MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 105727 bp
Accession: NZ_CP011483 Location: 1158332..1264058 Organism: Helicobacter pylori strain DU15 Replicon: chromosome
Accession: NZ_CP011483 Location: 1158332..1264058 Organism: Helicobacter pylori strain DU15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EE66_RS05690 () | 1153775..1154704 | - | 930 | WP_064431289.1 | ACP S-malonyltransferase | - |
| EE66_RS05700 () | 1155141..1156154 | + | 1014 | WP_064431290.1 | hypothetical protein | - |
| EE66_RS05705 () | 1156158..1156979 | + | 822 | WP_064431291.1 | site-specific DNA-methyltransferase | - |
| EE66_RS08145 () | 1156999..1157895 | - | 897 | WP_082231437.1 | alpha-1,2-fucosyltransferase | - |
| EE66_RS05720 () | 1157994..1158524 | - | 531 | WP_001125771.1 | hypothetical protein | - |
| EE66_RS05725 () | 1158597..1159541 | + | 945 | WP_064431293.1 | D-2-hydroxyacid dehydrogenase | - |
| EE66_RS05730 () | 1159904..1160614 | - | 711 | WP_064431294.1 | hypothetical protein | - |
| EE66_RS05735 () | 1160720..1162180 | - | 1461 | WP_064431295.1 | threonine synthase | - |
| EE66_RS05740 () | 1162391..1164418 | + | 2028 | WP_064431296.1 | Methyl-accepting chemotaxis protein PctC | VF |
| EE66_RS05745 () | 1164418..1165524 | + | 1107 | WP_064431297.1 | epoxyqueuosine reductase QueH | - |
| EE66_RS05750 () | 1165657..1166418 | + | 762 | WP_064431298.1 | outer membrane beta-barrel protein | - |
| EE66_RS05755 () | 1166401..1167183 | - | 783 | WP_064431299.1 | putative glycosyltransferase | VF |
| EE66_RS05760 () | 1167213..1168910 | - | 1698 | WP_064431300.1 | Methyl-accepting chemotaxis protein 4 | VF |
| EE66_RS05765 () | 1169118..1170863 | - | 1746 | WP_064431301.1 | 5'-nucleotidase C-terminal domain-containing protein | - |
| EE66_RS05770 () | 1171014..1171481 | - | 468 | WP_021300980.1 | S-ribosylhomocysteine lyase | VF |
| EE66_RS05775 () | 1171516..1172658 | - | 1143 | WP_064431302.1 | cystathionine gamma-synthase | - |
| EE66_RS05780 () | 1172679..1173596 | - | 918 | WP_064431303.1 | O-acetylserine-dependent cystathionine beta-synthase | - |
| EE66_RS05785 () | 1173853..1175715 | - | 1863 | WP_064431304.1 | molecular chaperone DnaK | - |
| EE66_RS05790 () | 1175746..1176321 | - | 576 | WP_064431305.1 | nucleotide exchange factor GrpE | - |
| EE66_RS05795 () | 1176321..1177151 | - | 831 | WP_064431306.1 | HrcA family transcriptional regulator | - |
| EE66_RS05800 () | 1177371..1178009 | + | 639 | WP_064431307.1 | class II aldolase and adducin N-terminal domain-containing protein | - |
| EE66_RS05805 () | 1178030..1178326 | + | 297 | WP_064431308.1 | hypothetical protein | - |
| EE66_RS05810 () | 1178353..1180236 | - | 1884 | WP_064431309.1 | hypothetical protein | VF |
| EE66_RS05815 () | 1180320..1181864 | - | 1545 | WP_064431310.1 | Flagellin B | VF |
| EE66_RS05820 () | 1182030..1184240 | + | 2211 | WP_064431311.1 | type I DNA topoisomerase | - |
| EE66_RS05825 () | 1184233..1185159 | + | 927 | WP_064431312.1 | radical SAM protein | - |
| EE66_RS05830 () | 1185252..1186253 | - | 1002 | WP_064431313.1 | DUF874 family protein | - |
| EE66_RS05835 () | 1186525..1187760 | - | 1236 | WP_064431314.1 | DUF874 family protein | - |
| EE66_RS05840 () | 1187859..1190297 | - | 2439 | WP_064431315.1 | pyruvate, water dikinase | - |
| EE66_RS08475 () | 1190389..1190547 | - | 159 | WP_172795844.1 | hypothetical protein | - |
| EE66_RS05850 () | 1190655..1192493 | + | 1839 | WP_064431316.1 | threonine--tRNA ligase | - |
| EE66_RS05855 () | 1192490..1193101 | + | 612 | WP_000089194.1 | translation initiation factor IF-3 | - |
| EE66_RS05860 () | 1193082..1193276 | + | 195 | WP_001125542.1 | 50S ribosomal protein L35 | - |
| EE66_RS05865 () | 1193369..1193719 | + | 351 | WP_001264172.1 | 50S ribosomal protein L20 | - |
| EE66_RS05870 () | 1193919..1194779 | + | 861 | WP_064431317.1 | hypothetical protein | VF |
| EE66_RS05880 () | 1195135..1195322 | + | 188 | Protein_1128 | DUF1104 domain-containing protein | - |
| EE66_RS08150 () | 1195285..1196259 | - | 975 | WP_082231440.1 | DNA topoisomerase I | - |
| EE66_RS08155 () | 1196272..1196912 | - | 641 | Protein_1130 | type IA DNA topoisomerase | - |
| EE66_RS05890 () | 1196915..1199283 | - | 2369 | Protein_1131 | Type IV secretion system protein PtlC | VF |
| EE66_RS05900 () | 1199330..1199596 | - | 267 | WP_064431320.1 | hypothetical protein | - |
| EE66_RS05905 () | 1199597..1199899 | - | 303 | WP_082231441.1 | virB2 type IV secretion protein | - |
| EE66_RS05910 () | 1199896..1201419 | - | 1524 | WP_064431321.1 | hypothetical protein | - |
| EE66_RS05915 () | 1201436..1201719 | - | 284 | Protein_1135 | hypothetical protein | - |
| EE66_RS05925 () | 1202012..1202563 | + | 552 | WP_154806617.1 | type IA DNA topoisomerase | - |
| EE66_RS05930 () | 1202618..1203088 | + | 471 | WP_064431323.1 | hypothetical protein | - |
| EE66_RS05935 () | 1203058..1203859 | + | 802 | Protein_1138 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| EE66_RS05940 () | 1203981..1204544 | - | 564 | WP_064431609.1 | hypothetical protein | - |
| EE66_RS05945 () | 1204531..1204908 | - | 378 | WP_000365702.1 | hypothetical protein | - |
| EE66_RS05950 () | 1204944..1205621 | - | 678 | WP_064431324.1 | ParA family protein | - |
| EE66_RS08480 () | 1206221..1206385 | + | 165 | WP_172795859.1 | hypothetical protein | - |
| EE66_RS05955 () | 1206386..1207438 | + | 1053 | WP_064431325.1 | DUF1738 domain-containing protein | - |
| EE66_RS05960 () | 1207438..1209414 | + | 1977 | WP_064431326.1 | hypothetical protein | - |
| EE66_RS05965 () | 1209809..1210885 | + | 1077 | WP_064431327.1 | Tyrosine recombinase XerH ; Integrase | Integrase |
| EE66_RS05970 () | 1210948..1212150 | - | 1203 | WP_064431328.1 | hypothetical protein | - |
| EE66_RS05975 () | 1212150..1213541 | - | 1392 | WP_064431610.1 | hypothetical protein | - |
| EE66_RS05980 () | 1213538..1215715 | - | 2178 | WP_064431611.1 | hypothetical protein | - |
| EE66_RS05985 () | 1215736..1217130 | - | 1395 | WP_064431329.1 | hypothetical protein | - |
| EE66_RS05990 () | 1217131..1218168 | - | 1038 | WP_064431330.1 | hypothetical protein | - |
| EE66_RS05995 () | 1218323..1226749 | + | 8427 | WP_064431331.1 | DEAD/DEAH box helicase family protein | - |
| EE66_RS06000 () | 1226995..1227651 | + | 657 | WP_064431332.1 | ParA family protein | - |
| EE66_RS06005 () | 1227736..1228017 | + | 282 | WP_000394649.1 | hypothetical protein ; Integrase | Integrase |
| EE66_RS06010 () | 1228061..1229245 | + | 1185 | WP_064431333.1 | hypothetical protein | - |
| EE66_RS06015 () | 1229270..1231180 | - | 1911 | WP_064431334.1 | relaxase/mobilization nuclease domain-containing protein | - |
| EE66_RS06020 () | 1231484..1231798 | + | 315 | WP_000065290.1 | hypothetical protein | Antitoxin Detail |
| EE66_RS06025 () | 1231791..1232072 | + | 282 | WP_064431335.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| EE66_RS06030 () | 1232356..1234083 | - | 1728 | WP_064431336.1 | Protein VirD4 | VF |
| EE66_RS06035 () | 1234084..1234641 | - | 558 | WP_064431337.1 | hypothetical protein | - |
| EE66_RS06040 () | 1234642..1234932 | - | 291 | WP_000159825.1 | hypothetical protein | - |
| EE66_RS06045 () | 1234929..1235384 | - | 456 | WP_000795419.1 | hypothetical protein | - |
| EE66_RS06050 () | 1235381..1236323 | - | 943 | Protein_1162 | Type IV secretion system protein VirB11 | VF |
| EE66_RS06055 () | 1236313..1236624 | - | 312 | WP_064431338.1 | hypothetical protein | - |
| EE66_RS06060 () | 1236621..1236884 | - | 264 | WP_064431339.1 | hypothetical protein | - |
| EE66_RS06065 () | 1236877..1237170 | - | 294 | WP_064431340.1 | hypothetical protein | - |
| EE66_RS06070 () | 1237258..1238475 | - | 1218 | WP_064431341.1 | Type IV secretion system protein virB10 | VF |
| EE66_RS06075 () | 1238472..1240013 | - | 1542 | WP_064431342.1 | hypothetical protein | VF |
| EE66_RS06080 () | 1240013..1240999 | - | 987 | WP_064431343.1 | hypothetical protein | VF |
| EE66_RS06085 () | 1241129..1243060 | - | 1932 | WP_064431612.1 | type IA DNA topoisomerase | - |
| EE66_RS06090 () | 1243053..1245551 | - | 2499 | WP_064431344.1 | Type IV secretion system protein PtlC | VF |
| EE66_RS06095 () | 1245564..1245824 | - | 261 | WP_000602758.1 | hypothetical protein | - |
| EE66_RS06100 () | 1245825..1246127 | - | 303 | WP_000650126.1 | TrbC/VirB2 family protein | - |
| EE66_RS06105 () | 1246117..1248033 | - | 1917 | WP_064431345.1 | hypothetical protein | - |
| EE66_RS06110 () | 1248044..1248808 | - | 765 | WP_064431346.1 | hypothetical protein | - |
| EE66_RS08160 () | 1248856..1249651 | + | 796 | Protein_1175 | hypothetical protein | - |
| EE66_RS06120 () | 1249667..1250212 | + | 546 | WP_082231442.1 | hypothetical protein | - |
| EE66_RS06125 () | 1250209..1251459 | + | 1251 | WP_064431348.1 | P-type conjugative transfer protein TrbL | - |
| EE66_RS06130 () | 1251471..1252712 | + | 1242 | WP_064431349.1 | hypothetical protein | - |
| EE66_RS06135 () | 1252716..1253364 | - | 649 | Protein_1179 | hypothetical protein | - |
| EE66_RS08165 () | 1253614..1253817 | + | 204 | WP_082231443.1 | CAAX protease | - |
| EE66_RS08170 () | 1253870..1254265 | + | 396 | WP_082231444.1 | hypothetical protein | - |
| EE66_RS06145 () | 1254397..1254648 | + | 252 | WP_000006537.1 | hypothetical protein | - |
| EE66_RS06150 () | 1254620..1255423 | + | 804 | WP_064431350.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| EE66_RS06155 () | 1255737..1256804 | - | 1068 | WP_064431351.1 | Tyrosine recombinase XerH ; Integrase | Integrase |
| EE66_RS06160 () | 1256961..1259003 | + | 2043 | WP_172795860.1 | RNA polymerase sigma factor RpoD | - |
| EE66_RS06165 () | 1259024..1260400 | + | 1377 | WP_064431353.1 | SH3 domain-containing protein | - |
| EE66_RS06170 () | 1260454..1261806 | + | 1353 | WP_000061413.1 | FAD-dependent oxidoreductase | - |
| EE66_RS06175 () | 1261812..1262000 | + | 189 | WP_064431354.1 | DUF5408 family protein | - |
| EE66_RS06180 () | 1262291..1262716 | + | 426 | WP_000167675.1 | 50S ribosomal protein L13 | - |
| EE66_RS06185 () | 1262713..1263102 | + | 390 | WP_001227270.1 | 30S ribosomal protein S9 | - |
| EE66_RS06190 () | 1263253..1265274 | + | 2022 | WP_064431355.1 | methyl-accepting chemotaxis protein TlpC | - |
| EE66_RS06200 () | 1265501..1267246 | - | 1746 | WP_064431357.1 | hypothetical protein | - |
| EE66_RS08360 () | 1267482..1268920 | - | 1439 | Protein_1193 | outer membrane protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|