MGE detailed information
MGE type: Mobilizable plasmid MGE length: 100873 bp
Accession: NZ_CP011654 Location: 1..100873 Organism: Citrobacter freundii strain CAV1741 Replicon: plasmid pCAV1741-101
Accession: NZ_CP011654 Location: 1..100873 Organism: Citrobacter freundii strain CAV1741 Replicon: plasmid pCAV1741-101
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB183_RS00140 () | 221..1243 | + | 1023 | WP_001572362.1 | IS110 family transposase IS1618 | Transposase |
| AB183_RS00145 () | 1535..1842 | - | 308 | Protein_1 | IS1 family transposase | - |
| AB183_RS00150 () | 2319..3059 | + | 741 | WP_022652310.1 | site-specific integrase | - |
| AB183_RS00155 () | 3385..4374 | - | 990 | WP_022652311.1 | RepB family plasmid replication initiator protein | - |
| AB183_RS00160 () | 5230..5499 | + | 270 | WP_022652312.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| AB183_RS00165 () | 5503..6033 | + | 531 | WP_022652313.1 | GNAT family N-acetyltransferase | Toxin Detail |
| AB183_RS00170 () | 6165..7058 | + | 894 | WP_086538014.1 | IS5 family transposase IS5D | Transposase |
| AB183_RS00175 () | 7199..8095 | - | 897 | Protein_7 | IS3 family transposase ISEhe3 | Transposase |
| AB183_RS00180 () | 8160..9311 | + | 1152 | WP_022652315.1 | IS30 family transposase IS30D | Transposase |
| AB183_RS00185 () | 9420..9803 | + | 384 | WP_001201739.1 | IS66 family transposase IS682 | Transposase |
| AB183_RS00190 () | 9800..10147 | + | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| AB183_RS00195 () | 10197..11732 | + | 1536 | WP_032430836.1 | IS66 family transposase ISSgsp1 | Transposase |
| AB183_RS00200 () | 11789..13129 | - | 1341 | WP_196298534.1 | IS110 family transposase ISWpi13 | Transposase |
| AB183_RS00205 () | 13360..13602 | - | 243 | Protein_13 | IS3 family transposase ISEhe3 | Transposase |
| AB183_RS00210 () | 13973..15139 | + | 1167 | WP_022652317.1 | plasmid-partitioning protein SopA | - |
| AB183_RS00215 () | 15139..16104 | + | 966 | WP_022652318.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| AB183_RS00220 () | 16837..17879 | - | 1043 | Protein_16 | translesion error-prone DNA polymerase V subunit UmuC | - |
| AB183_RS00225 () | 18133..20271 | + | 2139 | WP_022652236.1 | hypothetical protein | - |
| AB183_RS00230 () | 20605..22008 | + | 1404 | WP_072200700.1 | DNA cytosine methyltransferase | - |
| AB183_RS00235 () | 22042..23256 | - | 1215 | WP_022652238.1 | type II site-specific deoxyribonuclease | - |
| AB183_RS00240 () | 23405..25531 | - | 2127 | WP_022652239.1 | tyrosine-type recombinase/integrase | - |
| AB183_RS00245 () | 25515..26519 | - | 1005 | Protein_21 | tyrosine-type recombinase/integrase | - |
| AB183_RS00250 () | 26593..26820 | - | 228 | Protein_22 | DNA polymerase V subunit UmuC | - |
| AB183_RS00255 () | 26820..27242 | - | 423 | WP_022652242.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AB183_RS00260 () | 27422..28093 | - | 672 | WP_022652243.1 | SOS response-associated peptidase family protein | - |
| AB183_RS00265 () | 28453..29130 | + | 678 | WP_032430833.1 | DNA methylase | - |
| AB183_RS00270 () | 29130..29351 | + | 222 | WP_022652245.1 | hypothetical protein | - |
| AB183_RS00275 () | 29362..29781 | + | 420 | WP_016479994.1 | DUF1380 domain-containing protein | - |
| AB183_RS00280 () | 29835..30614 | + | 780 | WP_032430832.1 | hypothetical protein | - |
| AB183_RS00285 () | 31021..31527 | + | 507 | WP_015062672.1 | antirestriction protein ArdA | - |
| AB183_RS00290 () | 31570..31761 | + | 192 | WP_022652248.1 | hypothetical protein | - |
| AB183_RS00295 () | 31953..32207 | + | 255 | WP_072200699.1 | DNA polymerase III subunit theta | - |
| AB183_RS00300 () | 32242..32559 | + | 318 | WP_032430831.1 | hypothetical protein | - |
| AB183_RS27590 () | 32682..32903 | - | 222 | WP_015062665.1 | hypothetical protein | - |
| AB183_RS00310 () | 33234..33788 | + | 555 | WP_020842505.1 | single-stranded DNA-binding protein | - |
| AB183_RS00315 () | 33841..34083 | + | 243 | WP_032430848.1 | DUF905 domain-containing protein | - |
| AB183_RS00320 () | 34154..36187 | + | 2034 | Protein_36 | ParB/RepB/Spo0J family partition protein | - |
| AB183_RS00325 () | 36228..36662 | + | 435 | WP_086538015.1 | conjugation system SOS inhibitor PsiB | - |
| AB183_RS00330 () | 36659..37387 | + | 729 | WP_032430829.1 | plasmid SOS inhibition protein A | - |
| AB183_RS00335 () | 37384..37737 | + | 354 | WP_020833567.1 | hypothetical protein | - |
| AB183_RS00340 () | 38091..38465 | + | 375 | WP_020833566.1 | hypothetical protein | - |
| AB183_RS00345 () | 39191..39595 | + | 405 | WP_032430828.1 | hypothetical protein | - |
| AB183_RS00350 () | 39652..39999 | + | 348 | WP_032430827.1 | hypothetical protein | - |
| AB183_RS00355 () | 40094..40240 | + | 147 | WP_001159045.1 | hypothetical protein | - |
| AB183_RS00360 () | 40287..41120 | + | 834 | WP_032430826.1 | type I restriction-modification system subunit M | - |
| AB183_RS00365 () | 41767..42297 | + | 531 | WP_032430825.1 | antirestriction protein | - |
| AB183_RS00370 () | 42308..42763 | - | 456 | WP_032430824.1 | hypothetical protein | VF |
| AB183_RS00375 () | 43232..43615 | + | 384 | WP_015062650.1 | relaxosome protein TraM | - |
| AB183_RS00380 () | 43912..44361 | + | 450 | WP_020833561.1 | helix-turn-helix domain-containing protein | - |
| AB183_RS00385 () | 44567..44800 | + | 234 | WP_032430823.1 | TraY domain-containing protein | - |
| AB183_RS00390 () | 44918..45277 | + | 360 | WP_032430822.1 | type IV conjugative transfer system pilin TraA | - |
| AB183_RS00395 () | 45279..45584 | + | 306 | WP_000398849.1 | type IV conjugative transfer system protein TraL | - |
| AB183_RS00400 () | 45604..46167 | + | 564 | WP_032430821.1 | type IV conjugative transfer system protein TraE | - |
| AB183_RS00405 () | 46157..46897 | + | 741 | WP_047715685.1 | type-F conjugative transfer system secretin TraK | - |
| AB183_RS00410 () | 46884..48245 | + | 1362 | WP_032430819.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| AB183_RS00415 () | 48355..48574 | + | 220 | Protein_55 | TraR/DksA C4-type zinc finger protein | - |
| AB183_RS00420 () | 48587..49039 | + | 453 | WP_032430818.1 | hypothetical protein | - |
| AB183_RS00425 () | 49057..49656 | + | 600 | WP_047715683.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AB183_RS00430 () | 49667..52258 | + | 2592 | WP_032430816.1 | type IV secretion system protein TraC | - |
| AB183_RS00435 () | 52255..52719 | + | 465 | WP_032430815.1 | type-F conjugative transfer system protein TrbI | - |
| AB183_RS00440 () | 52719..53354 | + | 636 | WP_032430814.1 | type-F conjugative transfer system protein TraW | - |
| AB183_RS00445 () | 53351..54346 | + | 996 | WP_032430813.1 | conjugal transfer pilus assembly protein TraU | - |
| AB183_RS00450 () | 54357..54725 | + | 369 | WP_032430812.1 | hypothetical protein | - |
| AB183_RS00455 () | 54722..55336 | + | 615 | WP_032430811.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AB183_RS00460 () | 55333..57186 | + | 1854 | WP_032430810.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AB183_RS00465 () | 57183..57962 | + | 780 | WP_032430809.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AB183_RS00470 () | 57988..58599 | + | 612 | WP_032430808.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AB183_RS00475 () | 58599..59960 | + | 1362 | WP_032430807.1 | F-type conjugal transfer protein TraH | - |
| AB183_RS00480 () | 59962..62859 | + | 2898 | WP_047715678.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AB183_RS00485 () | 62871..63232 | + | 362 | Protein_69 | protein traS | - |
| AB183_RS00490 () | 63255..63860 | - | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| AB183_RS00495 () | 63955..66852 | + | 2898 | WP_004206881.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| AB183_RS27900 () | 66929..68309 | + | 1381 | Protein_72 | hypothetical protein | - |
| AB183_RS00510 () | 68306..69403 | + | 1098 | Protein_73 | hypothetical protein | - |
| AB183_RS00515 () | 69437..70405 | + | 969 | WP_013087110.1 | IS5 family transposase IS903B | Transposase |
| AB183_RS00520 () | 70431..70643 | - | 213 | WP_022652265.1 | hypothetical protein | - |
| AB183_RS00525 () | 70792..71823 | - | 1032 | WP_001395480.1 | IS630 family transposase ISEc33 | Transposase |
| AB183_RS00530 () | 72099..72629 | - | 531 | WP_008322250.1 | thermonuclease family protein | - |
| AB183_RS00535 () | 72634..72831 | - | 198 | WP_008322246.1 | hypothetical protein | - |
| AB183_RS00545 () | 73337..74368 | + | 1032 | WP_008322245.1 | LacI family transcriptional regulator | - |
| AB183_RS00550 () | 74655..75608 | + | 954 | WP_008322243.1 | ABC transporter substrate-binding protein | - |
| AB183_RS00555 () | 75673..77205 | + | 1533 | WP_008322240.1 | Ribose import ATP-binding protein RbsA | VF |
| AB183_RS00560 () | 77192..78211 | + | 1020 | WP_004113181.1 | ribose ABC transporter permease | - |
| AB183_RS00565 () | 78289..79659 | + | 1371 | WP_008322237.1 | hypothetical protein | - |
| AB183_RS00570 () | 79656..80576 | + | 921 | WP_008322235.1 | carbohydrate kinase | - |
| AB183_RS27595 () | 80759..80928 | - | 170 | Protein_85 | DUF596 domain-containing protein | - |
| AB183_RS00575 () | 81122..81538 | - | 417 | WP_008322233.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AB183_RS00580 () | 81535..81765 | - | 231 | WP_001261276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AB183_RS00585 () | 82018..83040 | - | 1023 | WP_008322227.1 | helicase UvrD | - |
| AB183_RS00590 () | 83126..83830 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AB183_RS00595 () | 84157..84657 | + | 501 | WP_001752509.1 | non-heme ferritin-like protein | - |
| AB183_RS27610 () | 84776..86004 | + | 1229 | WP_148116659.1 | IS3 family transposase ISEc27 | Transposase |
| AB183_RS00610 () | 86310..87290 | - | 981 | WP_047715662.1 | IS5 family transposase ISKpn26 | Transposase |
| AB183_RS00615 () | 87568..87849 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| AB183_RS00620 () | 87830..88159 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AB183_RS00625 () | 88763..89767 | - | 1005 | WP_022542389.1 | IS110 family transposase IS4321 | Transposase |
| AB183_RS00630 () | 89955..90563 | + | 609 | WP_004393990.1 | TetR/AcrR family transcriptional regulator | - |
| AB183_RS00635 () | 90560..91711 | + | 1152 | WP_032430843.1 | efflux RND transporter periplasmic adaptor subunit | - |
| AB183_RS00640 () | 91708..92913 | + | 1206 | WP_022652303.1 | ABC transporter permease | - |
| AB183_RS00645 () | 92915..93625 | + | 711 | WP_022652302.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| AB183_RS28225 () | 93654..94181 | + | 528 | WP_022652301.1 | hypothetical protein | - |
| AB183_RS00655 () | 94246..95199 | + | 954 | WP_032430842.1 | IS110 family transposase IS4321 | Transposase |
| AB183_RS00660 () | 95790..96299 | + | 510 | WP_050483874.1 | sigma-70 family RNA polymerase sigma factor | - |
| AB183_RS00665 () | 96456..97457 | + | 1002 | Protein_103 | permease | - |
| AB183_RS00670 () | 97471..97701 | + | 231 | WP_021314637.1 | thioredoxin family protein | - |
| AB183_RS00675 () | 97979..98182 | - | 204 | WP_022652307.1 | hypothetical protein | - |
| AB183_RS00680 () | 98264..99091 | - | 828 | WP_032430841.1 | universal stress protein | - |
| AB183_RS00685 () | 99109..100587 | - | 1479 | WP_022652309.1 | SulP family inorganic anion transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|