MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 68224 bp
Accession: NZ_CP011399 Location: 1..68224 Organism: Listeria monocytogenes strain CFSAN008100 Replicon: plasmid pCFSAN008100
Accession: NZ_CP011399 Location: 1..68224 Organism: Listeria monocytogenes strain CFSAN008100 Replicon: plasmid pCFSAN008100
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CY94_RS15580 () | 105..989 | + | 885 | WP_061449523.1 | hypothetical protein | - |
| CY94_RS15585 () | 979..2070 | + | 1092 | WP_046811196.1 | hypothetical protein | - |
| CY94_RS15590 () | 2121..2426 | + | 306 | WP_003733957.1 | hypothetical protein | - |
| CY94_RS15595 () | 2426..2707 | + | 282 | WP_003723294.1 | phage holin | - |
| CY94_RS15600 () | 2707..3414 | + | 708 | WP_025370596.1 | M15 family metallopeptidase | - |
| CY94_RS15605 () | 3562..4263 | + | 702 | WP_025370597.1 | DUF3800 domain-containing protein | - |
| CY94_RS15610 () | 4742..4975 | + | 234 | WP_014930932.1 | hypothetical protein | - |
| CY94_RS15615 () | 4972..5163 | + | 192 | WP_031672409.1 | hypothetical protein | - |
| CY94_RS15620 () | 5609..7164 | - | 1556 | Protein_8 | IS3 family transposase | - |
| CY94_RS15625 () | 7254..10169 | - | 2916 | WP_003728469.1 | Tn3 family transposase | - |
| CY94_RS15630 () | 10173..10727 | - | 555 | WP_003728468.1 | recombinase family protein | - |
| CY94_RS15635 () | 11007..11366 | + | 360 | WP_003728467.1 | Cd(II)-sensing metalloregulatory transcriptional repressor CadC | - |
| CY94_RS15640 () | 11366..13501 | + | 2136 | WP_003728466.1 | cadmium-translocating P-type ATPase | - |
| CY94_RS15645 () | 13694..14035 | - | 342 | WP_003728465.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| CY94_RS15650 () | 14029..14271 | - | 243 | WP_003728464.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CY94_RS15655 () | 14332..14583 | - | 252 | WP_003728463.1 | hypothetical protein | - |
| CY94_RS15660 () | 14714..15040 | + | 327 | WP_003728462.1 | hypothetical protein | - |
| CY94_RS15665 () | 15040..15702 | + | 663 | WP_003731676.1 | DUF2786 domain-containing protein | - |
| CY94_RS15670 () | 15721..16098 | + | 378 | WP_003769263.1 | DUF3850 domain-containing protein | - |
| CY94_RS15675 () | 16257..16745 | + | 489 | WP_003728520.1 | hypothetical protein | - |
| CY94_RS15680 () | 16867..17115 | + | 249 | WP_003728519.1 | hypothetical protein | - |
| CY94_RS15685 () | 17116..17541 | + | 426 | WP_003728518.1 | hypothetical protein | - |
| CY94_RS15690 () | 17545..18267 | + | 723 | WP_003728517.1 | CRISPR-associated protein Cas5 | - |
| CY94_RS15695 () | 18283..18999 | + | 717 | WP_003731678.1 | AP2 domain-containing protein | - |
| CY94_RS15700 () | 19173..19976 | - | 804 | Protein_24 | IS3 family transposase | - |
| CY94_RS15705 () | 19973..20227 | - | 255 | WP_003728514.1 | transposase | - |
| CY94_RS15710 () | 20751..22517 | + | 1767 | WP_003728513.1 | hypothetical protein | - |
| CY94_RS15715 () | 22529..23269 | + | 741 | WP_003728512.1 | hypothetical protein | - |
| CY94_RS15720 () | 23557..24165 | + | 609 | WP_003728511.1 | recombinase family protein | - |
| CY94_RS15725 () | 24155..24382 | + | 228 | WP_003728510.1 | hypothetical protein | - |
| CY94_RS15730 () | 24502..24780 | - | 279 | WP_003731679.1 | hypothetical protein | - |
| CY94_RS15735 () | 24743..24979 | + | 237 | WP_003728509.1 | helix-turn-helix domain-containing protein | - |
| CY94_RS15740 () | 25407..27521 | + | 2115 | WP_003728507.1 | ATP-dependent Clp protease ATP-binding subunit | - |
| CY94_RS15745 () | 27797..29137 | + | 1341 | WP_013315188.1 | IS3 family transposase | - |
| CY94_RS15750 () | 29312..30046 | + | 735 | WP_003728505.1 | AAA family ATPase | - |
| CY94_RS15755 () | 30251..30595 | + | 345 | WP_003728504.1 | hypothetical protein | - |
| CY94_RS15760 () | 30583..31863 | + | 1281 | WP_003728503.1 | Y-family DNA polymerase | - |
| CY94_RS15765 () | 31914..32210 | - | 297 | WP_003728502.1 | hypothetical protein | - |
| CY94_RS15770 () | 32188..33162 | - | 975 | WP_003728501.1 | AAA family ATPase | - |
| CY94_RS15775 () | 33902..35536 | + | 1635 | WP_003728500.1 | primase C-terminal domain-containing protein | - |
| CY94_RS15780 () | 35811..36566 | + | 756 | WP_003728499.1 | hypothetical protein | - |
| CY94_RS15785 () | 36600..37187 | - | 588 | WP_023553716.1 | IS3 family transposase | - |
| CY94_RS15790 () | 37279..38034 | - | 756 | WP_013315180.1 | IS21-like element helper ATPase IstB | - |
| CY94_RS15795 () | 38045..39271 | - | 1227 | WP_003728496.1 | IS21 family transposase | - |
| CY94_RS16135 () | 39372..39599 | + | 228 | Protein_44 | C40 family peptidase | - |
| CY94_RS15805 () | 39615..39851 | + | 237 | WP_003728495.1 | hypothetical protein | - |
| CY94_RS15810 () | 39814..40203 | + | 390 | WP_003731844.1 | hypothetical protein | - |
| CY94_RS15815 () | 40206..41123 | + | 918 | WP_003728493.1 | hypothetical protein | - |
| CY94_RS15820 () | 41521..41760 | + | 240 | WP_003728492.1 | hypothetical protein | - |
| CY94_RS15825 () | 41772..42212 | + | 441 | WP_003728491.1 | hypothetical protein | - |
| CY94_RS15830 () | 42205..43545 | + | 1341 | WP_003728490.1 | hypothetical protein | - |
| CY94_RS15835 () | 43556..43927 | + | 372 | WP_003728489.1 | hypothetical protein | - |
| CY94_RS15840 () | 43947..44711 | + | 765 | WP_012952172.1 | Fic family protein | - |
| CY94_RS15845 () | 44825..45355 | + | 531 | WP_003728487.1 | hypothetical protein | - |
| CY94_RS15850 () | 45392..45727 | - | 336 | WP_003728486.1 | helix-turn-helix domain-containing protein | - |
| CY94_RS15855 () | 45901..46299 | + | 399 | WP_011011011.1 | hypothetical protein | - |
| CY94_RS15860 () | 47012..47356 | + | 345 | WP_012952173.1 | TnpV protein | - |
| CY94_RS15865 () | 47398..47805 | + | 408 | WP_072235488.1 | hypothetical protein | - |
| CY94_RS15870 () | 47890..48321 | + | 432 | Protein_58 | transposase | - |
| CY94_RS15875 () | 48371..49051 | - | 681 | WP_002389568.1 | IS6 family transposase | - |
| CY94_RS15880 () | 49129..49392 | - | 264 | Protein_60 | hypothetical protein | - |
| CY94_RS15885 () | 49643..50206 | - | 564 | WP_003728472.1 | recombinase family protein | - |
| CY94_RS15890 () | 50780..51145 | + | 366 | WP_031644250.1 | YobA family protein | - |
| CY94_RS15895 () | 51166..52464 | + | 1299 | WP_031641532.1 | hypothetical protein | - |
| CY94_RS15900 () | 52864..53220 | - | 357 | WP_003725288.1 | VOC family protein | - |
| CY94_RS15905 () | 53371..53946 | - | 576 | Protein_65 | recombinase family protein | - |
| CY94_RS15910 () | 54146..54493 | - | 348 | WP_171819450.1 | quaternary ammonium compound efflux SMR transporter BcrC | - |
| CY94_RS15915 () | 54508..54825 | - | 318 | WP_003725293.1 | quaternary ammonium compound efflux SMR transporter BcrB | - |
| CY94_RS15920 () | 54837..55376 | - | 540 | WP_003725294.1 | efflux transporter transcriptional regulator BcrA | - |
| CY94_RS15925 () | 55817..56056 | + | 240 | WP_031644247.1 | hypothetical protein | - |
| CY94_RS15930 () | 56234..57388 | - | 1155 | WP_046811282.1 | site-specific integrase | - |
| CY94_RS15935 () | 57520..58092 | - | 573 | WP_046811283.1 | hypothetical protein | - |
| CY94_RS15940 () | 58144..58596 | - | 453 | WP_052750973.1 | ImmA/IrrE family metallo-endopeptidase | - |
| CY94_RS15945 () | 58613..58936 | - | 324 | WP_003730992.1 | helix-turn-helix domain-containing protein | - |
| CY94_RS16060 () | 59217..59372 | + | 156 | WP_159420750.1 | hypothetical protein | - |
| CY94_RS15950 () | 59396..59713 | - | 318 | WP_025370565.1 | hypothetical protein | - |
| CY94_RS15955 () | 59779..59982 | + | 204 | WP_009929536.1 | helix-turn-helix transcriptional regulator | - |
| CY94_RS15960 () | 59984..60226 | + | 243 | WP_015987310.1 | hypothetical protein | - |
| CY94_RS15965 () | 60229..60414 | + | 186 | WP_023548967.1 | hypothetical protein | - |
| CY94_RS16140 () | 60649..60801 | + | 153 | WP_009929542.1 | hypothetical protein | - |
| CY94_RS15970 () | 60938..61651 | + | 714 | WP_023548965.1 | type I restriction-modification system subunit M | - |
| CY94_RS15975 () | 61662..62606 | + | 945 | WP_023548963.1 | site-specific integrase | - |
| CY94_RS15980 () | 62619..63299 | + | 681 | WP_009928035.1 | hypothetical protein | - |
| CY94_RS15985 () | 63296..63871 | + | 576 | WP_023548961.1 | DUF1642 domain-containing protein | - |
| CY94_RS15990 () | 63864..64052 | + | 189 | WP_023548959.1 | hypothetical protein | - |
| CY94_RS16145 () | 64049..64195 | + | 147 | WP_165442474.1 | hypothetical protein | - |
| CY94_RS15995 () | 64214..64420 | + | 207 | WP_031643753.1 | hypothetical protein | - |
| CY94_RS16000 () | 64407..64811 | + | 405 | WP_046811284.1 | hypothetical protein | - |
| CY94_RS16150 () | 64815..64988 | + | 174 | WP_003731701.1 | hypothetical protein | - |
| CY94_RS16005 () | 64985..65698 | + | 714 | WP_046811189.1 | pentapeptide repeat-containing protein | - |
| CY94_RS16010 () | 65676..66212 | + | 537 | Protein_90 | DUF1642 domain-containing protein | - |
| CY94_RS16015 () | 66251..66730 | + | 480 | WP_012951530.1 | hypothetical protein | - |
| CY94_RS16020 () | 66731..67359 | + | 629 | Protein_92 | hypothetical protein | - |
| CY94_RS16030 () | 67607..67833 | + | 227 | Protein_93 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|