WP_011531711.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
AB688_RS01010 () | 230512..232194 | + | 1683 | WP_063541649.1 | Glutathione hydrolase proenzyme | VF |
AB688_RS01015 () | 232236..233048 | - | 813 | WP_063541651.1 | bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase | - |
AB688_RS01020 () | 233052..233870 | - | 819 | WP_196759887.1 | HDOD domain-containing protein | - |
AB688_RS01025 () | 234102..235298 | + | 1197 | WP_063541655.1 | class I SAM-dependent rRNA methyltransferase | - |
AB688_RS01030 () | 235422..236477 | - | 1056 | WP_063541657.1 | magnesium transporter | - |
AB688_RS01035 () | 236961..238802 | + | 1842 | WP_054891146.1 | dihydroxy-acid dehydratase | - |
AB688_RS01040 () | 238984..240039 | - | 1056 | WP_196759888.1 | haloacid dehalogenase-like hydrolase | - |
AB688_RS01045 () | 240283..241674 | + | 1392 | WP_063541661.1 | L-cystine transporter | - |
AB688_RS01050 () | 241867..242382 | - | 516 | WP_063541663.1 | dihydrofolate reductase | - |
AB688_RS01055 () | 242437..243828 | + | 1392 | WP_063541665.1 | DUF2868 domain-containing protein | - |
AB688_RS01060 () | 243821..245185 | + | 1365 | WP_063541667.1 | GTPase/DUF3482 domain-containing protein | - |
AB688_RS01065 () | 245427..245975 | - | 549 | WP_063541669.1 | HD domain-containing protein | - |
AB688_RS01070 () | 246027..247046 | - | 1020 | WP_063541671.1 | putative 2-aminoethylphosphonate ABC transporter substrate-binding protein | - |
AB688_RS01075 () | 247076..248800 | - | 1725 | WP_063541673.1 | putative 2-aminoethylphosphonate ABC transporter permease subunit | - |
AB688_RS01080 () | 248802..249860 | - | 1059 | WP_063541675.1 | Sulfate/thiosulfate import ATP-binding protein CysA | VF |
AB688_RS01085 () | 250012..250881 | - | 870 | WP_054891136.1 | HTH-type transcriptional activator CmpR | VF |
AB688_RS01090 () | 250891..253161 | - | 2271 | WP_063541677.1 | heavy metal translocating P-type ATPase | - |
AB688_RS01095 () | 253260..253703 | + | 444 | WP_063541679.1 | cadmium resistance transcriptional regulator CadR | - |
AB688_RS01100 () | 253787..254758 | - | 972 | WP_063541681.1 | thymidylate synthase | - |
AB688_RS01105 () | 254809..255618 | - | 810 | WP_054891132.1 | prolipoprotein diacylglyceryl transferase | - |
AB688_RS01110 () | 255629..256411 | - | 783 | WP_063541683.1 | sulfite exporter TauE/SafE family protein | - |
AB688_RS01115 () | 256542..257291 | + | 750 | WP_063541685.1 | NRDE family protein | - |
AB688_RS01120 () | 257340..259613 | - | 2274 | WP_063541687.1 | phosphoenolpyruvate--protein phosphotransferase | - |
AB688_RS01125 () | 259636..260115 | - | 480 | WP_029614755.1 | RNA pyrophosphohydrolase | - |
AB688_RS01130 () | 260260..260916 | + | 657 | WP_063541689.1 | HAD-IB family hydrolase | - |
AB688_RS01135 () | 260970..261395 | - | 426 | WP_054891127.1 | DUF2269 domain-containing protein | - |
AB688_RS01140 () | 261491..263005 | - | 1515 | WP_063541691.1 | threonine ammonia-lyase, biosynthetic | - |
AB688_RS01145 () | 263140..263814 | + | 675 | WP_054891125.1 | ribose-5-phosphate isomerase RpiA | - |
AB688_RS01150 () | 263939..264850 | - | 912 | WP_063541693.1 | SdiA-regulated domain-containing protein | - |
AB688_RS01155 () | 264939..265859 | - | 921 | WP_063541695.1 | SdiA-regulated domain-containing protein | - |
AB688_RS01160 () | 266015..266680 | - | 666 | WP_063541697.1 | fumarylacetoacetate hydrolase family protein | - |
AB688_RS01165 () | 266709..268106 | - | 1398 | WP_063541699.1 | FAD-binding oxidoreductase | - |
AB688_RS01170 () | 268279..269508 | + | 1230 | WP_063541701.1 | phosphoglycerate dehydrogenase | - |
AB688_RS01175 () | 269619..270095 | - | 477 | WP_054891119.1 | DUF4399 domain-containing protein | - |
AB688_RS01180 () | 270326..270805 | + | 480 | WP_063541703.1 | transporter substrate-binding domain-containing protein | - |
AB688_RS01185 () | 270921..271412 | - | 492 | WP_063541705.1 | DUF523 domain-containing protein | - |
AB688_RS01190 () | 271399..272031 | - | 633 | WP_063546600.1 | 2OG-Fe(II) oxygenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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