MGE detailed information
MGE type: Prophage MGE length: 75554 bp
Accession: NZ_CP011416 Location: 4102185..4177738 Organism: Escherichia coli strain CFSAN029787 Replicon: chromosome
Accession: NZ_CP011416 Location: 4102185..4177738 Organism: Escherichia coli strain CFSAN029787 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AA102_RS20520 () | 4099658..4100731 | - | 1074 | WP_000810253.1 | acyltransferase family protein | - |
| AA102_RS20525 () | 4100993..4102192 | + | 1200 | WP_000284709.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| AA102_RS20530 () | 4102185..4102886 | + | 702 | WP_001033694.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| AA102_RS20535 () | 4102886..4104130 | + | 1245 | WP_001251348.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| AA102_RS20540 () | 4104159..4105070 | + | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| AA102_RS20545 () | 4105086..4105907 | + | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| AA102_RS20550 () | 4106046..4106834 | - | 789 | WP_046881149.1 | TPM domain-containing protein | - |
| AA102_RS20555 () | 4106831..4107292 | - | 462 | WP_001341497.1 | DUF3592 domain-containing protein | - |
| AA102_RS20560 () | 4107350..4108396 | - | 1047 | WP_000759318.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| AA102_RS20565 () | 4108393..4109187 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| AA102_RS20570 () | 4109354..4110472 | - | 1119 | WP_000074986.1 | hypothetical protein ; Integrase | Integrase |
| AA102_RS20575 () | 4110441..4110710 | - | 270 | WP_000003742.1 | excisionase | - |
| AA102_RS20580 () | 4110772..4113213 | - | 2442 | WP_046881150.1 | exonuclease | - |
| AA102_RS20585 () | 4113307..4113498 | - | 192 | WP_001098752.1 | DUF1482 family protein | - |
| AA102_RS20590 () | 4113495..4113683 | - | 189 | WP_000449193.1 | cell division inhibition protein DicB | - |
| AA102_RS20595 () | 4113694..4114542 | - | 849 | WP_046881151.1 | Rha family phage regulatory protein | - |
| AA102_RS31785 () | 4115122..4115397 | + | 276 | WP_000102679.1 | hypothetical protein | - |
| AA102_RS20605 () | 4115366..4115695 | - | 330 | WP_046881152.1 | hypothetical protein | - |
| AA102_RS20610 () | 4115718..4115936 | - | 219 | WP_046881153.1 | hypothetical protein | - |
| AA102_RS20615 () | 4116096..4116251 | - | 156 | WP_000379557.1 | DUF1391 family protein | - |
| AA102_RS20620 () | 4116517..4116804 | - | 288 | WP_000938157.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AA102_RS20625 () | 4116805..4116996 | - | 192 | WP_001300743.1 | hypothetical protein | Antitoxin Detail |
| AA102_RS20630 () | 4116965..4117426 | - | 462 | WP_000538414.1 | helix-turn-helix domain-containing protein | - |
| AA102_RS30705 () | 4117457..4117828 | - | 372 | WP_000448217.1 | hypothetical protein | - |
| AA102_RS20645 () | 4117931..4118212 | + | 282 | WP_042188692.1 | helix-turn-helix domain-containing protein | - |
| AA102_RS20650 () | 4118216..4118641 | + | 426 | WP_046881154.1 | Rha family transcriptional regulator | - |
| AA102_RS30710 () | 4118848..4119306 | - | 459 | WP_073801390.1 | hypothetical protein | - |
| AA102_RS20660 () | 4119386..4120495 | + | 1110 | WP_046881155.1 | DNA-binding protein | - |
| AA102_RS20665 () | 4120502..4121248 | + | 747 | WP_046881156.1 | ATP-binding protein | - |
| AA102_RS20670 () | 4121263..4121685 | + | 423 | WP_046881157.1 | DUF977 family protein | - |
| AA102_RS20675 () | 4121709..4122155 | + | 447 | WP_052476150.1 | class I SAM-dependent methyltransferase | - |
| AA102_RS20680 () | 4122495..4122689 | + | 195 | WP_046881536.1 | hypothetical protein | - |
| AA102_RS31790 () | 4122739..4122882 | - | 144 | WP_000206095.1 | hypothetical protein | - |
| AA102_RS27145 () | 4123044..4123601 | - | 558 | WP_052760733.1 | ImmA/IrrE family metallo-endopeptidase | - |
| AA102_RS20690 () | 4123616..4123972 | - | 357 | WP_046881158.1 | helix-turn-helix domain-containing protein | - |
| AA102_RS20695 () | 4124388..4124543 | + | 156 | WP_202967096.1 | type I toxin-antitoxin system Hok family toxin | - |
| AA102_RS29960 () | 4124711..4124989 | + | 279 | WP_046881160.1 | hypothetical protein | - |
| AA102_RS20705 () | 4124991..4126049 | + | 1059 | WP_046881161.1 | DUF968 domain-containing protein | - |
| AA102_RS20710 () | 4126050..4126412 | + | 363 | WP_046881162.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AA102_RS20715 () | 4126421..4126804 | + | 384 | WP_001345623.1 | antitermination protein | - |
| AA102_RS20720 () | 4127073..4127633 | + | 561 | WP_046881163.1 | ORF6N domain-containing protein | - |
| AA102_RS20725 () | 4127858..4128055 | + | 198 | WP_046881164.1 | hypothetical protein | - |
| AA102_RS20730 () | 4128206..4129264 | + | 1059 | WP_046881165.1 | site-specific DNA-methyltransferase | - |
| AA102_RS20755 () | 4130295..4130510 | + | 216 | WP_000284485.1 | class II holin family protein | - |
| AA102_RS29970 () | 4130515..4131045 | + | 531 | WP_000193253.1 | YdfR family protein | - |
| AA102_RS20765 () | 4131367..4131900 | + | 534 | WP_001101165.1 | lysozyme | - |
| AA102_RS31795 () | 4131897..4132364 | + | 468 | WP_001300775.1 | lysis protein | - |
| AA102_RS28595 () | 4132406..4132717 | + | 312 | WP_000708309.1 | DUF4406 domain-containing protein | - |
| AA102_RS20775 () | 4132999..4133859 | + | 861 | WP_046881166.1 | hypothetical protein | - |
| AA102_RS20780 () | 4133983..4134438 | + | 456 | WP_046881167.1 | hypothetical protein | - |
| AA102_RS31800 () | 4135432..4135608 | - | 177 | WP_001205133.1 | hypothetical protein | - |
| AA102_RS20790 () | 4136005..4136514 | + | 510 | WP_000235445.1 | terminase small subunit | - |
| AA102_RS20795 () | 4136486..4138414 | + | 1929 | WP_001026846.1 | phage terminase large subunit family protein | - |
| AA102_RS20800 () | 4138398..4138601 | + | 204 | WP_000259004.1 | head-tail joining protein | - |
| AA102_RS20805 () | 4138598..4140190 | + | 1593 | WP_046880246.1 | phage portal protein | - |
| AA102_RS20810 () | 4140180..4141685 | + | 1506 | WP_001254017.1 | S49 family peptidase | - |
| AA102_RS20815 () | 4141720..4142067 | + | 348 | WP_000256829.1 | head decoration protein | - |
| AA102_RS20820 () | 4142125..4143153 | + | 1029 | WP_000522635.1 | major capsid protein | - |
| AA102_RS20825 () | 4143205..4143606 | + | 402 | WP_000201491.1 | DNA-packaging protein FI | - |
| AA102_RS20830 () | 4143618..4143989 | + | 372 | WP_000753026.1 | tail attachment protein | - |
| AA102_RS20835 () | 4143976..4144560 | + | 585 | WP_000677136.1 | phage tail protein | - |
| AA102_RS20840 () | 4144557..4144958 | + | 402 | WP_001079415.1 | phage minor tail U family protein | - |
| AA102_RS20845 () | 4144969..4145709 | + | 741 | WP_038347324.1 | Ig-like domain-containing protein | - |
| AA102_RS20850 () | 4145768..4146154 | + | 387 | WP_000478927.1 | phage minor tail protein G | - |
| AA102_RS20855 () | 4146163..4146492 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| AA102_RS20860 () | 4146464..4149505 | + | 3042 | WP_046881168.1 | phage tail tape measure protein | - |
| AA102_RS20865 () | 4149505..4149834 | + | 330 | WP_000447266.1 | phage tail protein | - |
| AA102_RS20870 () | 4149834..4150532 | + | 699 | WP_001152598.1 | phage minor tail protein L | - |
| AA102_RS20880 () | 4150537..4151280 | + | 744 | WP_064756675.1 | C40 family peptidase | - |
| AA102_RS20885 () | 4151217..4151819 | + | 603 | WP_000090878.1 | tail assembly protein | - |
| AA102_RS31805 () | 4151880..4153961 | + | 2082 | WP_064756676.1 | host specificity protein J | - |
| AA102_RS31810 () | 4154247..4155336 | + | 1090 | Protein_3907 | DUF1983 domain-containing protein | - |
| AA102_RS31265 () | 4155404..4156002 | + | 599 | Protein_3908 | Ail/Lom family outer membrane beta-barrel protein | - |
| AA102_RS20905 () | 4156062..4157470 | + | 1409 | Protein_3909 | prophage tail fiber N-terminal domain-containing protein | - |
| AA102_RS20910 () | 4157421..4158044 | + | 624 | WP_046881169.1 | DUF4376 domain-containing protein | - |
| AA102_RS20920 () | 4158224..4159974 | - | 1751 | Protein_3911 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| AA102_RS20930 () | 4160575..4160823 | - | 249 | WP_001217553.1 | DinI-like family protein | - |
| AA102_RS20940 () | 4161178..4161744 | - | 567 | WP_000891610.1 | hydrolase | - |
| AA102_RS20945 () | 4162054..4163826 | + | 1773 | WP_001258662.1 | aspartate--tRNA ligase | - |
| AA102_RS20950 () | 4163944..4164396 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| AA102_RS20955 () | 4164425..4165165 | + | 741 | WP_000907234.1 | putative transcriptional regulatory protein YebC | VF |
| AA102_RS20960 () | 4165200..4165721 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| AA102_RS20965 () | 4165723..4166325 | - | 603 | WP_001024910.1 | YebB family permuted papain-like enzyme | - |
| AA102_RS29995 () | 4166396..4166461 | + | 66 | WP_001386853.1 | stress response small protein YobI | - |
| AA102_RS20970 () | 4166600..4167211 | + | 612 | WP_000580328.1 | Holliday junction branch migration protein RuvA | - |
| AA102_RS20975 () | 4167220..4168230 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| AA102_RS20980 () | 4168377..4169162 | - | 786 | WP_000571465.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| AA102_RS20985 () | 4169159..4169914 | - | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| AA102_RS20990 () | 4169993..4170925 | + | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| AA102_RS20995 () | 4170941..4172263 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| AA102_RS21000 () | 4172383..4173354 | + | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| AA102_RS21005 () | 4173486..4174928 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| AA102_RS21010 () | 4175056..4175925 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| AA102_RS21020 () | 4176263..4177738 | + | 1476 | WP_046881171.1 | glucose-6-phosphate dehydrogenase | - |
| AA102_RS21025 () | 4177973..4179784 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| AA102_RS21030 () | 4179821..4180462 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| AA102_RS21035 () | 4180518..4181696 | - | 1179 | WP_000173494.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| AA102_RS21040 () | 4181830..4182120 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| AA102_RS21045 () | 4182187..4182543 | + | 357 | WP_001295500.1 | protein YebF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|