MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 59336 bp
Accession: NZ_CP011395 Location: 1..59336 Organism: Salmonella enterica subsp. enterica serovar Enteritidis str. 18569 Replicon: plasmid pCFSAN000006
Accession: NZ_CP011395 Location: 1..59336 Organism: Salmonella enterica subsp. enterica serovar Enteritidis str. 18569 Replicon: plasmid pCFSAN000006
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SEE18569_RS22705 () | 815..1789 | + | 975 | WP_000064277.1 | ParB/RepB/Spo0J family partition protein | - |
| SEE18569_RS25335 () | 1870..3140 | - | 1271 | Protein_2 | Y-family DNA polymerase | - |
| SEE18569_RS22715 () | 3140..3557 | - | 418 | Protein_3 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| SEE18569_RS22720 () | 3827..5616 | + | 1790 | Protein_4 | ParB/RepB/Spo0J family partition protein | - |
| SEE18569_RS25365 () | 5616..5773 | + | 158 | Protein_5 | recombinase | - |
| SEE18569_RS22725 () | 5710..6351 | + | 642 | Protein_6 | plasmid SOS inhibition protein A | - |
| SEE18569_RS25470 () | 6257..6811 | - | 555 | WP_162487926.1 | hypothetical protein | - |
| SEE18569_RS25570 () | 6857..7676 | + | 820 | Protein_8 | DUF945 domain-containing protein | - |
| SEE18569_RS22740 () | 7987..8457 | - | 471 | WP_015056628.1 | transglycosylase SLT domain-containing protein | - |
| SEE18569_RS22750 () | 8876..9255 | + | 380 | Protein_10 | relaxosome protein TraM | - |
| SEE18569_RS22755 () | 9449..10134 | + | 686 | Protein_11 | PAS domain-containing protein | - |
| SEE18569_RS22760 () | 10228..10455 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| SEE18569_RS22765 () | 10497..10859 | + | 363 | WP_001274199.1 | type IV conjugative transfer system pilin TraA | - |
| SEE18569_RS22770 () | 10874..11185 | + | 312 | WP_000012130.1 | type IV conjugative transfer system protein TraL | - |
| SEE18569_RS22775 () | 11207..11773 | + | 567 | WP_001679518.1 | type IV conjugative transfer system protein TraE | - |
| SEE18569_RS22780 () | 11760..12500 | + | 741 | WP_001230718.1 | type-F conjugative transfer system secretin TraK | - |
| SEE18569_RS22785 () | 12500..13922 | + | 1423 | Protein_17 | conjugal transfer protein TraB | - |
| SEE18569_RS22790 () | 13912..14508 | + | 597 | WP_000527901.1 | conjugal transfer protein TraP | - |
| SEE18569_RS22795 () | 14486..14710 | + | 225 | WP_016716015.1 | DUF2689 domain-containing protein | - |
| SEE18569_RS22800 () | 14707..15221 | + | 515 | Protein_20 | type IV conjugative transfer system lipoprotein TraV | - |
| SEE18569_RS22805 () | 15301..15723 | + | 423 | Protein_21 | fertility inhibition protein FinO | - |
| SEE18569_RS22810 () | 15840..16292 | + | 453 | WP_000477657.1 | DSBA oxidoreductase | - |
| SEE18569_RS24525 () | 16414..16698 | + | 285 | WP_001676658.1 | hypothetical protein | - |
| SEE18569_RS24530 () | 16655..16894 | + | 240 | WP_077681954.1 | phospholipase | - |
| SEE18569_RS22820 () | 17073..17339 | + | 267 | WP_016710725.1 | replication regulatory protein RepA | - |
| SEE18569_RS22830 () | 17589..17666 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| SEE18569_RS22835 () | 17647..18528 | + | 882 | WP_001676666.1 | incFII family plasmid replication initiator RepA | - |
| SEE18569_RS24540 () | 19384..19605 | + | 222 | WP_071530245.1 | SdiA-regulated domain-containing protein | - |
| SEE18569_RS22840 () | 19702..20448 | - | 747 | WP_000417897.1 | AraC family transcriptional regulator | - |
| SEE18569_RS22845 () | 20714..21271 | - | 558 | WP_000725064.1 | complement resistance protein Rck | - |
| SEE18569_RS22850 () | 21361..22206 | - | 846 | WP_001701740.1 | YjiK family protein | - |
| SEE18569_RS25575 () | 22257..22403 | - | 147 | WP_001141717.1 | hypothetical protein | - |
| SEE18569_RS22855 () | 22393..23049 | - | 657 | WP_077907617.1 | DsbA family protein | - |
| SEE18569_RS22860 () | 23293..23643 | - | 351 | WP_000135399.1 | helix-turn-helix transcriptional regulator | - |
| SEE18569_RS22865 () | 23628..23840 | - | 213 | WP_000004289.1 | transcriptional regulator PefI | - |
| SEE18569_RS22870 () | 24100..24954 | - | 855 | WP_001680213.1 | hypothetical protein | - |
| SEE18569_RS22875 () | 25137..25715 | - | 579 | WP_000085742.1 | hypothetical protein | - |
| SEE18569_RS22880 () | 25712..26404 | - | 693 | WP_001038509.1 | fimbrial chaperone PefD | - |
| SEE18569_RS22885 () | 26397..28805 | - | 2409 | WP_000007891.1 | outer membrane usher protein PefC | - |
| SEE18569_RS22890 () | 29032..29556 | - | 525 | WP_000748204.1 | fimbrial protein | - |
| SEE18569_RS22895 () | 29831..30133 | - | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| SEE18569_RS25030 () | 30162..30473 | + | 312 | WP_015059605.1 | hypothetical protein | - |
| SEE18569_RS22905 () | 30840..31226 | + | 387 | WP_000751876.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| SEE18569_RS24545 () | 31279..31440 | + | 162 | WP_015059604.1 | hypothetical protein | - |
| SEE18569_RS22910 () | 31767..32756 | - | 990 | WP_000461382.1 | RepB family plasmid replication initiator protein | - |
| SEE18569_RS25035 () | 33250..33545 | - | 296 | Protein_46 | cytoplasmic protein | - |
| SEE18569_RS25580 () | 33557..33985 | + | 429 | Protein_47 | hypothetical protein | - |
| SEE18569_RS22925 () | 34029..34550 | - | 522 | WP_077681952.1 | hypothetical protein | - |
| SEE18569_RS22930 () | 35226..35444 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| SEE18569_RS22935 () | 35446..35751 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| SEE18569_RS22940 () | 35753..36043 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| SEE18569_RS22945 () | 36040..36561 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| SEE18569_RS22950 () | 36596..37378 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| SEE18569_RS22955 () | 37387..38100 | + | 714 | WP_000545756.1 | EAL domain-containing protein | - |
| SEE18569_RS22960 () | 38104..38613 | + | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| SEE18569_RS22965 () | 38607..39092 | + | 486 | WP_000905606.1 | membrane protein | - |
| SEE18569_RS24555 () | 39369..39656 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| SEE18569_RS22975 () | 39812..40372 | + | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| SEE18569_RS22980 () | 40439..40789 | - | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| SEE18569_RS22985 () | 40846..41271 | + | 426 | WP_000064919.1 | IS200/IS605 family transposase | - |
| SEE18569_RS22990 () | 41398..42048 | - | 651 | WP_001676646.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| SEE18569_RS22995 () | 42310..43035 | - | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| SEE18569_RS23000 () | 43316..45091 | - | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| SEE18569_RS25585 () | 45143..45310 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| SEE18569_RS23005 () | 45273..46040 | - | 768 | WP_001676649.1 | virulence protein SpvA | - |
| SEE18569_RS23010 () | 46214..46378 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| SEE18569_RS23015 () | 46552..47445 | - | 894 | WP_000346690.1 | virulence genes transcriptional activator SpvR | - |
| SEE18569_RS23020 () | 48053..49090 | + | 1038 | WP_001121400.1 | IS630 family transposase | - |
| SEE18569_RS23025 () | 49279..50304 | - | 1026 | WP_077907510.1 | ExeA family protein | - |
| SEE18569_RS23030 () | 50237..51901 | - | 1665 | WP_000098781.1 | IS481 family transposase | - |
| SEE18569_RS23035 () | 51885..52445 | - | 561 | WP_001240330.1 | recombinase family protein | - |
| SEE18569_RS23040 () | 52652..53392 | - | 741 | WP_001541566.1 | carbonic anhydrase | - |
| SEE18569_RS23045 () | 54047..54535 | - | 489 | WP_001135409.1 | hypothetical protein | - |
| SEE18569_RS23050 () | 54793..55908 | + | 1116 | WP_001247117.1 | DNA-binding protein | - |
| SEE18569_RS23055 () | 55994..56410 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| SEE18569_RS23060 () | 56594..56929 | + | 336 | WP_001527010.1 | hypothetical protein | - |
| SEE18569_RS23065 () | 56986..57591 | + | 606 | WP_000176303.1 | DUF2913 family protein | - |
| SEE18569_RS23070 () | 57588..58529 | - | 942 | WP_000728919.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|