MGE detailed information
MGE type: Genomic_island MGE length: 26401 bp
Accession: NZ_CP011427 Location: 1328095..1354495 Organism: Pantoea vagans strain ND02 Replicon: chromosome
Accession: NZ_CP011427 Location: 1328095..1354495 Organism: Pantoea vagans strain ND02 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LK04_RS06120 () | 1323662..1324741 | + | 1080 | WP_039327818.1 | dTDP-glucose 4,6-dehydratase | - |
| LK04_RS06125 () | 1324741..1325628 | + | 888 | WP_039327821.1 | dTDP-4-dehydrorhamnose reductase | - |
| LK04_RS06130 () | 1325666..1326547 | + | 882 | WP_039327823.1 | glucose-1-phosphate thymidylyltransferase RfbA | - |
| LK04_RS06135 () | 1326547..1327095 | + | 549 | WP_039327824.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LK04_RS06140 () | 1327148..1328077 | + | 930 | WP_158649442.1 | glycosyltransferase family 2 protein | - |
| LK04_RS06145 () | 1328095..1329390 | + | 1296 | WP_039327826.1 | hypothetical protein | - |
| LK04_RS06150 () | 1329390..1330190 | + | 801 | WP_039327828.1 | ABC transporter permease | - |
| LK04_RS06155 () | 1330195..1330968 | + | 774 | WP_039327831.1 | ABC transporter ATP-binding protein | - |
| LK04_RS06160 () | 1331099..1332508 | + | 1410 | WP_039327832.1 | NADP-dependent phosphogluconate dehydrogenase | - |
| LK04_RS06165 () | 1332722..1336861 | + | 4140 | WP_059109776.1 | class I SAM-dependent methyltransferase | - |
| LK04_RS06170 () | 1336929..1338044 | - | 1116 | WP_039327834.1 | succinylglutamate desuccinylase/aspartoacylase family protein | - |
| LK04_RS06175 () | 1338220..1339017 | - | 798 | WP_039327836.1 | ABC transporter substrate-binding protein | - |
| LK04_RS06180 () | 1339084..1339560 | - | 477 | WP_039327838.1 | YbaK/prolyl-tRNA synthetase associated domain-containing protein | - |
| LK04_RS06185 () | 1339547..1339882 | - | 336 | WP_039327840.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| LK04_RS06190 () | 1339879..1341195 | - | 1317 | WP_039327842.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| LK04_RS06195 () | 1341314..1341925 | - | 612 | WP_039327843.1 | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE | - |
| LK04_RS06200 () | 1341919..1342695 | - | 777 | WP_039327846.1 | imidazole glycerol phosphate synthase subunit HisF | - |
| LK04_RS06205 () | 1342677..1343414 | - | 738 | WP_039327847.1 | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | - |
| LK04_RS06210 () | 1343414..1344004 | - | 591 | WP_039327849.1 | imidazole glycerol phosphate synthase subunit HisH | - |
| LK04_RS06215 () | 1344004..1345071 | - | 1068 | WP_039327852.1 | bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB | - |
| LK04_RS06220 () | 1345068..1346138 | - | 1071 | WP_039327854.1 | histidinol-phosphate transaminase | - |
| LK04_RS06225 () | 1346135..1347442 | - | 1308 | WP_039327856.1 | histidinol dehydrogenase | - |
| LK04_RS06230 () | 1347447..1348346 | - | 900 | WP_034824735.1 | ATP phosphoribosyltransferase | - |
| LK04_RS20630 () | 1348498..1348545 | - | 48 | WP_100396937.1 | his operon leader peptide | - |
| LK04_RS06235 () | 1348726..1349553 | + | 828 | WP_039327860.1 | SDR family oxidoreductase | - |
| LK04_RS06240 () | 1349788..1350837 | + | 1050 | WP_071885733.1 | acyltransferase | - |
| LK04_RS06245 () | 1351520..1352977 | - | 1458 | WP_039327864.1 | glucosyltransferase domain-containing protein | - |
| LK04_RS06250 () | 1353180..1354139 | - | 960 | WP_052205885.1 | glycosyltransferase family 2 protein | - |
| LK04_RS06255 () | 1354139..1354495 | - | 357 | WP_039327866.1 | GtrA family protein | - |
| LK04_RS06260 () | 1354710..1355987 | - | 1278 | WP_039327868.1 | FAD-binding oxidoreductase | - |
| LK04_RS06265 () | 1356012..1356569 | - | 558 | WP_039327869.1 | HTH-type transcriptional regulator PuuR | - |
| LK04_RS06270 () | 1356566..1357330 | - | 765 | WP_039327872.1 | gamma-glutamyl-gamma-aminobutyrate hydrolase | - |
| LK04_RS06275 () | 1357544..1358959 | + | 1416 | WP_039327874.1 | glutamine synthetase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|