MGE detailed information
MGE type: Conjugative plasmid MGE length: 130719 bp
Accession: NZ_CP011577 Location: 1..130719 Organism: Klebsiella pneumoniae strain CAV1392 Replicon: plasmid pCAV1392-131
Accession: NZ_CP011577 Location: 1..130719 Organism: Klebsiella pneumoniae strain CAV1392 Replicon: plasmid pCAV1392-131
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABY63_RS00580 () | 1056..1946 | + | 891 | WP_001378118.1 | copper resistance outer membrane transporter PcoB | - |
| ABY63_RS00585 () | 1986..2366 | + | 381 | WP_000025662.1 | copper resistance system metallochaperone PcoC | - |
| ABY63_RS00590 () | 2371..3300 | + | 930 | WP_004118344.1 | copper resistance inner membrane protein PcoD | - |
| ABY63_RS00595 () | 3355..4035 | + | 681 | WP_001188930.1 | Transcriptional activator protein CopR | VF |
| ABY63_RS00600 () | 4032..4967 | + | 936 | WP_077257828.1 | heavy metal sensor histidine kinase | - |
| ABY63_RS00605 () | 5006..5986 | - | 981 | WP_000019473.1 | IS5 family transposase ISKpn26 | Transposase |
| ABY63_RS00610 () | 6245..6942 | - | 698 | Protein_7 | IS1 family transposase IS1X2 | Transposase |
| ABY63_RS29895 () | 7127..7243 | - | 117 | Protein_8 | transposase domain-containing protein | - |
| ABY63_RS29900 () | 7188..7451 | - | 264 | WP_004118209.1 | transposase | - |
| ABY63_RS29905 () | 7466..7729 | + | 264 | WP_004118208.1 | hypothetical protein | - |
| ABY63_RS00630 () | 7973..8254 | + | 282 | WP_004152118.1 | helix-turn-helix domain-containing protein | - |
| ABY63_RS00635 () | 8289..8858 | + | 570 | WP_004152117.1 | Spore protein SP21 | VF |
| ABY63_RS00640 () | 8973..11768 | + | 2796 | WP_004152116.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| ABY63_RS00645 () | 11768..11965 | + | 198 | WP_004152115.1 | hypothetical protein | - |
| ABY63_RS00650 () | 12203..12952 | + | 750 | WP_009483782.1 | phosphate-starvation-inducible PsiE family protein | - |
| ABY63_RS00655 () | 12939..13901 | + | 963 | WP_004152113.1 | M48 family metalloprotease | - |
| ABY63_RS29910 () | 13989..15243 | + | 1255 | Protein_17 | IS3 family transposase ISKpn38 | Transposase |
| ABY63_RS00670 () | 15744..17090 | - | 1347 | WP_020314316.1 | ISNCY family transposase ISLad2 | Transposase |
| ABY63_RS00675 () | 17302..17784 | - | 483 | WP_003026803.1 | GNAT family N-acetyltransferase | Toxin Detail |
| ABY63_RS00680 () | 17772..18038 | - | 267 | WP_003026799.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| ABY63_RS00685 () | 18214..18468 | - | 255 | WP_004152108.1 | hypothetical protein | - |
| ABY63_RS00690 () | 18544..18801 | - | 258 | WP_004152107.1 | hypothetical protein | - |
| ABY63_RS00695 () | 18850..19053 | - | 204 | WP_004152106.1 | hemolysin expression modulator Hha | - |
| ABY63_RS00700 () | 19087..19455 | - | 369 | WP_004152105.1 | hypothetical protein | - |
| ABY63_RS00705 () | 19499..19993 | - | 495 | WP_004152104.1 | DNA-binding protein | - |
| ABY63_RS00710 () | 20024..20542 | - | 519 | WP_016197602.1 | hypothetical protein | - |
| ABY63_RS00715 () | 20634..21338 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| ABY63_RS00720 () | 21393..22538 | + | 1146 | Protein_28 | TerB family tellurite resistance protein | - |
| ABY63_RS00725 () | 22542..23858 | + | 1317 | WP_004152291.1 | ATP-binding protein | - |
| ABY63_RS00730 () | 23855..26050 | + | 2196 | WP_000093087.1 | DEAD/DEAH box helicase | - |
| ABY63_RS00745 () | 27497..28354 | - | 858 | WP_004152292.1 | incFII family plasmid replication initiator RepA | - |
| ABY63_RS28330 () | 28347..28424 | - | 78 | WP_004171457.1 | RepA leader peptide Tap | - |
| ABY63_RS00750 () | 28641..28919 | - | 279 | WP_004199332.1 | replication regulatory protein RepA | - |
| ABY63_RS00755 () | 29240..29719 | - | 480 | WP_009485932.1 | Phospholipase D | VF |
| ABY63_RS00760 () | 30060..30338 | - | 279 | WP_004152296.1 | bacteriocin immunity protein | - |
| ABY63_RS00765 () | 30340..32661 | - | 2322 | WP_004178051.1 | klebicin B-related nuclease bacteriocin | - |
| ABY63_RS00775 () | 33018..33563 | + | 546 | WP_004178052.1 | hypothetical protein | - |
| ABY63_RS00780 () | 33778..34125 | - | 348 | WP_004152301.1 | hypothetical protein | - |
| ABY63_RS00785 () | 34145..34741 | - | 597 | WP_004178053.1 | fertility inhibition protein FinO | - |
| ABY63_RS00790 () | 34899..35624 | - | 726 | WP_004152303.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| ABY63_RS00795 () | 35704..40965 | - | 5262 | WP_004153029.1 | Multifunctional conjugation protein TraI | Relaxase |
| ABY63_RS00800 () | 40965..43274 | - | 2310 | Protein_42 | type IV conjugative transfer system coupling protein TraD | - |
| ABY63_RS00805 () | 43634..44365 | - | 732 | WP_004152629.1 | complement resistance protein TraT | - |
| ABY63_RS00810 () | 44555..45083 | - | 529 | Protein_44 | conjugal transfer protein TraS | - |
| ABY63_RS00815 () | 45089..47938 | - | 2850 | WP_004178054.1 | conjugal transfer mating pair stabilization protein TraG | - |
| ABY63_RS00820 () | 47938..49308 | - | 1371 | WP_004178055.1 | conjugal transfer protein TraH | - |
| ABY63_RS00825 () | 49295..49723 | - | 429 | WP_004152689.1 | hypothetical protein | - |
| ABY63_RS00830 () | 49716..50288 | - | 573 | WP_004152688.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| ABY63_RS00835 () | 50260..50499 | - | 240 | WP_004152687.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| ABY63_RS00840 () | 50510..51262 | - | 753 | WP_004152686.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| ABY63_RS00845 () | 51283..51609 | - | 327 | WP_004152685.1 | hypothetical protein | - |
| ABY63_RS00855 () | 51837..52073 | - | 237 | WP_004152683.1 | conjugal transfer protein TrbE | - |
| ABY63_RS00860 () | 52105..54060 | - | 1956 | WP_004153093.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| ABY63_RS00865 () | 54108..54746 | - | 639 | WP_004152682.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| ABY63_RS00870 () | 54759..55751 | - | 993 | WP_004178057.1 | conjugal transfer pilus assembly protein TraU | - |
| ABY63_RS00875 () | 55762..56388 | - | 627 | WP_004152590.1 | type-F conjugative transfer system protein TraW | - |
| ABY63_RS00880 () | 56388..56777 | - | 390 | WP_004152591.1 | type-F conjugative transfer system protein TrbI | - |
| ABY63_RS00885 () | 56777..59416 | - | 2640 | WP_004152592.1 | type IV secretion system protein TraC | - |
| ABY63_RS00890 () | 59488..59886 | - | 399 | WP_004153071.1 | hypothetical protein | - |
| ABY63_RS00895 () | 60182..60586 | - | 405 | WP_004152594.1 | hypothetical protein | - |
| ABY63_RS00900 () | 60653..60970 | - | 318 | WP_004152595.1 | hypothetical protein | - |
| ABY63_RS00905 () | 60971..61189 | - | 219 | WP_004171484.1 | hypothetical protein | - |
| ABY63_RS00910 () | 61213..61503 | - | 291 | WP_004152596.1 | hypothetical protein | - |
| ABY63_RS00915 () | 61508..61918 | - | 411 | WP_004152597.1 | lipase chaperone | - |
| ABY63_RS00920 () | 62050..62619 | - | 570 | WP_004152598.1 | type IV conjugative transfer system lipoprotein TraV | - |
| ABY63_RS00925 () | 62642..63238 | - | 597 | WP_004152599.1 | conjugal transfer protein TraP | - |
| ABY63_RS00930 () | 63231..64655 | - | 1425 | WP_004152600.1 | conjugal transfer protein TraB | - |
| ABY63_RS00935 () | 64655..65395 | - | 741 | WP_004152601.1 | type-F conjugative transfer system secretin TraK | - |
| ABY63_RS00940 () | 65382..65948 | - | 567 | WP_004152602.1 | type IV conjugative transfer system protein TraE | - |
| ABY63_RS00945 () | 65968..66273 | - | 306 | WP_004178059.1 | type IV conjugative transfer system protein TraL | - |
| ABY63_RS00950 () | 66287..66655 | - | 369 | WP_004178060.1 | type IV conjugative transfer system pilin TraA | - |
| ABY63_RS00955 () | 66709..67080 | - | 372 | WP_004208838.1 | TraY domain-containing protein | - |
| ABY63_RS28345 () | 67164..67850 | - | 687 | WP_011977735.1 | transcriptional regulator TraJ family protein | - |
| ABY63_RS00965 () | 68073..68465 | - | 393 | WP_004178062.1 | relaxosome protein TraM | - |
| ABY63_RS00970 () | 68899..69384 | + | 486 | WP_004178063.1 | hypothetical protein | VF |
| ABY63_RS28350 () | 69417..69746 | - | 330 | WP_011977736.1 | hypothetical protein | - |
| ABY63_RS00975 () | 69779..70600 | - | 822 | WP_004178064.1 | DUF945 domain-containing protein | - |
| ABY63_RS00985 () | 71434..71847 | - | 414 | WP_004152722.1 | helix-turn-helix domain-containing protein | - |
| ABY63_RS00990 () | 71848..72126 | - | 279 | WP_004152721.1 | helix-turn-helix domain-containing protein | - |
| ABY63_RS00995 () | 72116..72436 | - | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| ABY63_RS01000 () | 72517..72741 | - | 225 | WP_004152719.1 | hypothetical protein | - |
| ABY63_RS01005 () | 72752..72964 | - | 213 | WP_004152718.1 | hypothetical protein | - |
| ABY63_RS01010 () | 73025..73381 | - | 357 | WP_004152717.1 | hypothetical protein | - |
| ABY63_RS01015 () | 74017..74367 | - | 351 | WP_004152758.1 | hypothetical protein | - |
| ABY63_RS01020 () | 74364..74636 | - | 273 | WP_004152759.1 | hypothetical protein | - |
| ABY63_RS01025 () | 75336..75497 | - | 162 | WP_004118124.1 | type I toxin-antitoxin system Hok family toxin | - |
| ABY63_RS01030 () | 75569..76618 | + | 1050 | WP_032448955.1 | IS481 family transposase ISKpn28 | Transposase |
| ABY63_RS01035 () | 76670..77749 | + | 1080 | WP_004220208.1 | IS481 family transposase ISKpn28 | Transposase |
| ABY63_RS01040 () | 77927..78301 | - | 375 | WP_004152638.1 | hypothetical protein | - |
| ABY63_RS01045 () | 78357..78683 | - | 327 | WP_004152639.1 | hypothetical protein | - |
| ABY63_RS01050 () | 78680..79408 | - | 729 | WP_004152640.1 | plasmid SOS inhibition protein A | - |
| ABY63_RS01055 () | 79405..79836 | - | 432 | WP_004152641.1 | conjugation system SOS inhibitor PsiB | - |
| ABY63_RS01060 () | 79903..81939 | - | 2037 | WP_004178066.1 | ParB/RepB/Spo0J family partition protein | - |
| ABY63_RS01065 () | 82009..82257 | - | 249 | WP_004152643.1 | DUF905 domain-containing protein | - |
| ABY63_RS01070 () | 82306..82848 | - | 543 | WP_004152644.1 | single-stranded DNA-binding protein | - |
| ABY63_RS01075 () | 83624..84187 | - | 564 | WP_004152645.1 | methyltransferase | - |
| ABY63_RS01080 () | 84235..85590 | - | 1356 | WP_004178068.1 | DUF3560 domain-containing protein | - |
| ABY63_RS01085 () | 85642..85872 | - | 231 | WP_004198570.1 | hypothetical protein | - |
| ABY63_RS01090 () | 85964..86191 | - | 228 | WP_004178072.1 | hypothetical protein | - |
| ABY63_RS01100 () | 86973..87290 | - | 318 | WP_004118473.1 | hypothetical protein | - |
| ABY63_RS01105 () | 87325..87579 | - | 255 | WP_004152754.1 | DNA polymerase III subunit theta | - |
| ABY63_RS01110 () | 87816..88241 | - | 426 | WP_004118478.1 | antirestriction protein | - |
| ABY63_RS01115 () | 88762..88992 | - | 231 | WP_004152753.1 | hypothetical protein | - |
| ABY63_RS01120 () | 89226..90713 | - | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| ABY63_RS01125 () | 91116..91541 | + | 426 | WP_004178083.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| ABY63_RS01130 () | 91541..92812 | + | 1272 | WP_004152715.1 | Y-family DNA polymerase | - |
| ABY63_RS28405 () | 92891..93106 | + | 216 | Protein_107 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| ABY63_RS01135 () | 93129..94327 | - | 1199 | Protein_108 | IS200-IS605 family transposase IS609 | Transposase |
| ABY63_RS01145 () | 95764..96735 | - | 972 | WP_004152062.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| ABY63_RS01150 () | 96735..97901 | - | 1167 | WP_000523813.1 | Sporulation initiation inhibitor protein Soj | VF |
| ABY63_RS01155 () | 98653..99663 | + | 1011 | WP_004152063.1 | RepB family plasmid replication initiator protein | - |
| ABY63_RS01160 () | 100380..101120 | - | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| ABY63_RS28430 () | 102264..103211 | + | 948 | WP_004152065.1 | sensor domain-containing diguanylate cyclase | - |
| ABY63_RS28435 () | 103242..103550 | - | 309 | Protein_114 | EAL domain-containing protein | - |
| ABY63_RS01170 () | 103570..104538 | + | 969 | WP_011977741.1 | IS5 family transposase IS903B | Transposase |
| ABY63_RS28440 () | 105211..105468 | - | 258 | WP_004197688.1 | hypothetical protein | - |
| ABY63_RS28445 () | 106070..107524 | + | 1455 | WP_020444838.1 | putative cyclic di-GMP phosphodiesterase PdeB | VF |
| ABY63_RS01180 () | 108507..109784 | - | 1278 | WP_004152070.1 | DUF2254 domain-containing protein | - |
| ABY63_RS01185 () | 109847..111844 | - | 1998 | WP_004178088.1 | choline BCCT transporter BetT | - |
| ABY63_RS01190 () | 111996..112693 | - | 698 | Protein_120 | IS1 family transposase IS1X2 | Transposase |
| ABY63_RS01205 () | 114182..114666 | + | 485 | Protein_122 | IS1 family transposase IS1X2 | Transposase |
| ABY63_RS01210 () | 114682..115224 | + | 543 | Protein_123 | ISL3 family transposase ISKpn25 | Transposase |
| ABY63_RS01215 () | 115520..115951 | - | 432 | WP_004178091.1 | silver-binding protein SilE | - |
| ABY63_RS01220 () | 116202..117677 | - | 1476 | WP_003032875.1 | copper/silver sensor histidine kinase SilS | - |
| ABY63_RS01225 () | 117670..118350 | - | 681 | WP_001572351.1 | Transcriptional regulatory protein CusR | VF |
| ABY63_RS01230 () | 118540..119925 | + | 1386 | WP_000475512.1 | Cation efflux system protein CusC | VF |
| ABY63_RS01235 () | 119954..120307 | + | 354 | WP_001246153.1 | cation efflux system protein CusF | - |
| ABY63_RS01240 () | 120421..121713 | + | 1293 | WP_004152079.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| ABY63_RS01245 () | 121724..124870 | + | 3147 | WP_004098958.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| ABY63_RS01250 () | 124957..125397 | + | 441 | WP_000758228.1 | hypothetical protein | - |
| ABY63_RS01255 () | 125524..127971 | + | 2448 | WP_004098955.1 | Ag(+)-translocating P-type ATPase SilP | - |
| ABY63_RS01260 () | 128012..128209 | + | 198 | WP_000843497.1 | DUF2933 domain-containing protein | - |
| ABY63_RS01265 () | 128243..128980 | - | 738 | WP_004118669.1 | Murein DD-endopeptidase MepM | VF |
| ABY63_RS01270 () | 129269..129718 | - | 450 | WP_001023257.1 | copper resistance protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|