NZ_CP0113221573328..1584928

MGE detailed information

MGE type: Genomic_island        MGE length: 11601 bp
Accession: NZ_CP011322        Location: 1573328..1584928         Organism: Escherichia coli strain SQ110       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
SG46_RS07620 () 1570143..1571828 - 1686 WP_000628576.1 ABC transporter ATP-binding protein/permease -
SG46_RS07625 () 1572031..1572153 + 123 WP_120795387.1 protein YneP -
SG46_RS07630 () 1572119..1573276 - 1158 WP_001301030.1 anaerobic sulfatase maturase -
SG46_RS07635 () 1573328..1575010 - 1683 WP_001295684.1 sulfatase -
SG46_RS07640 () 1575412..1576173 - 762 WP_000060495.1 acid stress response transcriptional regulator YdeO -
SG46_RS07645 () 1576248..1576445 - 198 WP_000543384.1 two-component system connector SafA -
SG46_RS07650 () 1576693..1578972 - 2280 WP_000726691.1 acid resistance putative oxidoreductase YdeP -
SG46_RS07655 () 1579306..1580220 - 915 WP_000520676.1 Type 1 fimbrin D-mannose specific adhesin VF
SG46_RS07660 () 1580279..1580782 - 504 WP_000825452.1 Protein FimG VF
SG46_RS07665 () 1580795..1581325 - 531 WP_000876763.1 Protein FimF VF
SG46_RS07670 () 1581339..1582565 - 1227 Protein_1502 Outer membrane usher protein FimD VF
SG46_RS07675 () 1582820..1583028 - 209 Protein_1503 helix-turn-helix transcriptional regulator -
SG46_RS07680 () 1583340..1584662 - 1323 WP_001125439.1 type II toxin-antitoxin system serine/threonine protein kinase toxin HipA Toxin Detail
SG46_RS07685 () 1584662..1584928 - 267 WP_001301023.1 type II toxin-antitoxin system antitoxin HipB Antitoxin Detail
SG46_RS07690 () 1585151..1586551 - 1401 WP_001083595.1 autotransporter outer membrane beta-barrel domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20025 CP009789 1561271..1572871 0
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20066 HG738867 1469371..1480971 0
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1040 NC_000913 1580842..1592442 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21437 NC_007779 1582556..1594156 0
Escherichia coli HS Genomic island TA22421 NC_009800 1597665..1609265 0.003
Escherichia coli str. K-12 substr. DH10B Genomic island TA22685 NC_010473 1669461..1680091 0.002
Escherichia coli BW2952 Genomic island TA23853 NC_012759 1470925..1482525 0
Escherichia coli DH1 Genomic island TA27403 NC_017638 1563024..1574624 0
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29002 NC_020518 1287669..1299269 0
Escherichia coli BW25113 Genomic island TA48682 NZ_CP009273 1575099..1586699 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68424 NZ_CP017979 1484612..1496212 0
Escherichia coli strain DH5alpha Genomic island TA90478 NZ_CP025520 438284..449884 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285016 NZ_HG738867 1469371..1480971 0