MGE detailed information
MGE type: Conjugative plasmid MGE length: 135117 bp
Accession: NZ_CP011610 Location: 1..135117 Organism: Citrobacter freundii strain CAV1321 Replicon: plasmid pCAV1321-135
Accession: NZ_CP011610 Location: 1..135117 Organism: Citrobacter freundii strain CAV1321 Replicon: plasmid pCAV1321-135
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB180_RS00810 () | 869..1111 | - | 243 | WP_032430848.1 | DUF905 domain-containing protein | - |
| AB180_RS00815 () | 1164..1718 | - | 555 | WP_020842505.1 | single-stranded DNA-binding protein | - |
| AB180_RS28125 () | 2049..2270 | + | 222 | WP_015062665.1 | hypothetical protein | - |
| AB180_RS00825 () | 2393..2710 | - | 318 | WP_032430831.1 | hypothetical protein | - |
| AB180_RS00830 () | 2745..2999 | - | 255 | WP_072200699.1 | DNA polymerase III subunit theta | - |
| AB180_RS00835 () | 3191..3382 | - | 192 | WP_022652248.1 | hypothetical protein | - |
| AB180_RS00840 () | 3425..3931 | - | 507 | WP_015062672.1 | antirestriction protein ArdA | - |
| AB180_RS00845 () | 4338..5117 | - | 780 | WP_032430832.1 | hypothetical protein | - |
| AB180_RS00850 () | 5171..5590 | - | 420 | WP_016479994.1 | DUF1380 domain-containing protein | - |
| AB180_RS00855 () | 5601..5822 | - | 222 | WP_022652245.1 | hypothetical protein | - |
| AB180_RS00860 () | 5822..6499 | - | 678 | WP_032430833.1 | DNA methylase | - |
| AB180_RS00865 () | 6859..7530 | + | 672 | WP_022652243.1 | SOS response-associated peptidase family protein | - |
| AB180_RS00870 () | 7710..8132 | + | 423 | WP_022652242.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AB180_RS00875 () | 8132..8359 | + | 228 | Protein_14 | DNA polymerase V subunit UmuC | - |
| AB180_RS00880 () | 8433..9437 | + | 1005 | Protein_15 | tyrosine-type recombinase/integrase | - |
| AB180_RS00885 () | 9421..11547 | + | 2127 | WP_022652239.1 | tyrosine-type recombinase/integrase | - |
| AB180_RS00890 () | 11696..12910 | + | 1215 | WP_022652238.1 | type II site-specific deoxyribonuclease | - |
| AB180_RS00895 () | 12944..14347 | - | 1404 | WP_072200700.1 | DNA cytosine methyltransferase | - |
| AB180_RS00900 () | 14681..16819 | - | 2139 | WP_022652236.1 | hypothetical protein | - |
| AB180_RS00905 () | 17073..18115 | + | 1043 | Protein_20 | translesion error-prone DNA polymerase V subunit UmuC | - |
| AB180_RS00910 () | 18848..19813 | - | 966 | WP_022652318.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| AB180_RS00915 () | 19813..20979 | - | 1167 | WP_022652317.1 | plasmid-partitioning protein SopA | - |
| AB180_RS00920 () | 21350..21592 | + | 243 | Protein_23 | IS3 family transposase ISEhe3 | Transposase |
| AB180_RS00925 () | 21823..23163 | + | 1341 | WP_196298534.1 | IS110 family transposase ISWpi13 | Transposase |
| AB180_RS00930 () | 23220..24755 | - | 1536 | WP_032430836.1 | IS66 family transposase ISSgsp1 | Transposase |
| AB180_RS00935 () | 24805..25152 | - | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| AB180_RS00940 () | 25149..25532 | - | 384 | WP_001201739.1 | IS66 family transposase IS682 | Transposase |
| AB180_RS00945 () | 25641..26792 | - | 1152 | WP_022652315.1 | IS30 family transposase IS30D | Transposase |
| AB180_RS00950 () | 26857..27753 | + | 897 | Protein_29 | IS3 family transposase ISEhe3 | Transposase |
| AB180_RS00955 () | 27894..28787 | - | 894 | WP_086538014.1 | IS5 family transposase IS5D | Transposase |
| AB180_RS00960 () | 28919..29449 | - | 531 | WP_022652313.1 | GNAT family N-acetyltransferase | Toxin Detail |
| AB180_RS00965 () | 29453..29722 | - | 270 | WP_022652312.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| AB180_RS00970 () | 30578..31567 | + | 990 | WP_022652311.1 | RepB family plasmid replication initiator protein | - |
| AB180_RS00975 () | 31893..32633 | - | 741 | WP_022652310.1 | site-specific integrase | - |
| AB180_RS00980 () | 33110..33417 | + | 308 | Protein_35 | IS1 family transposase | - |
| AB180_RS00985 () | 33709..34731 | - | 1023 | WP_001572362.1 | IS110 family transposase IS1618 | Transposase |
| AB180_RS00990 () | 35238..36716 | + | 1479 | WP_022652309.1 | SulP family inorganic anion transporter | - |
| AB180_RS00995 () | 36734..37561 | + | 828 | WP_032430841.1 | universal stress protein | - |
| AB180_RS01000 () | 37643..37846 | + | 204 | WP_022652307.1 | hypothetical protein | - |
| AB180_RS01005 () | 38124..38354 | - | 231 | WP_021314637.1 | thioredoxin family protein | - |
| AB180_RS01010 () | 38368..39369 | - | 1002 | Protein_41 | permease | - |
| AB180_RS01015 () | 39526..40035 | - | 510 | WP_050483874.1 | sigma-70 family RNA polymerase sigma factor | - |
| AB180_RS01020 () | 40626..41579 | - | 954 | WP_032430842.1 | IS110 family transposase IS4321 | Transposase |
| AB180_RS28920 () | 41644..42171 | - | 528 | WP_022652301.1 | hypothetical protein | - |
| AB180_RS01030 () | 42200..42910 | - | 711 | WP_022652302.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| AB180_RS01035 () | 42912..44117 | - | 1206 | WP_022652303.1 | ABC transporter permease | - |
| AB180_RS01040 () | 44114..45265 | - | 1152 | WP_032430843.1 | efflux RND transporter periplasmic adaptor subunit | - |
| AB180_RS01045 () | 45262..45870 | - | 609 | WP_004393990.1 | TetR/AcrR family transcriptional regulator | - |
| AB180_RS01050 () | 46058..47062 | + | 1005 | WP_022542389.1 | IS110 family transposase IS4321 | Transposase |
| AB180_RS01055 () | 47666..47995 | + | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AB180_RS01060 () | 47976..48257 | + | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| AB180_RS01065 () | 48535..49515 | + | 981 | WP_047715662.1 | IS5 family transposase ISKpn26 | Transposase |
| AB180_RS01080 () | 51168..51668 | - | 501 | WP_001752509.1 | non-heme ferritin-like protein | - |
| AB180_RS01085 () | 51995..52699 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AB180_RS01090 () | 52764..55307 | + | 2544 | Protein_56 | Tn3 family transposase ISEc63 | Transposase |
| AB180_RS01095 () | 55596..55952 | - | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| AB180_RS01100 () | 56355..57059 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AB180_RS01105 () | 57145..58167 | + | 1023 | WP_008322227.1 | helicase UvrD | - |
| AB180_RS01110 () | 58420..58650 | + | 231 | WP_001261276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AB180_RS01115 () | 58647..59063 | + | 417 | WP_008322233.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AB180_RS28170 () | 59257..59426 | + | 170 | Protein_62 | DUF596 domain-containing protein | - |
| AB180_RS01120 () | 59609..60529 | - | 921 | WP_008322235.1 | carbohydrate kinase | - |
| AB180_RS01125 () | 60526..61896 | - | 1371 | WP_008322237.1 | hypothetical protein | - |
| AB180_RS01130 () | 61974..62993 | - | 1020 | WP_004113181.1 | ribose ABC transporter permease | - |
| AB180_RS01135 () | 62980..64512 | - | 1533 | WP_008322240.1 | Ribose import ATP-binding protein RbsA | VF |
| AB180_RS01140 () | 64577..65530 | - | 954 | WP_008322243.1 | ABC transporter substrate-binding protein | - |
| AB180_RS01145 () | 65817..66848 | - | 1032 | WP_008322245.1 | LacI family transcriptional regulator | - |
| AB180_RS01155 () | 67354..67551 | + | 198 | WP_008322246.1 | hypothetical protein | - |
| AB180_RS01160 () | 67556..68086 | + | 531 | WP_008322250.1 | thermonuclease family protein | - |
| AB180_RS01170 () | 68362..69393 | + | 1032 | WP_001395480.1 | IS630 family transposase ISEc33 | Transposase |
| AB180_RS01175 () | 69542..69754 | + | 213 | WP_022652265.1 | hypothetical protein | - |
| AB180_RS01180 () | 69780..70748 | - | 969 | WP_013087110.1 | IS5 family transposase IS903B | Transposase |
| AB180_RS01185 () | 70782..71879 | - | 1098 | Protein_74 | hypothetical protein | - |
| AB180_RS28535 () | 71876..73256 | - | 1381 | Protein_75 | hypothetical protein | - |
| AB180_RS01200 () | 73445..74428 | + | 984 | WP_022652268.1 | tyrosine-type recombinase/integrase | - |
| AB180_RS01205 () | 74522..74977 | - | 456 | WP_001166628.1 | IS607 family transposase ISChh1 | Transposase |
| AB180_RS01210 () | 75049..75429 | + | 381 | WP_001294654.1 | mercuric ion transporter MerT | - |
| AB180_RS01215 () | 75445..75720 | + | 276 | WP_000732275.1 | mercury resistance system periplasmic binding protein MerP | - |
| AB180_RS01220 () | 75748..76173 | + | 426 | WP_000522996.1 | organomercurial transporter MerC | - |
| AB180_RS01225 () | 76212..77897 | + | 1686 | WP_043907010.1 | mercury(II) reductase | - |
| AB180_RS01230 () | 77915..78280 | + | 366 | WP_001277466.1 | mercury resistance co-regulator MerD | - |
| AB180_RS01235 () | 78277..78513 | + | 237 | WP_022652270.1 | broad-spectrum mercury transporter MerE | - |
| AB180_RS01240 () | 78579..78791 | + | 213 | WP_000993245.1 | DUF3330 domain-containing protein | - |
| AB180_RS01245 () | 79012..81909 | - | 2898 | WP_004206881.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| AB180_RS01250 () | 82004..82609 | + | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| AB180_RS01255 () | 82669..83103 | + | 435 | WP_071846007.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| AB180_RS28925 () | 83137..83451 | - | 315 | Protein_88 | Tetracycline repressor protein class D | VF |
| AB180_RS01260 () | 83449..84030 | - | 582 | Protein_89 | Tetracycline repressor protein class D | VF |
| AB180_RS01265 () | 84126..85310 | + | 1185 | WP_001039466.1 | Tetracycline resistance protein, class B | ARG |
| AB180_RS01270 () | 85405..85665 | + | 261 | Protein_91 | alcohol dehydrogenase catalytic domain-containing protein | - |
| AB180_RS01275 () | 85943..86296 | + | 354 | WP_001114073.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| AB180_RS01280 () | 86344..86706 | + | 363 | WP_000783215.1 | arsenite efflux transporter metallochaperone ArsD | - |
| AB180_RS01285 () | 86724..88475 | + | 1752 | WP_001556710.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| AB180_RS01290 () | 88524..89813 | + | 1290 | WP_000922630.1 | arsenite efflux transporter membrane subunit ArsB | - |
| AB180_RS01295 () | 89826..90251 | + | 426 | WP_000065758.1 | glutaredoxin-dependent arsenate reductase | - |
| AB180_RS01300 () | 90282..90686 | - | 405 | WP_004118313.1 | arsenic transporter ATPase | - |
| AB180_RS01305 () | 90695..91267 | - | 573 | WP_001556711.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| AB180_RS01310 () | 91431..94439 | + | 3009 | WP_012817690.1 | Tn3 family transposase ISEc63 | Transposase |
| AB180_RS01315 () | 94473..94940 | - | 468 | Protein_100 | replication initiator protein RepA | - |
| AB180_RS26645 () | 94933..95010 | - | 78 | WP_071846009.1 | RepA leader peptide Tap | - |
| AB180_RS01320 () | 95243..95485 | - | 243 | WP_000078032.1 | replication regulatory protein RepA | - |
| AB180_RS01325 () | 95617..96180 | - | 564 | WP_047715669.1 | Phospholipase D | VF |
| AB180_RS01330 () | 96329..96682 | - | 354 | WP_047715670.1 | hypothetical protein | - |
| AB180_RS01335 () | 96724..97455 | - | 732 | WP_047715671.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| AB180_RS01340 () | 97452..98018 | - | 567 | WP_047715672.1 | DUF2726 domain-containing protein | - |
| AB180_RS01345 () | 98037..103340 | - | 5304 | WP_047715673.1 | Multifunctional conjugation protein TraI | Relaxase |
| AB180_RS01350 () | 103340..105574 | - | 2235 | WP_047715674.1 | type IV conjugative transfer system coupling protein TraD | - |
| AB180_RS01355 () | 105725..106462 | - | 738 | WP_047715675.1 | complement resistance protein TraT | - |
| AB180_RS01360 () | 106638..107198 | - | 561 | WP_047715676.1 | hypothetical protein | - |
| AB180_RS01365 () | 107210..110107 | - | 2898 | WP_047715678.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AB180_RS01370 () | 110109..111470 | - | 1362 | WP_032430807.1 | F-type conjugal transfer protein TraH | - |
| AB180_RS01375 () | 111470..112081 | - | 612 | WP_032430808.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AB180_RS01380 () | 112107..112886 | - | 780 | WP_032430809.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AB180_RS01385 () | 112883..114736 | - | 1854 | WP_032430810.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AB180_RS01390 () | 114733..115347 | - | 615 | WP_032430811.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AB180_RS01395 () | 115344..115712 | - | 369 | WP_032430812.1 | hypothetical protein | - |
| AB180_RS01400 () | 115723..116718 | - | 996 | WP_032430813.1 | conjugal transfer pilus assembly protein TraU | - |
| AB180_RS01405 () | 116715..117350 | - | 636 | WP_032430814.1 | type-F conjugative transfer system protein TraW | - |
| AB180_RS01410 () | 117350..117814 | - | 465 | WP_032430815.1 | type-F conjugative transfer system protein TrbI | - |
| AB180_RS01415 () | 117811..120402 | - | 2592 | WP_032430816.1 | type IV secretion system protein TraC | - |
| AB180_RS01420 () | 120413..121012 | - | 600 | WP_047715683.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AB180_RS01425 () | 121030..121482 | - | 453 | WP_032430818.1 | hypothetical protein | - |
| AB180_RS01430 () | 121495..121714 | - | 220 | Protein_124 | TraR/DksA C4-type zinc finger protein | - |
| AB180_RS01435 () | 121824..123185 | - | 1362 | WP_032430819.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| AB180_RS01440 () | 123172..123912 | - | 741 | WP_047715685.1 | type-F conjugative transfer system secretin TraK | - |
| AB180_RS01445 () | 123902..124465 | - | 564 | WP_032430821.1 | type IV conjugative transfer system protein TraE | - |
| AB180_RS01450 () | 124485..124790 | - | 306 | WP_000398849.1 | type IV conjugative transfer system protein TraL | - |
| AB180_RS01455 () | 124792..125151 | - | 360 | WP_032430822.1 | type IV conjugative transfer system pilin TraA | - |
| AB180_RS01460 () | 125269..125502 | - | 234 | WP_032430823.1 | TraY domain-containing protein | - |
| AB180_RS01465 () | 125708..126157 | - | 450 | WP_020833561.1 | helix-turn-helix domain-containing protein | - |
| AB180_RS01470 () | 126454..126837 | - | 384 | WP_015062650.1 | relaxosome protein TraM | - |
| AB180_RS01475 () | 127306..127761 | + | 456 | WP_032430824.1 | hypothetical protein | VF |
| AB180_RS01480 () | 127772..128302 | - | 531 | WP_032430825.1 | antirestriction protein | - |
| AB180_RS01485 () | 128949..129782 | - | 834 | WP_032430826.1 | type I restriction-modification system subunit M | - |
| AB180_RS01490 () | 129829..129975 | - | 147 | WP_001159045.1 | hypothetical protein | - |
| AB180_RS01495 () | 130070..130417 | - | 348 | WP_032430827.1 | hypothetical protein | - |
| AB180_RS01500 () | 130474..130878 | - | 405 | WP_032430828.1 | hypothetical protein | - |
| AB180_RS01505 () | 131604..131978 | - | 375 | WP_020833566.1 | hypothetical protein | - |
| AB180_RS01510 () | 132332..132685 | - | 354 | WP_020833567.1 | hypothetical protein | - |
| AB180_RS01515 () | 132682..133410 | - | 729 | WP_032430829.1 | plasmid SOS inhibition protein A | - |
| AB180_RS01520 () | 133407..133841 | - | 435 | WP_086538015.1 | conjugation system SOS inhibitor PsiB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|