MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 68808 bp
Accession: NZ_CP011419 Location: 1105623..1174430 Organism: Streptococcus suis strain NSUI002 Replicon: chromosome
Accession: NZ_CP011419 Location: 1105623..1174430 Organism: Streptococcus suis strain NSUI002 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AA105_RS05650 () | 1101325..1101819 | - | 495 | WP_024383745.1 | PcfB family protein | - |
| AA105_RS05655 () | 1101812..1104406 | - | 2595 | WP_024406075.1 | G5 domain-containing protein | - |
| AA105_RS05660 () | 1104403..1105362 | - | 960 | WP_024383747.1 | hypothetical protein | - |
| AA105_RS05665 () | 1105623..1106828 | - | 1206 | WP_024409315.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| AA105_RS05670 () | 1106831..1107079 | - | 249 | WP_029743105.1 | DUF3173 family protein | - |
| AA105_RS05675 () | 1107349..1107573 | - | 225 | WP_003108992.1 | helix-turn-helix domain-containing protein | - |
| AA105_RS05680 () | 1107820..1108716 | - | 897 | WP_024409316.1 | aldose 1-epimerase family protein | - |
| AA105_RS05685 () | 1108804..1110210 | - | 1407 | WP_024409317.1 | 6-phospho-beta-galactosidase | - |
| AA105_RS05690 () | 1110276..1111979 | - | 1704 | WP_024409318.1 | lactose-specific PTS transporter subunit EIIC | - |
| AA105_RS05695 () | 1111979..1112296 | - | 318 | WP_024409319.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| AA105_RS05700 () | 1112324..1113304 | - | 981 | WP_029743106.1 | tagatose-bisphosphate aldolase | - |
| AA105_RS05705 () | 1113307..1114239 | - | 933 | WP_024409321.1 | tagatose-6-phosphate kinase | - |
| AA105_RS05710 () | 1114251..1114766 | - | 516 | WP_002936382.1 | galactose-6-phosphate isomerase subunit LacB | - |
| AA105_RS05715 () | 1114800..1115225 | - | 426 | WP_003084983.1 | galactose-6-phosphate isomerase subunit LacA | - |
| AA105_RS05720 () | 1115463..1116413 | - | 951 | WP_024409322.1 | ROK family glucokinase | - |
| AA105_RS05725 () | 1116593..1117354 | + | 762 | WP_024409323.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| AA105_RS05730 () | 1117363..1118029 | + | 667 | Protein_1078 | HAD family hydrolase | - |
| AA105_RS05735 () | 1118073..1119938 | - | 1866 | WP_025310409.1 | relaxase/mobilization nuclease domain-containing protein | - |
| AA105_RS05740 () | 1119925..1120290 | - | 366 | WP_024409325.1 | MobC family plasmid mobilization relaxosome protein | - |
| AA105_RS05745 () | 1120300..1120659 | - | 360 | WP_024409326.1 | hypothetical protein | - |
| AA105_RS05750 () | 1120985..1121575 | - | 591 | WP_024409327.1 | hypothetical protein | - |
| AA105_RS05755 () | 1121616..1123529 | - | 1914 | WP_053338584.1 | ATP-dependent helicase | - |
| AA105_RS05760 () | 1123526..1125349 | - | 1824 | Protein_1084 | AAA family ATPase | - |
| AA105_RS05765 () | 1125357..1126301 | - | 945 | WP_024409330.1 | IS30 family transposase IS1252 | Transposase |
| AA105_RS05770 () | 1126392..1126595 | - | 204 | Protein_1086 | AAA family ATPase | - |
| AA105_RS05775 () | 1126576..1127370 | - | 795 | WP_024409332.1 | zeta toxin family protein | Toxin Detail |
| AA105_RS05780 () | 1127370..1127846 | - | 477 | WP_024409333.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| AA105_RS05785 () | 1127916..1128200 | - | 285 | WP_024409334.1 | hypothetical protein | - |
| AA105_RS05790 () | 1128244..1128639 | - | 396 | WP_017285409.1 | hypothetical protein | - |
| AA105_RS05795 () | 1128643..1128870 | - | 228 | WP_024409335.1 | hypothetical protein | - |
| AA105_RS05800 () | 1128924..1130012 | - | 1089 | WP_024409336.1 | toprim domain-containing protein | - |
| AA105_RS05805 () | 1130052..1130690 | - | 639 | WP_024409337.1 | hypothetical protein | - |
| AA105_RS05810 () | 1130801..1131091 | - | 291 | WP_024409338.1 | hypothetical protein | - |
| AA105_RS05815 () | 1131106..1131405 | - | 300 | WP_024382151.1 | hypothetical protein | - |
| AA105_RS05820 () | 1131475..1132386 | - | 912 | WP_032505215.1 | hypothetical protein | - |
| AA105_RS05825 () | 1132401..1134284 | - | 1884 | WP_025310411.1 | IS607 family transposase ISTsi1 | Transposase |
| AA105_RS05830 () | 1134338..1134529 | - | 192 | WP_000503424.1 | hypothetical protein | - |
| AA105_RS05835 () | 1134600..1134830 | - | 231 | WP_000659121.1 | hypothetical protein | - |
| AA105_RS05840 () | 1134907..1135761 | - | 855 | WP_000743701.1 | ParB/RepB/Spo0J family partition protein | - |
| AA105_RS05845 () | 1135769..1136734 | - | 966 | WP_001145977.1 | plasmid recombination protein | - |
| AA105_RS05850 () | 1136916..1138205 | - | 1290 | WP_053338585.1 | AAA family ATPase | - |
| AA105_RS05855 () | 1138359..1138832 | - | 474 | WP_000323521.1 | sigma-70 family RNA polymerase sigma factor | - |
| AA105_RS05860 () | 1138916..1139341 | - | 426 | WP_000323896.1 | sigma-70 family RNA polymerase sigma factor | - |
| AA105_RS05865 () | 1139436..1139945 | - | 510 | WP_053338586.1 | hypothetical protein | VF |
| AA105_RS11605 () | 1140435..1140608 | - | 174 | WP_011528024.1 | cysteine-rich KTR domain-containing protein | - |
| AA105_RS05870 () | 1140660..1142579 | - | 1920 | WP_000691759.1 | Peptide chain release factor 3 | VF |
| AA105_RS05875 () | 1142946..1143320 | - | 375 | WP_001129922.1 | TnpV protein | - |
| AA105_RS05880 () | 1143260..1143991 | - | 732 | WP_024412117.1 | hypothetical protein | - |
| AA105_RS05885 () | 1144087..1144377 | - | 291 | WP_024400601.1 | membrane protein | - |
| AA105_RS05890 () | 1144391..1144690 | - | 300 | WP_024401832.1 | hypothetical protein | - |
| AA105_RS05895 () | 1144761..1146104 | - | 1344 | WP_024401833.1 | helicase C-terminal domain-containing protein | - |
| AA105_RS05900 () | 1146242..1148020 | - | 1779 | WP_024402041.1 | reverse transcriptase/maturase family protein | - |
| AA105_RS05905 () | 1148518..1153980 | - | 5463 | WP_053338587.1 | DEAD/DEAH box helicase family protein | - |
| AA105_RS05910 () | 1154029..1154580 | - | 552 | WP_053338588.1 | hypothetical protein | - |
| AA105_RS05915 () | 1154564..1154755 | - | 192 | WP_053338589.1 | thrombospondin type 3 repeat-containing protein | - |
| AA105_RS05920 () | 1154756..1159651 | - | 4896 | WP_053338590.1 | hypothetical protein | VF |
| AA105_RS05925 () | 1159932..1160522 | + | 591 | WP_024401254.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| AA105_RS05930 () | 1160519..1161364 | + | 846 | WP_024383472.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| AA105_RS05935 () | 1161426..1164227 | - | 2802 | WP_053338591.1 | CHAP domain-containing protein | - |
| AA105_RS05940 () | 1164229..1165191 | - | 963 | WP_074392493.1 | type IV secretion system protein VirB4 | - |
| AA105_RS05945 () | 1165196..1166869 | - | 1674 | WP_029174920.1 | group II intron reverse transcriptase/maturase | - |
| AA105_RS05950 () | 1167398..1168891 | - | 1494 | WP_162489883.1 | type VI secretion protein | - |
| AA105_RS05955 () | 1168848..1169201 | - | 354 | WP_017767989.1 | PrgI family protein | - |
| AA105_RS05960 () | 1169263..1170117 | - | 855 | WP_024399356.1 | conjugal transfer protein TrbL | - |
| AA105_RS05965 () | 1170136..1170378 | - | 243 | WP_001072171.1 | hypothetical protein | - |
| AA105_RS05970 () | 1170396..1172213 | - | 1818 | WP_053338592.1 | type IV secretory system conjugative DNA transfer family protein | - |
| AA105_RS05975 () | 1172213..1172701 | - | 489 | WP_002936460.1 | hypothetical protein | - |
| AA105_RS05980 () | 1172779..1173363 | - | 585 | WP_053338593.1 | CPBP family intramembrane metalloprotease | - |
| AA105_RS05985 () | 1173366..1173599 | - | 234 | WP_001005708.1 | hypothetical protein | - |
| AA105_RS05990 () | 1173608..1173991 | - | 384 | WP_024416082.1 | arsenate reductase | - |
| AA105_RS05995 () | 1174002..1174430 | - | 429 | WP_053338594.1 | hypothetical protein | - |
| AA105_RS06000 () | 1174414..1175769 | - | 1356 | WP_053338595.1 | DNA (cytosine-5-)-methyltransferase | - |
| AA105_RS06005 () | 1175918..1176736 | - | 819 | WP_053338596.1 | replication initiator protein A | - |
| AA105_RS12105 () | 1176739..1176906 | - | 168 | WP_032499127.1 | hypothetical protein | - |
| AA105_RS06015 () | 1177107..1177472 | - | 366 | WP_002936483.1 | 50S ribosomal protein L7/L12 | - |
| AA105_RS06020 () | 1177538..1178032 | - | 495 | WP_002936486.1 | 50S ribosomal protein L10 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|