MGE detailed information
MGE type: IScluster/Tn MGE length: 4943 bp
Accession: NZ_CP011510 Location: 3950275..3955217 Organism: Mycobacterium tuberculosis strain Beijing Replicon: chromosome
Accession: NZ_CP011510 Location: 3950275..3955217 Organism: Mycobacterium tuberculosis strain Beijing Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
TM57_RS18480 () | 3946181..3946891 | - | 711 | WP_003417932.1 | phosphoglycerate mutase family protein | - |
TM57_RS18485 () | 3946965..3947837 | + | 873 | WP_003417929.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
TM57_RS18490 () | 3947908..3950085 | - | 2178 | WP_016330440.1 | PE family protein | - |
TM57_RS21635 () | 3950275..3951616 | - | 1342 | Protein_3633 | ISNCY family transposase ISMav10 | Transposase |
TM57_RS18505 () | 3951828..3952103 | + | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
TM57_RS18510 () | 3952103..3952495 | + | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
TM57_RS18515 () | 3953249..3953914 | + | 666 | Protein_3636 | polyprenyl synthetase family protein | - |
TM57_RS18530 () | 3955270..3955659 | + | 390 | Protein_3638 | polyprenyl synthetase family protein | - |
TM57_RS18535 () | 3955659..3956648 | + | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
TM57_RS18540 () | 3956645..3958483 | + | 1839 | WP_003918607.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
TM57_RS18545 () | 3958492..3959382 | + | 891 | WP_003417908.1 | diterpene synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|---|---|---|---|---|---|
Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0.008 |