MGE detailed information
MGE type: IScluster/Tn MGE length: 19477 bp
Accession: NZ_CP011511 Location: 1239538..1259014 Organism: Shigella boydii strain ATCC 9210 Replicon: chromosome
Accession: NZ_CP011511 Location: 1239538..1259014 Organism: Shigella boydii strain ATCC 9210 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABE81_RS06910 () | 1234606..1235247 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| ABE81_RS06915 () | 1235303..1236481 | - | 1179 | WP_000173497.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| ABE81_RS06920 () | 1236615..1236909 | + | 295 | Protein_1235 | DNA damage-inducible protein YebG | - |
| ABE81_RS06925 () | 1236976..1237332 | + | 357 | WP_001295500.1 | protein YebF | - |
| ABE81_RS06935 () | 1237659..1238318 | + | 660 | WP_000024738.1 | tellurite resistance TerB family protein | - |
| ABE81_RS06940 () | 1238527..1239513 | + | 987 | Protein_1238 | oligopeptidase B | - |
| ABE81_RS06955 () | 1240811..1241818 | + | 1008 | Protein_1240 | prolyl oligopeptidase family serine peptidase | - |
| ABE81_RS06965 () | 1241844..1243057 | + | 1214 | WP_134810244.1 | IS3 family transposase IS629 | Transposase |
| ABE81_RS06970 () | 1243164..1243826 | - | 663 | WP_000944260.1 | exodeoxyribonuclease X | - |
| ABE81_RS06975 () | 1243850..1244506 | - | 657 | WP_000011642.1 | carbon-nitrogen hydrolase family protein | - |
| ABE81_RS06980 () | 1244608..1244838 | - | 231 | WP_000916761.1 | DNA polymerase III subunit theta | - |
| ABE81_RS06985 () | 1244977..1245351 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| ABE81_RS06990 () | 1245355..1246222 | + | 868 | Protein_1246 | copper homeostasis membrane protein CopD | - |
| ABE81_RS06995 () | 1246235..1246576 | + | 342 | WP_000976476.1 | YebY family protein | - |
| - () | 1246604..1246837 | - | 234 | - | - | Antitoxin Detail |
| - () | 1246733..1246836 | + | 104 | - | - | Toxin Detail |
| ABE81_RS07005 () | 1246958..1247428 | - | 471 | WP_071821702.1 | hypothetical protein ; Integrase | Integrase |
| ABE81_RS07025 () | 1248918..1250019 | + | 1102 | Protein_1250 | IS3 family transposase IS600 | Transposase |
| ABE81_RS07030 () | 1250118..1250567 | - | 450 | Protein_1251 | IS1 family transposase IS1X2 | Transposase |
| ABE81_RS07035 () | 1250614..1252206 | - | 1593 | WP_001072385.1 | IS66 family transposase ISEc43 | Transposase |
| ABE81_RS07040 () | 1252237..1252587 | - | 351 | WP_000624671.1 | IS66 family transposase IS682 | Transposase |
| ABE81_RS07045 () | 1252584..1253003 | - | 420 | WP_000435414.1 | IS66 family transposase IS682 | Transposase |
| ABE81_RS28930 () | 1253089..1253196 | - | 108 | Protein_1255 | cell division inhibition protein DicB | - |
| ABE81_RS07055 () | 1253207..1253626 | - | 420 | WP_078163765.1 | hypothetical protein | - |
| ABE81_RS07060 () | 1254428..1254429 | - | 2 | WP_094189677.1 | IS3 family transposase ISSd1 | Transposase |
| ABE81_RS29750 () | 1254865..1255044 | + | 180 | WP_001039895.1 | hypothetical protein | - |
| ABE81_RS07075 () | 1255045..1256760 | - | 1716 | WP_000026175.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| ABE81_RS07080 () | 1257081..1257197 | + | 117 | WP_000087865.1 | IS3 family transposase ISSd1 | Transposase |
| ABE81_RS07090 () | 1257231..1257928 | + | 698 | Protein_1261 | IS1 family transposase IS1X2 | Transposase |
| ABE81_RS07100 () | 1257945..1259014 | + | 1070 | Protein_1262 | IS3 family transposase IS600 | Transposase |
| ABE81_RS07105 () | 1259546..1260202 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| ABE81_RS07110 () | 1260203..1260394 | - | 192 | WP_000457842.1 | YebW family protein | - |
| ABE81_RS07115 () | 1260499..1260735 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| ABE81_RS07120 () | 1260853..1262292 | - | 1440 | WP_000057025.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|