MGE detailed information
MGE type: Prophage MGE length: 69082 bp
Accession: NZ_CP011528 Location: 1947328..2016409 Organism: Staphylococcus aureus strain RKI4 Replicon: chromosome
Accession: NZ_CP011528 Location: 1947328..2016409 Organism: Staphylococcus aureus strain RKI4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AA961_RS09730 () | 1942786..1943466 | - | 681 | WP_000645728.1 | phenol-soluble modulin export ABC transporter permease subunit PmtB | - |
| AA961_RS09735 () | 1943467..1944365 | - | 899 | Protein_1841 | phenol-soluble modulin export ABC transporter ATP-binding protein PmtA | - |
| AA961_RS09740 () | 1944362..1944742 | - | 381 | WP_000691584.1 | GntR family transcriptional regulator | - |
| AA961_RS14990 () | 1945001..1945177 | - | 177 | WP_000681968.1 | hypothetical protein | - |
| AA961_RS14995 () | 1945420..1945518 | - | 99 | Protein_1844 | hypothetical protein | - |
| AA961_RS09755 () | 1945718..1947004 | + | 1287 | WP_001068542.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| AA961_RS09765 () | 1947328..1949376 | - | 2049 | WP_053040876.1 | hypothetical protein | VF |
| AA961_RS09770 () | 1949762..1950012 | + | 251 | Protein_1847 | hypothetical protein | VF |
| AA961_RS09775 () | 1950334..1950513 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| AA961_RS15005 () | 1950824..1951084 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| AA961_RS09790 () | 1951137..1951487 | - | 351 | WP_000702262.1 | hypothetical protein | VF |
| AA961_RS09795 () | 1952170..1952619 | + | 450 | WP_000727643.1 | hypothetical protein | VF |
| AA961_RS15010 () | 1952712..1953046 | - | 335 | Protein_1852 | SH3 domain-containing protein | - |
| AA961_RS09805 () | 1953697..1954188 | - | 492 | WP_000920041.1 | hypothetical protein | VF |
| AA961_RS09810 () | 1954379..1955134 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| AA961_RS09815 () | 1955146..1955400 | - | 255 | WP_000611512.1 | phage holin | - |
| AA961_RS15030 () | 1955452..1955559 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - () | 1955481..1955620 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1955481..1955620 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1955481..1955620 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1955481..1955620 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| AA961_RS15035 () | 1955612..1955788 | - | 177 | WP_072357969.1 | putative holin-like toxin | Toxin Detail |
| AA961_RS09830 () | 1955931..1956305 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| AA961_RS09835 () | 1956361..1956648 | - | 288 | WP_001262620.1 | hypothetical protein | - |
| AA961_RS15040 () | 1956694..1956846 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| AA961_RS09845 () | 1956839..1960621 | - | 3783 | WP_000582177.1 | hypothetical protein | - |
| AA961_RS09850 () | 1960637..1962121 | - | 1485 | WP_000567408.1 | phage tail family protein | - |
| AA961_RS09855 () | 1962118..1966647 | - | 4530 | WP_047928553.1 | phage tail tape measure protein | - |
| AA961_RS15825 () | 1966704..1966841 | - | 138 | WP_001549167.1 | hypothetical protein | - |
| AA961_RS09865 () | 1966892..1967242 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| AA961_RS15045 () | 1967292..1967516 | - | 225 | WP_072050172.1 | Ig-like domain-containing protein | - |
| AA961_RS09870 () | 1967558..1968202 | - | 645 | WP_000268741.1 | phage tail protein | - |
| AA961_RS09875 () | 1968203..1968610 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| AA961_RS09880 () | 1968607..1969011 | - | 405 | WP_000114225.1 | HK97 gp10 family phage protein | - |
| AA961_RS09885 () | 1969008..1969370 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| AA961_RS09890 () | 1969354..1969638 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| AA961_RS09895 () | 1969628..1969912 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| AA961_RS09900 () | 1969932..1971077 | - | 1146 | WP_000154555.1 | phage major capsid protein | - |
| AA961_RS09905 () | 1971101..1971838 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| AA961_RS09910 () | 1971822..1973009 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| AA961_RS09915 () | 1973025..1974686 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
| AA961_RS09920 () | 1974683..1975027 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| AA961_RS09925 () | 1975158..1975457 | - | 300 | WP_000988332.1 | HNH endonuclease | - |
| AA961_RS09930 () | 1975689..1976105 | - | 417 | WP_000590124.1 | hypothetical protein | - |
| AA961_RS09935 () | 1976133..1976333 | - | 201 | WP_000265042.1 | DUF1514 family protein | - |
| AA961_RS09940 () | 1976453..1976707 | - | 255 | WP_000370292.1 | DUF1024 family protein | - |
| AA961_RS09945 () | 1976700..1976984 | - | 285 | WP_001105620.1 | hypothetical protein | - |
| AA961_RS09950 () | 1976981..1977430 | - | 450 | WP_000982708.1 | hypothetical protein | - |
| AA961_RS09955 () | 1977495..1977743 | - | 249 | WP_001126836.1 | phi PVL orf 51-like protein | - |
| AA961_RS09960 () | 1977744..1978115 | - | 372 | WP_031929144.1 | phage protein | - |
| AA961_RS09965 () | 1978128..1978532 | - | 405 | WP_000401964.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AA961_RS09970 () | 1978541..1978759 | - | 219 | WP_000338528.1 | hypothetical protein | - |
| AA961_RS09975 () | 1978766..1979650 | - | 885 | WP_000148301.1 | DnaD domain protein | - |
| AA961_RS09980 () | 1979803..1980150 | - | 348 | WP_033855319.1 | single-stranded DNA-binding protein | - |
| AA961_RS09985 () | 1980151..1980720 | - | 570 | WP_072399433.1 | MBL fold metallo-hydrolase | - |
| AA961_RS09990 () | 1980849..1981769 | - | 921 | WP_000138475.1 | recombinase RecT | - |
| AA961_RS09995 () | 1981771..1983714 | - | 1944 | WP_000700557.1 | AAA family ATPase | - |
| AA961_RS15050 () | 1983723..1983986 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| AA961_RS10000 () | 1983995..1984255 | - | 261 | WP_047928555.1 | hypothetical protein ; Integrase | Integrase |
| AA961_RS15055 () | 1984348..1984509 | - | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| AA961_RS10010 () | 1984506..1984826 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| AA961_RS10015 () | 1984885..1985517 | + | 633 | WP_000275058.1 | hypothetical protein | - |
| AA961_RS15060 () | 1985532..1985671 | - | 140 | Protein_1898 | hypothetical protein | - |
| AA961_RS15065 () | 1985702..1985899 | - | 198 | Protein_1899 | hypothetical protein | - |
| AA961_RS10030 () | 1985915..1986667 | - | 753 | WP_024928163.1 | phage antirepressor KilAC domain-containing protein | - |
| AA961_RS10035 () | 1986724..1987263 | + | 540 | WP_000351243.1 | hypothetical protein | - |
| AA961_RS10040 () | 1987287..1987547 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| AA961_RS10045 () | 1987565..1987789 | - | 225 | WP_000338186.1 | DUF739 family protein | - |
| AA961_RS10050 () | 1987948..1988718 | + | 771 | WP_001208482.1 | helix-turn-helix domain-containing protein | - |
| AA961_RS10055 () | 1988918..1989100 | + | 183 | WP_000694772.1 | hypothetical protein | - |
| AA961_RS15070 () | 1989136..1989282 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| AA961_RS10065 () | 1989279..1989893 | - | 615 | WP_000191460.1 | hypothetical protein | - |
| AA961_RS10070 () | 1990001..1991038 | + | 1038 | WP_000857176.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| AA961_RS10075 () | 1991089..1991919 | + | 831 | Protein_1909 | hypothetical protein | VF |
| AA961_RS10080 () | 1992157..1993173 | - | 1017 | WP_000595394.1 | hypothetical protein | VF |
| AA961_RS10085 () | 1993195..1994250 | - | 1056 | WP_031588767.1 | hypothetical protein | VF |
| AA961_RS10090 () | 1994685..1995908 | + | 1224 | WP_000206640.1 | ArgE/DapE family deacylase | - |
| AA961_RS10095 () | 1996280..1997125 | - | 846 | WP_000812008.1 | class I SAM-dependent methyltransferase | - |
| AA961_RS10100 () | 1997187..1998098 | - | 912 | WP_000825510.1 | hypothetical protein | VF |
| AA961_RS10105 () | 1998259..1999566 | + | 1308 | WP_001045078.1 | TrkH family potassium uptake protein | - |
| AA961_RS10110 () | 2001207..2001764 | + | 558 | WP_001035619.1 | DUF4888 domain-containing protein | - |
| AA961_RS10115 () | 2001842..2002642 | - | 801 | WP_031792985.1 | hypothetical protein | VF |
| AA961_RS10120 () | 2003380..2003657 | - | 278 | Protein_1918 | DUF3102 domain-containing protein | - |
| AA961_RS10125 () | 2003799..2004767 | - | 969 | WP_000801979.1 | Abi family protein | - |
| AA961_RS10130 () | 2005188..2005676 | - | 489 | WP_049949340.1 | pathogenicity island protein | - |
| AA961_RS10135 () | 2005859..2006917 | - | 1059 | WP_047928557.1 | phage capsid protein | - |
| AA961_RS10140 () | 2006904..2007110 | - | 207 | WP_047928558.1 | hypothetical protein | - |
| AA961_RS10145 () | 2007335..2007679 | - | 345 | WP_001081424.1 | hypothetical protein | - |
| AA961_RS10150 () | 2008100..2010463 | - | 2364 | WP_047928559.1 | DNA primase | - |
| AA961_RS10155 () | 2010555..2010854 | - | 300 | WP_001103961.1 | DUF1474 family protein | - |
| AA961_RS10160 () | 2010855..2011079 | - | 225 | WP_031912616.1 | hypothetical protein | - |
| AA961_RS15830 () | 2011072..2011218 | - | 147 | WP_162852058.1 | hypothetical protein | - |
| AA961_RS10165 () | 2011215..2011532 | - | 318 | WP_031912617.1 | helix-turn-helix domain-containing protein | - |
| AA961_RS10170 () | 2011546..2012187 | - | 642 | WP_031912618.1 | Bro-N domain-containing protein | - |
| AA961_RS10175 () | 2012184..2012426 | - | 243 | WP_047928560.1 | helix-turn-helix domain-containing protein | - |
| AA961_RS13945 () | 2012559..2013182 | + | 624 | WP_049949256.1 | helix-turn-helix domain-containing protein | - |
| AA961_RS10185 () | 2013192..2014364 | + | 1173 | WP_031912621.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| AA961_RS10190 () | 2014433..2016049 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| AA961_RS10195 () | 2016125..2016409 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| AA961_RS10200 () | 2016584..2017327 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| AA961_RS10205 () | 2017352..2018611 | - | 1260 | WP_031588341.1 | hypothetical protein | - |
| AA961_RS10210 () | 2018808..2019434 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| AA961_RS10215 () | 2019795..2020580 | + | 786 | WP_000867940.1 | carbon-nitrogen family hydrolase | - |
| AA961_RS10220 () | 2021177..2021311 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|