MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 154071 bp
Accession: NZ_CP011480 Location: 1..154071 Organism: Hoeflea sp. IMCC20628 Replicon: plasmid unnamed
Accession: NZ_CP011480 Location: 1..154071 Organism: Hoeflea sp. IMCC20628 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMCC20628_RS22790 () | 1255..2487 | - | 1233 | WP_047032894.1 | tyrosine-type recombinase/integrase | - |
| IMCC20628_RS22795 () | 2612..3568 | + | 957 | WP_047032895.1 | DUF1403 family protein | - |
| IMCC20628_RS22800 () | 3565..4254 | + | 690 | WP_156174705.1 | SMC-Scp complex subunit ScpB | - |
| IMCC20628_RS22805 () | 4316..4660 | - | 345 | WP_047032897.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| IMCC20628_RS22810 () | 4672..4923 | - | 252 | WP_047032898.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IMCC20628_RS22815 () | 5313..6227 | - | 915 | WP_047032994.1 | IS5 family transposase ISHph1 | Transposase |
| IMCC20628_RS22820 () | 6502..6789 | + | 288 | WP_047032995.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| IMCC20628_RS22825 () | 6786..7844 | + | 1059 | WP_047032899.1 | permease | - |
| IMCC20628_RS22830 () | 7883..8119 | + | 237 | WP_047032900.1 | thioredoxin family protein | - |
| IMCC20628_RS22835 () | 8236..9036 | + | 801 | WP_197078505.1 | MBL fold metallo-hydrolase | - |
| IMCC20628_RS22840 () | 9036..9440 | + | 405 | WP_047032996.1 | OsmC family protein | - |
| IMCC20628_RS22845 () | 9498..11957 | + | 2460 | WP_047032902.1 | heavy metal translocating P-type ATPase | - |
| IMCC20628_RS22850 () | 12213..12407 | - | 195 | Protein_13 | IS5 family transposase ISMdi21 | Transposase |
| IMCC20628_RS24855 () | 12542..12727 | - | 186 | Protein_14 | transposase | - |
| IMCC20628_RS24445 () | 12766..13059 | + | 294 | WP_052766640.1 | hypothetical protein | - |
| IMCC20628_RS24450 () | 13078..13671 | + | 594 | WP_052766641.1 | hypothetical protein | - |
| IMCC20628_RS22860 () | 13737..13970 | - | 234 | WP_047032903.1 | hexameric tyrosine-coordinated heme protein | - |
| IMCC20628_RS22865 () | 14250..15371 | - | 1122 | WP_047032904.1 | ABC transporter permease | - |
| IMCC20628_RS22870 () | 15373..18147 | - | 2775 | WP_047032905.1 | ribosome-associated ATPase/putative transporter RbbA | - |
| IMCC20628_RS22875 () | 18144..19178 | - | 1035 | WP_047032906.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| IMCC20628_RS22880 () | 19219..20001 | - | 783 | WP_047032907.1 | TIGR00730 family Rossman fold protein | - |
| IMCC20628_RS22885 () | 19998..21428 | - | 1431 | WP_047032908.1 | MBL fold metallo-hydrolase | - |
| IMCC20628_RS22890 () | 21425..22051 | - | 627 | WP_047032909.1 | TetR/AcrR family transcriptional regulator | - |
| IMCC20628_RS22895 () | 22236..22592 | + | 357 | WP_047032910.1 | hypothetical protein | - |
| IMCC20628_RS22900 () | 22694..23092 | + | 399 | WP_047032911.1 | hypothetical protein | - |
| IMCC20628_RS22905 () | 23175..24476 | + | 1302 | WP_052766642.1 | HlyD family secretion protein | - |
| IMCC20628_RS22910 () | 24473..27577 | + | 3105 | WP_047032912.1 | efflux RND transporter permease subunit | - |
| IMCC20628_RS22915 () | 27726..28892 | + | 1167 | WP_197078506.1 | patatin-like phospholipase family protein | - |
| IMCC20628_RS24860 () | 29088..29422 | + | 335 | Protein_29 | IS630 family transposase | - |
| IMCC20628_RS22920 () | 29426..30772 | - | 1347 | WP_047032914.1 | two-component sensor histidine kinase | - |
| IMCC20628_RS22925 () | 30769..31428 | - | 660 | WP_047032915.1 | Transcriptional regulatory protein QseB | VF |
| IMCC20628_RS22930 () | 31570..31845 | + | 276 | WP_047032916.1 | PepSY domain-containing protein | - |
| IMCC20628_RS22935 () | 31998..32336 | + | 339 | WP_047032917.1 | hypothetical protein | - |
| IMCC20628_RS22940 () | 32528..32998 | + | 471 | WP_047032918.1 | DUF2271 domain-containing protein | - |
| IMCC20628_RS22945 () | 33010..35220 | + | 2211 | WP_047032919.1 | PepSY domain-containing protein | - |
| IMCC20628_RS22950 () | 35201..36166 | + | 966 | WP_047032920.1 | FAD:protein FMN transferase | - |
| IMCC20628_RS24455 () | 36796..37788 | + | 993 | WP_052766643.1 | universal stress protein | - |
| IMCC20628_RS22960 () | 37785..46235 | + | 8451 | WP_047032921.1 | Cyclic beta-(1,2)-glucan synthase NdvB | VF |
| IMCC20628_RS22965 () | 46299..46997 | + | 699 | WP_047032922.1 | IS6 family transposase ISEas1 | Transposase |
| IMCC20628_RS22970 () | 47165..47743 | + | 579 | WP_047032923.1 | TRAP transporter small permease subunit | - |
| IMCC20628_RS22975 () | 47743..49134 | + | 1392 | WP_047031487.1 | TRAP transporter large permease subunit | - |
| IMCC20628_RS22980 () | 49509..50603 | - | 1095 | WP_047032924.1 | TRAP transporter substrate-binding protein | - |
| IMCC20628_RS22985 () | 50783..52195 | - | 1413 | WP_082128395.1 | UvrD-helicase domain-containing protein | - |
| IMCC20628_RS22990 () | 52292..52894 | - | 603 | WP_047032925.1 | rhodanese-like domain-containing protein | - |
| IMCC20628_RS25245 () | 53071..53253 | - | 183 | Protein_45 | transposase | - |
| IMCC20628_RS22995 () | 53386..54084 | + | 699 | WP_082128377.1 | IS6 family transposase ISRssp3 | Transposase |
| IMCC20628_RS23000 () | 54207..54455 | + | 249 | Protein_47 | IS110 family transposase ISRle1 | Transposase |
| IMCC20628_RS24870 () | 54572..54838 | - | 267 | Protein_48 | Tyrosine recombinase XerD | VF |
| IMCC20628_RS23010 () | 55004..55813 | + | 810 | Protein_49 | IS110 family transposase | - |
| IMCC20628_RS23020 () | 56469..57401 | + | 933 | WP_082128379.1 | diaminopimelate epimerase | - |
| IMCC20628_RS23025 () | 57410..58150 | + | 741 | WP_082128396.1 | Glutamine transport ATP-binding protein GlnQ | VF |
| IMCC20628_RS23030 () | 58180..58980 | + | 801 | WP_047032929.1 | ABC transporter substrate-binding protein | - |
| IMCC20628_RS23035 () | 59081..59773 | + | 693 | WP_047032930.1 | amino acid ABC transporter permease | - |
| IMCC20628_RS23040 () | 59784..60473 | + | 690 | WP_047032931.1 | amino acid ABC transporter permease | - |
| IMCC20628_RS23045 () | 60581..61852 | + | 1272 | WP_047032932.1 | FAD-binding oxidoreductase | - |
| IMCC20628_RS23050 () | 61859..63202 | + | 1344 | WP_047032933.1 | FAD-binding oxidoreductase | - |
| IMCC20628_RS23055 () | 63607..64323 | - | 717 | WP_047032934.1 | IS6 family transposase ISBj7 | Transposase |
| IMCC20628_RS23060 () | 64349..64813 | - | 465 | Protein_58 | IS6 family transposase ISPko6 | Transposase |
| IMCC20628_RS24875 () | 64905..65281 | + | 377 | Protein_59 | IS21 family transposase ISMex8 | Transposase |
| IMCC20628_RS23065 () | 65203..65793 | + | 591 | WP_047032935.1 | TetR/AcrR family transcriptional regulator | - |
| IMCC20628_RS23070 () | 65790..66572 | + | 783 | WP_052766645.1 | enoyl-CoA hydratase/isomerase family protein | - |
| IMCC20628_RS23075 () | 66565..68049 | + | 1485 | WP_047032936.1 | AMP-binding protein | - |
| IMCC20628_RS23080 () | 68046..68402 | + | 357 | WP_047032937.1 | hydratase | - |
| IMCC20628_RS23085 () | 68399..68758 | + | 360 | WP_082128380.1 | phosphate acetyltransferase | - |
| IMCC20628_RS23090 () | 68782..69552 | - | 771 | WP_052766646.1 | alpha/beta fold hydrolase | - |
| IMCC20628_RS23095 () | 69558..70610 | - | 1053 | WP_047032939.1 | branched-chain amino acid ABC transporter permease | - |
| IMCC20628_RS23100 () | 70612..71643 | - | 1032 | WP_047032940.1 | branched-chain amino acid ABC transporter permease | - |
| IMCC20628_RS23105 () | 71646..72368 | - | 723 | WP_047032941.1 | ABC transporter ATP-binding protein | - |
| IMCC20628_RS23110 () | 72361..73125 | - | 765 | WP_047032942.1 | ABC transporter ATP-binding protein | - |
| IMCC20628_RS23115 () | 73192..74361 | - | 1170 | WP_047033007.1 | substrate-binding domain-containing protein | - |
| IMCC20628_RS23125 () | 74980..75729 | + | 750 | WP_047032944.1 | Sulfate/thiosulfate import ATP-binding protein CysA | VF |
| IMCC20628_RS23130 () | 75722..76438 | + | 717 | WP_047032945.1 | ABC transporter ATP-binding protein | - |
| IMCC20628_RS23135 () | 76491..77693 | + | 1203 | WP_047032946.1 | ABC transporter substrate-binding protein | - |
| IMCC20628_RS23140 () | 77769..78656 | + | 888 | WP_047032947.1 | branched-chain amino acid ABC transporter permease | - |
| IMCC20628_RS23145 () | 78656..79633 | + | 978 | WP_156174707.1 | branched-chain amino acid ABC transporter permease | - |
| IMCC20628_RS24880 () | 79782..79948 | + | 167 | Protein_76 | transposase | - |
| IMCC20628_RS24885 () | 80010..80297 | - | 288 | Protein_77 | IS6 family transposase | - |
| IMCC20628_RS23150 () | 80353..81009 | + | 657 | WP_047032948.1 | IS6 family transposase ISPpa9 | Transposase |
| IMCC20628_RS23155 () | 81006..81746 | + | 741 | WP_047032949.1 | IS6 family transposase ISBj7 | Transposase |
| IMCC20628_RS23160 () | 82059..82475 | + | 417 | WP_047033009.1 | IS200-IS605 family transposase ISPlu2 | Transposase |
| IMCC20628_RS23165 () | 82698..83636 | + | 939 | WP_156174708.1 | sulfotransferase | - |
| IMCC20628_RS23170 () | 83652..84506 | + | 855 | WP_047032951.1 | hypothetical protein | - |
| IMCC20628_RS23175 () | 84647..85261 | - | 615 | Protein_83 | IS630 family transposase ISSpo6 | Transposase |
| IMCC20628_RS23180 () | 85345..86115 | - | 771 | Protein_84 | IS21 family transposase ISPve1 | Transposase |
| IMCC20628_RS23185 () | 86112..87317 | - | 1206 | WP_082128381.1 | IS21 family transposase ISSsp5 | Transposase |
| IMCC20628_RS23190 () | 87645..89003 | + | 1359 | Protein_86 | IS5 family transposase ISNoc2 | Transposase |
| IMCC20628_RS23195 () | 89022..89396 | - | 375 | WP_047032953.1 | IS630 family transposase ISGdi6 | Transposase |
| IMCC20628_RS23200 () | 89800..90975 | - | 1176 | WP_047032954.1 | IS91 family transposase ISAzo26 | Transposase |
| IMCC20628_RS23205 () | 90988..91848 | - | 861 | WP_047032955.1 | Tyrosine recombinase XerD | VF |
| IMCC20628_RS23210 () | 91981..93879 | - | 1899 | WP_047032956.1 | sulfate adenylyltransferase subunit CysN | - |
| IMCC20628_RS23215 () | 93879..94802 | - | 924 | WP_047032957.1 | sulfate adenylyltransferase subunit CysD | - |
| IMCC20628_RS25250 () | 94909..95019 | - | 111 | Protein_92 | IS110 family transposase ISMdi12 | Transposase |
| IMCC20628_RS23220 () | 95161..96279 | - | 1119 | WP_047032958.1 | IS5 family transposase ISRsp5 | Transposase |
| IMCC20628_RS23225 () | 96551..97471 | + | 921 | WP_082128382.1 | IS110 family transposase ISMno14 | Transposase |
| IMCC20628_RS23230 () | 97588..98613 | + | 1026 | WP_047033012.1 | IS110 family transposase ISMno14 | Transposase |
| IMCC20628_RS23235 () | 99258..101276 | - | 2019 | WP_082128383.1 | glycosyltransferase | - |
| IMCC20628_RS23240 () | 101392..102672 | - | 1281 | WP_047032959.1 | NDP-hexose 2,3-dehydratase family protein | - |
| IMCC20628_RS23245 () | 102757..103983 | - | 1227 | WP_047032960.1 | DUF563 domain-containing protein | - |
| IMCC20628_RS23250 () | 104335..106341 | + | 2007 | WP_047032961.1 | acyltransferase | - |
| IMCC20628_RS23255 () | 106347..107492 | - | 1146 | WP_047032962.1 | ISAs1 family transposase ISOan1 | Transposase |
| IMCC20628_RS23260 () | 107660..109012 | + | 1353 | WP_047032963.1 | UDP-glucose 6-dehydrogenase | VF |
| IMCC20628_RS23265 () | 109311..110246 | + | 936 | WP_047033014.1 | hypothetical protein | VF |
| IMCC20628_RS23270 () | 110286..111146 | + | 861 | WP_047032964.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| IMCC20628_RS23275 () | 111157..111729 | + | 573 | WP_047033015.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | VF |
| IMCC20628_RS23280 () | 111731..112783 | + | 1053 | WP_047032965.1 | dTDP-glucose 4,6-dehydratase | VF |
| IMCC20628_RS23285 () | 112800..113699 | + | 900 | WP_047032966.1 | dTDP-4-dehydrorhamnose reductase | - |
| IMCC20628_RS24890 () | 113757..113984 | - | 228 | Protein_107 | IS6 family transposase ISRH1 | Transposase |
| IMCC20628_RS23290 () | 114018..114704 | - | 687 | Protein_108 | IS3 family transposase ISPmar2 | Transposase |
| IMCC20628_RS25255 () | 115743..116153 | - | 411 | Protein_110 | transposase | - |
| IMCC20628_RS23315 () | 116188..116976 | - | 789 | WP_082128386.1 | IS630 family transposase ISGdi4 | Transposase |
| IMCC20628_RS23320 () | 117450..118229 | + | 780 | WP_197078504.1 | ABC transporter permease | - |
| IMCC20628_RS23325 () | 118226..118987 | + | 762 | WP_052766649.1 | Polysialic acid transport ATP-binding protein KpsT | VF |
| IMCC20628_RS23330 () | 119215..119523 | - | 309 | Protein_114 | IS3 family transposase ISKpn11 | Transposase |
| IMCC20628_RS25515 () | 119623..120072 | + | 450 | WP_197078507.1 | IS3 family transposase ISMex37 | Transposase |
| IMCC20628_RS23345 () | 120083..121330 | - | 1248 | WP_047029227.1 | IS256 family transposase ISOan5 | Transposase |
| IMCC20628_RS23350 () | 121844..122398 | + | 555 | WP_156174710.1 | hypothetical protein | - |
| IMCC20628_RS23355 () | 122646..123074 | + | 429 | Protein_118 | acetoacetate--CoA ligase | - |
| IMCC20628_RS23360 () | 123292..124005 | - | 714 | WP_047032971.1 | IS6 family transposase ISRssp3 | Transposase |
| IMCC20628_RS23365 () | 124037..124327 | - | 291 | Protein_120 | IS5 family transposase ISOcan1 | Transposase |
| IMCC20628_RS23370 () | 124485..124739 | + | 255 | WP_047032973.1 | hypothetical protein | - |
| IMCC20628_RS23375 () | 125592..125816 | + | 225 | WP_156174711.1 | hypothetical protein | - |
| IMCC20628_RS23380 () | 125912..127252 | + | 1341 | WP_052766650.1 | sugar ABC transporter substrate-binding protein | - |
| IMCC20628_RS23385 () | 127441..128667 | + | 1227 | WP_047032976.1 | mandelate racemase/muconate lactonizing enzyme family protein | - |
| IMCC20628_RS23390 () | 128701..130299 | + | 1599 | WP_047032977.1 | GMC family oxidoreductase | - |
| IMCC20628_RS23395 () | 130310..130789 | + | 480 | WP_047033020.1 | hypothetical protein | - |
| IMCC20628_RS23400 () | 130786..131712 | + | 927 | WP_047032978.1 | sugar ABC transporter permease | - |
| IMCC20628_RS23405 () | 131709..132569 | + | 861 | WP_047032979.1 | carbohydrate ABC transporter permease | - |
| IMCC20628_RS23410 () | 132610..133287 | + | 678 | WP_047032980.1 | GntR family transcriptional regulator | - |
| IMCC20628_RS23415 () | 133345..134418 | + | 1074 | WP_047032981.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| IMCC20628_RS23420 () | 134468..135901 | + | 1434 | WP_047032982.1 | aldehyde dehydrogenase family protein | - |
| IMCC20628_RS23425 () | 136016..136342 | - | 327 | Protein_132 | IS6 family transposase ISBj7 | Transposase |
| IMCC20628_RS25260 () | 136256..136459 | + | 204 | WP_156174712.1 | CcdB family protein | - |
| IMCC20628_RS23430 () | 136673..137194 | - | 522 | WP_047032983.1 | hypothetical protein | - |
| IMCC20628_RS23435 () | 137321..137989 | - | 669 | WP_052766651.1 | Secretory immunoglobulin A-binding protein EsiB | VF |
| IMCC20628_RS23440 () | 138247..139524 | - | 1278 | WP_047029005.1 | IS66 family transposase ISMno2 | Transposase |
| IMCC20628_RS23445 () | 139723..139971 | - | 249 | WP_156174716.1 | WGR domain-containing protein | - |
| IMCC20628_RS23455 () | 140506..141857 | + | 1352 | WP_156174385.1 | IS3 family transposase ISSsp2 | Transposase |
| IMCC20628_RS25520 () | 141934..142113 | + | 180 | Protein_139 | IS630 family transposase | - |
| IMCC20628_RS24915 () | 142121..142731 | + | 611 | Protein_140 | IS1595 family transposase ISRhtr1 | Transposase |
| IMCC20628_RS23470 () | 142740..143105 | - | 366 | WP_047032985.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IMCC20628_RS23475 () | 143105..143383 | - | 279 | WP_047032986.1 | ribbon-helix-helix protein, CopG family | - |
| IMCC20628_RS23480 () | 143675..144310 | + | 636 | WP_047032987.1 | hypothetical protein | - |
| IMCC20628_RS23485 () | 144671..144880 | - | 210 | WP_047032988.1 | hypothetical protein | - |
| IMCC20628_RS23490 () | 145183..145701 | - | 519 | WP_156174713.1 | hypothetical protein | - |
| IMCC20628_RS23495 () | 146063..149488 | + | 3426 | WP_047032990.1 | DEAD/DEAH box helicase | - |
| IMCC20628_RS24920 () | 149608..150000 | + | 393 | Protein_147 | IS6 family transposase ISRsp9 | Transposase |
| IMCC20628_RS24925 () | 150064..150288 | + | 225 | WP_082128394.1 | cupin domain-containing protein | - |
| IMCC20628_RS23505 () | 150360..151715 | - | 1356 | WP_047032991.1 | hypothetical protein | - |
| IMCC20628_RS23510 () | 151938..153044 | - | 1107 | WP_047032992.1 | plasmid partitioning protein RepB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|