MGE detailed information
MGE type: Prophage MGE length: 36756 bp
Accession: NZ_CP011343 Location: 1600970..1637725 Organism: Escherichia coli K-12 substr. GM4792 Replicon: chromosome
Accession: NZ_CP011343 Location: 1600970..1637725 Organism: Escherichia coli K-12 substr. GM4792 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U069_RS07895 () | 1596744..1597859 | + | 1116 | WP_000258599.1 | putative protein YneK | - |
| U069_RS07900 () | 1598009..1599199 | + | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| U069_RS07905 () | 1599224..1599889 | - | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| U069_RS07910 () | 1600101..1600535 | + | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| U069_RS07915 () | 1600555..1600938 | + | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| U069_RS07920 () | 1600970..1601188 | + | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| U069_RS07925 () | 1601219..1602118 | - | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| U069_RS07930 () | 1602313..1603500 | + | 1188 | WP_001054204.1 | efflux MFS transporter YdeE | - |
| U069_RS07935 () | 1603627..1603722 | + | 96 | WP_000901367.1 | protein MgtS | - |
| U069_RS25860 () | 1603722..1603826 | + | 105 | WP_211180496.1 | protein MgtT | - |
| U069_RS07940 () | 1603941..1604831 | - | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| U069_RS07945 () | 1605086..1605478 | - | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| U069_RS07950 () | 1605754..1606272 | + | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| U069_RS07955 () | 1606316..1608361 | - | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| U069_RS07960 () | 1608498..1609244 | + | 747 | WP_000636571.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| U069_RS07965 () | 1609333..1610019 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| U069_RS07970 () | 1610196..1610399 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| U069_RS07975 () | 1610434..1611894 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| U069_RS07980 () | 1611983..1613350 | - | 1368 | Protein_1523 | MHS family MFS transporter | - |
| U069_RS25400 () | 1613871..1613984 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| U069_RS07985 () | 1614053..1614286 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| U069_RS07990 () | 1614603..1615193 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| U069_RS07995 () | 1615291..1615866 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| U069_RS08000 () | 1615866..1616828 | - | 963 | WP_001027733.1 | phage tail protein | - |
| U069_RS08005 () | 1616779..1617348 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| U069_RS08010 () | 1617737..1617970 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| U069_RS08015 () | 1618028..1618438 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| U069_RS08020 () | 1618590..1618763 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| U069_RS08025 () | 1618935..1619090 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| U069_RS25405 () | 1619169..1619234 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| U069_RS23575 () | 1619237..1619425 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| U069_RS08030 () | 1619436..1619648 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| U069_RS08035 () | 1620011..1620508 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| U069_RS08040 () | 1620505..1621038 | - | 534 | WP_001092971.1 | lysozyme | - |
| U069_RS08045 () | 1621035..1621346 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| U069_RS08050 () | 1621351..1621566 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| U069_RS25865 () | 1621786..1621956 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| U069_RS08055 () | 1622320..1622535 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| U069_RS08060 () | 1622836..1623048 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| U069_RS25410 () | 1623103..1623192 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| U069_RS08065 () | 1623470..1624222 | - | 753 | WP_001047135.1 | antitermination protein | - |
| U069_RS08070 () | 1624236..1625285 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| U069_RS08075 () | 1625287..1625565 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| U069_RS08080 () | 1625632..1625883 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| U069_RS08085 () | 1626100..1626255 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| U069_RS08090 () | 1626327..1626614 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| U069_RS08095 () | 1626614..1626853 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| U069_RS23580 () | 1626878..1627183 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| U069_RS08100 () | 1627386..1627718 | + | 333 | WP_001301033.1 | protein FlxA | - |
| U069_RS22885 () | 1628155..1628304 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| U069_RS08105 () | 1628339..1628617 | - | 279 | Protein_1555 | hypothetical protein | - |
| U069_RS08110 () | 1628601..1628831 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| U069_RS08115 () | 1628915..1629322 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| U069_RS08120 () | 1629489..1629644 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| U069_RS08125 () | 1629804..1630022 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| U069_RS08135 () | 1630590..1630778 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| U069_RS08140 () | 1630775..1630966 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| U069_RS23595 () | 1631059..1631826 | + | 768 | Protein_1562 | exonuclease | - |
| U069_RS08150 () | 1631823..1632518 | + | 696 | Protein_1563 | IS3 family transposase IS2 | Transposase |
| U069_RS25420 () | 1632532..1633689 | + | 1158 | Protein_1564 | Tyrosine recombinase XerD ; Integrase | Integrase |
| U069_RS24890 () | 1633709..1633819 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| U069_RS08160 () | 1633877..1634896 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| U069_RS08165 () | 1634908..1636122 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| U069_RS08170 () | 1636328..1636654 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| U069_RS08175 () | 1636789..1637130 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| U069_RS08180 () | 1637165..1637725 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| U069_RS08185 () | 1637728..1638438 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| U069_RS08190 () | 1638546..1638851 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| U069_RS08195 () | 1639050..1641476 | + | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|