MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 88949 bp
Accession: NZ_CP011430 Location: 1..88949 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain YU39 isolate YUHS 05-78 Replicon: plasmid pYU39_89
Accession: NZ_CP011430 Location: 1..88949 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain YU39 isolate YUHS 05-78 Replicon: plasmid pYU39_89
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SE14_RS24660 () | 168..1196 | + | 1029 | WP_001292231.1 | tyrosine-type recombinase/integrase | - |
| SE14_RS24665 () | 1306..1614 | + | 309 | WP_000349257.1 | hypothetical protein | - |
| SE14_RS24670 () | 1611..2087 | + | 477 | WP_001557738.1 | hypothetical protein | - |
| SE14_RS24675 () | 2084..2578 | + | 495 | WP_001557737.1 | dUTP diphosphatase | - |
| SE14_RS24680 () | 2593..3033 | + | 441 | WP_001557736.1 | DUF2829 domain-containing protein | - |
| SE14_RS24685 () | 3040..3816 | + | 777 | WP_022630895.1 | hypothetical protein | - |
| SE14_RS24690 () | 3849..4046 | - | 198 | WP_000113017.1 | hypothetical protein | - |
| SE14_RS24695 () | 4051..4431 | - | 381 | WP_001216038.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| SE14_RS24700 () | 4431..4652 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| SE14_RS24705 () | 4761..5183 | - | 423 | WP_000098854.1 | hypothetical protein | - |
| SE14_RS24710 () | 5318..5707 | - | 390 | WP_022630896.1 | DNA repair protein | - |
| SE14_RS27300 () | 5719..5865 | - | 147 | WP_001443773.1 | hypothetical protein | - |
| SE14_RS25590 () | 6039..6248 | + | 210 | WP_001344848.1 | hypothetical protein | - |
| SE14_RS24720 () | 6233..6507 | - | 275 | Protein_13 | antitoxin PHD | - |
| SE14_RS27940 () | 6853..7569 | - | 717 | Protein_14 | DUF551 domain-containing protein | - |
| SE14_RS24730 () | 7580..8035 | - | 456 | WP_001142594.1 | DUF4014 family protein | - |
| SE14_RS24735 () | 8037..8252 | - | 216 | WP_001557731.1 | hypothetical protein | - |
| SE14_RS24740 () | 8254..8445 | - | 192 | WP_001557730.1 | hypothetical protein | - |
| SE14_RS24745 () | 8432..9079 | - | 648 | WP_000034256.1 | ead/Ea22-like family protein | - |
| SE14_RS24750 () | 9066..9365 | - | 300 | WP_046891370.1 | hypothetical protein | - |
| SE14_RS24755 () | 9379..10374 | - | 996 | WP_046891371.1 | DUF968 domain-containing protein | - |
| SE14_RS24760 () | 10473..11165 | - | 693 | WP_000616788.1 | metallophosphoesterase | - |
| SE14_RS24765 () | 11162..11473 | - | 312 | WP_000022451.1 | hypothetical protein | - |
| SE14_RS24770 () | 11470..11694 | - | 225 | WP_000139729.1 | hypothetical protein | - |
| SE14_RS24775 () | 11657..11965 | - | 309 | WP_001018053.1 | DUF4752 family protein | - |
| SE14_RS24780 () | 11962..12210 | - | 249 | WP_000072161.1 | hypothetical protein | - |
| SE14_RS24785 () | 12207..12695 | - | 489 | WP_000834211.1 | hypothetical protein | - |
| SE14_RS25750 () | 12999..13610 | - | 612 | WP_000240858.1 | DUF4406 domain-containing protein | - |
| SE14_RS24805 () | 13883..14461 | + | 579 | WP_022630898.1 | recombinase | - |
| SE14_RS28475 () | 14793..14960 | + | 168 | WP_022630899.1 | hypothetical protein | - |
| SE14_RS27310 () | 15135..15254 | + | 120 | WP_071526433.1 | ash family protein | - |
| SE14_RS24815 () | 15273..15488 | + | 216 | WP_022630900.1 | host cell division inhibitor Icd-like protein | - |
| SE14_RS24820 () | 15488..16414 | + | 927 | WP_022630901.1 | Rha family transcriptional regulator | - |
| SE14_RS24825 () | 16474..16758 | + | 285 | WP_022630902.1 | hypothetical protein | - |
| SE14_RS24830 () | 16904..17254 | + | 351 | WP_000201621.1 | hypothetical protein | - |
| SE14_RS24835 () | 17294..18205 | - | 912 | WP_024144056.1 | hypothetical protein | - |
| SE14_RS24840 () | 18473..19126 | + | 654 | WP_001557715.1 | hypothetical protein | - |
| SE14_RS24850 () | 19455..19784 | + | 330 | WP_000542383.1 | hypothetical protein | - |
| SE14_RS24855 () | 19777..20973 | + | 1197 | WP_022630904.1 | hypothetical protein | - |
| SE14_RS28480 () | 21007..21744 | - | 738 | WP_022630905.1 | hypothetical protein | - |
| SE14_RS24865 () | 21806..22165 | - | 360 | WP_022630906.1 | transcriptional regulator | - |
| SE14_RS24870 () | 22222..22560 | - | 339 | WP_000806445.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| SE14_RS24875 () | 22631..22933 | - | 303 | WP_000162415.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SE14_RS24880 () | 23096..23887 | + | 792 | WP_001557712.1 | hypothetical protein | - |
| SE14_RS24885 () | 23884..24651 | + | 768 | WP_000203293.1 | hypothetical protein | - |
| SE14_RS24890 () | 24655..25635 | + | 981 | WP_000046500.1 | hypothetical protein | - |
| SE14_RS24895 () | 25632..26285 | + | 654 | WP_000828868.1 | hypothetical protein | - |
| SE14_RS24900 () | 26345..27250 | + | 906 | WP_001258018.1 | recombination-associated protein RdgC | - |
| SE14_RS24905 () | 27234..27914 | + | 681 | WP_000812238.1 | hypothetical protein | - |
| SE14_RS24910 () | 27907..28812 | + | 906 | WP_000045489.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| SE14_RS24915 () | 28861..30522 | - | 1662 | WP_001287145.1 | glutamine--tRNA ligase | - |
| SE14_RS24920 () | 30791..31078 | - | 288 | WP_000595051.1 | hypothetical protein | - |
| SE14_RS24925 () | 31071..31712 | - | 642 | WP_000585023.1 | AAA family ATPase | - |
| SE14_RS24930 () | 32000..32338 | - | 339 | WP_000076908.1 | plasmid stabilization protein | - |
| SE14_RS24935 () | 32351..33307 | - | 957 | WP_022630907.1 | recombinase | - |
| SE14_RS24940 () | 33574..33858 | + | 285 | WP_001272820.1 | hypothetical protein | - |
| SE14_RS24945 () | 33858..34664 | + | 807 | WP_000887293.1 | hypothetical protein | - |
| SE14_RS24950 () | 34735..35193 | + | 459 | WP_000243176.1 | hypothetical protein | - |
| SE14_RS24955 () | 35347..35805 | - | 459 | WP_000020025.1 | hypothetical protein | - |
| SE14_RS25760 () | 35822..36127 | - | 306 | WP_001427915.1 | hypothetical protein | - |
| SE14_RS24965 () | 36373..38070 | + | 1698 | WP_001038834.1 | hypothetical protein | - |
| SE14_RS24970 () | 38218..38496 | + | 279 | WP_001396841.1 | Ig-like domain-containing protein | - |
| SE14_RS24975 () | 38564..40222 | + | 1659 | WP_001033848.1 | tail sheath protein | - |
| SE14_RS24980 () | 40266..41000 | + | 735 | WP_000801017.1 | hypothetical protein | - |
| SE14_RS24985 () | 41068..41640 | + | 573 | WP_001112722.1 | hypothetical protein | - |
| SE14_RS24990 () | 41649..42140 | + | 492 | WP_000012433.1 | hypothetical protein | - |
| SE14_RS24995 () | 42195..42746 | + | 552 | WP_000187859.1 | hypothetical protein | - |
| SE14_RS25000 () | 42762..43469 | + | 708 | WP_000021878.1 | hypothetical protein | - |
| SE14_RS25005 () | 43851..44606 | - | 756 | WP_001077897.1 | RepB family plasmid replication initiator protein | - |
| SE14_RS25010 () | 44995..45816 | + | 822 | WP_001025043.1 | hypothetical protein | - |
| SE14_RS25015 () | 45831..49613 | + | 3783 | WP_022630908.1 | structural injection transglycosylase | - |
| SE14_RS25020 () | 49619..49993 | + | 375 | WP_000965099.1 | hypothetical protein | - |
| SE14_RS25025 () | 49990..51420 | + | 1431 | WP_000156306.1 | hypothetical protein | - |
| SE14_RS25030 () | 51431..52276 | + | 846 | WP_000654652.1 | hypothetical protein | - |
| SE14_RS28485 () | 52371..52817 | + | 447 | WP_000829713.1 | hypothetical protein | - |
| SE14_RS25040 () | 52820..54895 | + | 2076 | WP_046891372.1 | tail fiber protein | - |
| SE14_RS25045 () | 54865..55482 | + | 618 | WP_010835343.1 | tail fiber assembly protein | - |
| SE14_RS25050 () | 55487..56020 | - | 534 | WP_022631136.1 | tail fiber assembly protein | - |
| SE14_RS25055 () | 56023..56778 | - | 756 | WP_077941505.1 | phage tail protein | - |
| SE14_RS25060 () | 56763..57323 | - | 561 | WP_000904917.1 | recombinase family protein | - |
| SE14_RS25065 () | 57429..57755 | + | 327 | WP_000457140.1 | holin | - |
| SE14_RS25070 () | 57755..58201 | + | 447 | WP_000526264.1 | hypothetical protein | - |
| SE14_RS25075 () | 58191..58811 | + | 621 | WP_000066531.1 | hypothetical protein | - |
| SE14_RS25080 () | 58804..60789 | + | 1986 | WP_046891373.1 | hypothetical protein | - |
| SE14_RS25085 () | 60789..61157 | + | 369 | WP_000156172.1 | hypothetical protein | - |
| SE14_RS25090 () | 61252..62616 | + | 1365 | WP_001043715.1 | hypothetical protein | - |
| SE14_RS25095 () | 62742..63299 | + | 558 | WP_000094097.1 | DUF4145 domain-containing protein | - |
| SE14_RS25100 () | 63344..63676 | + | 333 | WP_001244352.1 | hypothetical protein | - |
| SE14_RS27955 () | 63761..65443 | + | 1683 | WP_000201469.1 | hypothetical protein | - |
| SE14_RS25110 () | 65457..66455 | + | 999 | WP_001557744.1 | hypothetical protein | - |
| SE14_RS25115 () | 66656..67618 | + | 963 | WP_022630891.1 | hypothetical protein | - |
| SE14_RS27330 () | 68032..68256 | + | 225 | WP_000245715.1 | host cell division inhibitor Icd-like protein | - |
| SE14_RS25125 () | 68256..68963 | + | 708 | WP_000350312.1 | Rha family transcriptional regulator | - |
| SE14_RS25130 () | 68963..69160 | + | 198 | WP_001548248.1 | hypothetical protein | - |
| SE14_RS25135 () | 69192..69677 | - | 486 | WP_001273800.1 | TIGR02594 family protein | - |
| SE14_RS25140 () | 69829..76665 | + | 6837 | WP_022630892.1 | DEAD/DEAH box helicase family protein | - |
| SE14_RS25145 () | 76702..77136 | + | 435 | WP_000209223.1 | hypothetical protein | - |
| SE14_RS25150 () | 77139..77399 | + | 261 | WP_001230915.1 | hypothetical protein | - |
| SE14_RS25605 () | 77653..78030 | + | 378 | WP_099145002.1 | VRR-NUC domain-containing protein | - |
| SE14_RS25160 () | 78260..78541 | + | 282 | WP_046891376.1 | hypothetical protein | - |
| SE14_RS25165 () | 78655..79863 | + | 1209 | WP_000077921.1 | hypothetical protein | - |
| SE14_RS25180 () | 82071..82505 | + | 435 | WP_000467090.1 | TerB family tellurite resistance protein | - |
| SE14_RS28280 () | 82505..82669 | + | 165 | WP_000579539.1 | DUF3927 family protein | - |
| SE14_RS28490 () | 83319..83894 | + | 576 | WP_000928280.1 | hypothetical protein | - |
| SE14_RS28495 () | 83894..84286 | + | 393 | WP_001557741.1 | hypothetical protein | - |
| SE14_RS25205 () | 84395..84787 | + | 393 | WP_000435256.1 | hypothetical protein | - |
| SE14_RS25210 () | 85168..86148 | + | 981 | WP_001096838.1 | hypothetical protein | - |
| SE14_RS25215 () | 86148..87656 | + | 1509 | WP_000897062.1 | terminase | - |
| SE14_RS28500 () | 87684..88721 | - | 1038 | WP_000039385.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|