MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 54635 bp
Accession: NZ_CP011310 Location: 2744192..2798826 Organism: Aurantiacibacter atlanticus strain s21-N3 Replicon: chromosome
Accession: NZ_CP011310 Location: 2744192..2798826 Organism: Aurantiacibacter atlanticus strain s21-N3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP97_RS13400 () | 2740112..2740732 | + | 621 | WP_048886360.1 | riboflavin synthase | - |
| CP97_RS13405 () | 2740729..2741288 | - | 560 | Protein_2626 | GNAT family N-acetyltransferase | - |
| CP97_RS13410 () | 2741290..2741538 | - | 249 | WP_048886361.1 | hypothetical protein | - |
| CP97_RS13415 () | 2741617..2742804 | - | 1188 | WP_048886362.1 | aspartate/tyrosine/aromatic aminotransferase | - |
| CP97_RS13420 () | 2742909..2743703 | - | 795 | WP_048886363.1 | DUF1134 domain-containing protein | - |
| CP97_RS13430 () | 2744192..2745340 | + | 1149 | WP_048887027.1 | site-specific integrase | - |
| CP97_RS13435 () | 2745649..2746590 | - | 942 | WP_048886364.1 | retron St85 family RNA-directed DNA polymerase | - |
| CP97_RS13450 () | 2746904..2748075 | + | 1172 | WP_149036385.1 | IS3 family transposase | - |
| CP97_RS13455 () | 2748020..2748784 | - | 765 | WP_149036487.1 | retron St85 family effector protein | - |
| CP97_RS13460 () | 2749774..2752713 | - | 2940 | WP_048886367.1 | conjugative relaxase | - |
| CP97_RS13465 () | 2752717..2753022 | - | 306 | WP_048886368.1 | hypothetical protein | - |
| CP97_RS13475 () | 2753745..2755109 | - | 1365 | WP_048886369.1 | hypothetical protein | - |
| CP97_RS13480 () | 2755310..2756041 | - | 732 | WP_048886370.1 | hypothetical protein | - |
| CP97_RS13485 () | 2756070..2756339 | - | 270 | WP_048886371.1 | hypothetical protein | - |
| CP97_RS13490 () | 2756336..2759908 | - | 3573 | WP_149036488.1 | hypothetical protein | - |
| CP97_RS13495 () | 2759984..2763103 | - | 3120 | WP_149036489.1 | DEAD/DEAH box helicase family protein | - |
| CP97_RS13500 () | 2763232..2764503 | - | 1272 | WP_048886374.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| CP97_RS13505 () | 2764500..2764757 | - | 258 | WP_048886375.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| CP97_RS13510 () | 2765177..2765392 | - | 216 | WP_048886376.1 | hypothetical protein | - |
| CP97_RS13515 () | 2765556..2766224 | - | 669 | WP_048886377.1 | OmpW family protein | - |
| CP97_RS13520 () | 2766462..2767775 | + | 1314 | WP_174539184.1 | oxygen-independent coproporphyrinogen III oxidase | - |
| CP97_RS13525 () | 2768155..2768445 | - | 291 | WP_063612450.1 | hypothetical protein | - |
| CP97_RS13530 () | 2768593..2769141 | - | 549 | WP_048886380.1 | DUF389 domain-containing protein | - |
| CP97_RS13535 () | 2769541..2771907 | - | 2367 | WP_048886381.1 | TonB-dependent receptor | - |
| CP97_RS13540 () | 2772070..2773728 | - | 1659 | WP_082863832.1 | acyl--CoA ligase | - |
| CP97_RS13545 () | 2774035..2775105 | - | 1071 | WP_161485470.1 | thiolase family protein | - |
| CP97_RS13550 () | 2775205..2775642 | - | 438 | WP_082863925.1 | hypothetical protein | - |
| CP97_RS13555 () | 2775720..2777024 | - | 1305 | WP_048886386.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| CP97_RS13560 () | 2777094..2777741 | - | 648 | WP_048886387.1 | TetR family transcriptional regulator | - |
| CP97_RS16345 () | 2778467..2778649 | - | 183 | WP_048886388.1 | hypothetical protein | - |
| CP97_RS13570 () | 2778927..2779694 | + | 768 | WP_048886389.1 | SDR family oxidoreductase | - |
| CP97_RS13575 () | 2780257..2781423 | + | 1167 | WP_048886391.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CP97_RS13580 () | 2781427..2781798 | + | 372 | WP_048886392.1 | glycine cleavage system protein GcvH | - |
| CP97_RS13585 () | 2781842..2783203 | + | 1362 | WP_048886393.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| CP97_RS13590 () | 2783200..2784765 | + | 1566 | WP_048886394.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPB | - |
| CP97_RS13595 () | 2784904..2785578 | + | 675 | WP_048886395.1 | response regulator transcription factor | - |
| CP97_RS13600 () | 2785660..2788377 | - | 2718 | WP_048887028.1 | TonB-dependent receptor | - |
| CP97_RS13605 () | 2788504..2790081 | - | 1578 | WP_048886396.1 | hypothetical protein | - |
| CP97_RS13610 () | 2790365..2790733 | + | 369 | WP_048886397.1 | tetratricopeptide repeat protein | - |
| CP97_RS13615 () | 2790896..2791540 | + | 645 | WP_048886398.1 | lytic transglycosylase domain-containing protein | - |
| CP97_RS13620 () | 2791543..2791839 | + | 297 | WP_174539170.1 | TrbC/VirB2 family protein | - |
| CP97_RS13625 () | 2791853..2792134 | + | 282 | WP_048887029.1 | VirB3 family type IV secretion system protein | - |
| CP97_RS13630 () | 2792186..2794615 | + | 2430 | WP_048886400.1 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| CP97_RS13635 () | 2794612..2795799 | + | 1188 | WP_048886401.1 | type IV secretion system protein | - |
| CP97_RS13640 () | 2795796..2796608 | + | 813 | WP_048886402.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| CP97_RS13645 () | 2796636..2797790 | + | 1155 | WP_048886403.1 | TrbI/VirB10 family protein | - |
| CP97_RS13650 () | 2797804..2798826 | + | 1023 | WP_048886404.1 | P-type DNA transfer ATPase VirB11 | - |
| CP97_RS13655 () | 2798895..2801081 | + | 2187 | WP_048886405.1 | RNA degradosome polyphosphate kinase | - |
| CP97_RS13660 () | 2801165..2802574 | + | 1410 | WP_082863926.1 | hypothetical protein | - |
| CP97_RS13665 () | 2802670..2802993 | + | 324 | WP_048886407.1 | TraR/DksA C4-type zinc finger protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|