MGE detailed information
MGE type: Prophage MGE length: 46610 bp
Accession: NZ_CP011303 Location: 2992992..3039601 Organism: Serratia liquefaciens strain HUMV-21 Replicon: chromosome
Accession: NZ_CP011303 Location: 2992992..3039601 Organism: Serratia liquefaciens strain HUMV-21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XJ20_RS25580 () | 2988629..2989038 | + | 410 | Protein_2758 | hypothetical protein | - |
| XJ20_RS13890 () | 2989035..2989394 | - | 360 | WP_046373852.1 | hypothetical protein | - |
| XJ20_RS13895 () | 2989437..2989760 | - | 324 | WP_046373853.1 | hypothetical protein | - |
| XJ20_RS13900 () | 2989773..2990093 | - | 321 | WP_046373854.1 | hypothetical protein | - |
| XJ20_RS25180 () | 2990271..2990495 | - | 225 | WP_071844558.1 | hypothetical protein | - |
| XJ20_RS13905 () | 2990715..2990963 | - | 249 | WP_020826389.1 | helix-turn-helix transcriptional regulator | - |
| XJ20_RS13910 () | 2990938..2991501 | - | 564 | WP_046373855.1 | DUF2975 domain-containing protein | - |
| XJ20_RS13915 () | 2991644..2992843 | - | 1200 | WP_020826387.1 | trans-2-enoyl-CoA reductase family protein | - |
| XJ20_RS13920 () | 2993055..2993903 | + | 849 | WP_046375052.1 | aminoglycoside phosphotransferase family protein | - |
| XJ20_RS13925 () | 2993947..2994297 | - | 351 | WP_041415315.1 | DUF4377 domain-containing protein | - |
| XJ20_RS13930 () | 2994569..2995135 | + | 567 | WP_052730616.1 | DUF4136 domain-containing protein | - |
| XJ20_RS13935 () | 2995837..2997528 | + | 1692 | WP_046373857.1 | hypothetical protein | - |
| XJ20_RS26015 () | 2997691..2997972 | + | 282 | WP_052730617.1 | IS3 family transposase ISYen3 | Transposase |
| XJ20_RS13945 () | 2998725..2999024 | - | 300 | WP_046373858.1 | hypothetical protein | - |
| XJ20_RS13950 () | 2999127..2999972 | - | 846 | WP_046373859.1 | phage repressor protein CI | - |
| XJ20_RS13955 () | 3000086..3000478 | + | 393 | WP_046373860.1 | hypothetical protein | - |
| XJ20_RS13960 () | 3000510..3001019 | + | 510 | WP_046373861.1 | phage regulatory CII family protein | - |
| XJ20_RS25590 () | 3001030..3001266 | + | 237 | WP_123905322.1 | DUF2724 domain-containing protein | - |
| XJ20_RS13965 () | 3001199..3001654 | - | 456 | WP_046373862.1 | hypothetical protein | - |
| XJ20_RS13970 () | 3001653..3001874 | + | 222 | WP_046373863.1 | hypothetical protein | - |
| XJ20_RS13975 () | 3001876..3002229 | + | 354 | WP_046373864.1 | DUF5347 domain-containing protein | - |
| XJ20_RS13980 () | 3002296..3002568 | + | 273 | WP_046373865.1 | DUF2732 family protein | - |
| XJ20_RS13985 () | 3002568..3002786 | + | 219 | WP_046373866.1 | TraR/DksA family transcriptional regulator | - |
| XJ20_RS13990 () | 3002789..3003613 | + | 825 | WP_046373867.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| XJ20_RS13995 () | 3003818..3004123 | - | 306 | WP_046373868.1 | hypothetical protein | - |
| XJ20_RS14000 () | 3004198..3006672 | + | 2475 | WP_071844560.1 | replication endonuclease | - |
| XJ20_RS14005 () | 3006876..3007061 | + | 186 | WP_046373869.1 | hypothetical protein | - |
| XJ20_RS14010 () | 3007065..3007298 | + | 234 | WP_046373870.1 | hypothetical protein | - |
| XJ20_RS14015 () | 3007457..3007660 | + | 204 | WP_046373871.1 | hypothetical protein | - |
| XJ20_RS14020 () | 3007660..3008493 | + | 834 | WP_046373872.1 | hypothetical protein | - |
| XJ20_RS14025 () | 3008937..3009980 | - | 1044 | WP_046373873.1 | phage portal protein | - |
| XJ20_RS14030 () | 3009977..3010660 | - | 684 | WP_046373874.1 | terminase family protein | - |
| XJ20_RS14035 () | 3010660..3012426 | - | 1767 | WP_046373875.1 | terminase ATPase subunit family protein | - |
| XJ20_RS14040 () | 3012570..3013403 | + | 834 | WP_046373876.1 | GPO family capsid scaffolding protein | - |
| XJ20_RS14045 () | 3013464..3014528 | + | 1065 | WP_046373877.1 | phage major capsid protein, P2 family | - |
| XJ20_RS14050 () | 3014567..3015202 | + | 636 | WP_082100051.1 | terminase endonuclease subunit | - |
| XJ20_RS14055 () | 3015301..3015765 | + | 465 | WP_046373879.1 | head completion/stabilization protein | - |
| XJ20_RS14060 () | 3015765..3015968 | + | 204 | WP_046373880.1 | tail protein X | - |
| XJ20_RS14065 () | 3015973..3016341 | + | 369 | WP_046373881.1 | hypothetical protein | - |
| XJ20_RS14070 () | 3016344..3016673 | + | 330 | WP_052730619.1 | phage holin family protein | - |
| XJ20_RS14075 () | 3016648..3017145 | + | 498 | WP_046373882.1 | glycoside hydrolase family 104 protein | - |
| XJ20_RS14080 () | 3017142..3017600 | + | 459 | WP_082100025.1 | Rz-like lysis system protein LysB | - |
| XJ20_RS14085 () | 3017708..3018139 | + | 432 | WP_046373883.1 | phage tail protein | - |
| XJ20_RS14090 () | 3018132..3018578 | + | 447 | WP_046373884.1 | phage virion morphogenesis protein | - |
| XJ20_RS14095 () | 3018723..3019316 | + | 594 | WP_046373885.1 | phage baseplate assembly protein V | - |
| XJ20_RS14100 () | 3019313..3019663 | + | 351 | WP_046373886.1 | GPW/gp25 family protein | - |
| XJ20_RS14105 () | 3019660..3020568 | + | 909 | WP_046373887.1 | baseplate assembly protein | - |
| XJ20_RS14110 () | 3020561..3021160 | + | 600 | WP_046373888.1 | phage tail protein I | - |
| XJ20_RS14115 () | 3021162..3024476 | + | 3315 | WP_046373889.1 | hypothetical protein | - |
| XJ20_RS14120 () | 3024469..3025539 | + | 1071 | WP_046373890.1 | phage tail protein | - |
| XJ20_RS14125 () | 3025735..3026910 | + | 1176 | WP_046373891.1 | phage tail sheath protein | - |
| XJ20_RS14130 () | 3026921..3027436 | + | 516 | WP_046373892.1 | phage major tail tube protein | - |
| XJ20_RS14135 () | 3027497..3027787 | + | 291 | WP_046373893.1 | phage tail assembly protein | - |
| XJ20_RS25195 () | 3027802..3027921 | + | 120 | WP_071844561.1 | GpE family phage tail protein | - |
| XJ20_RS14140 () | 3027914..3030457 | + | 2544 | WP_046373894.1 | phage tail tape measure protein | - |
| XJ20_RS14145 () | 3030454..3030918 | + | 465 | WP_046373895.1 | phage tail protein | - |
| XJ20_RS14150 () | 3030915..3032012 | + | 1098 | WP_046373896.1 | phage late control D family protein | - |
| XJ20_RS25200 () | 3032086..3032304 | + | 219 | WP_071844562.1 | ogr/Delta-like zinc finger family protein | - |
| XJ20_RS14155 () | 3032424..3033512 | + | 1089 | WP_046373897.1 | Tyrosine recombinase XerH ; Integrase | Integrase |
| - () | 3033558..3033654 | - | 97 | - | - | Toxin Detail |
| - () | 3033558..3033676 | + | 119 | - | - | Antitoxin Detail |
| XJ20_RS14160 () | 3033796..3034137 | - | 342 | WP_020826380.1 | YebY family protein | - |
| XJ20_RS14165 () | 3034207..3035088 | - | 882 | WP_046373898.1 | copper homeostasis membrane protein CopD | - |
| XJ20_RS14170 () | 3035092..3035475 | - | 384 | WP_020826378.1 | CopC domain-containing protein YobA | - |
| XJ20_RS14175 () | 3035791..3036309 | - | 519 | WP_020826377.1 | non-heme ferritin | - |
| XJ20_RS14180 () | 3036682..3036912 | + | 231 | WP_020826376.1 | DNA polymerase III subunit theta | - |
| XJ20_RS14185 () | 3036943..3037896 | - | 954 | WP_020826375.1 | prolyl aminopeptidase | - |
| XJ20_RS14190 () | 3038069..3038494 | - | 426 | WP_020826374.1 | RNA polymerase-binding protein DksA | - |
| XJ20_RS14195 () | 3038933..3039601 | + | 669 | WP_020826373.1 | exodeoxyribonuclease X | - |
| XJ20_RS14200 () | 3039636..3041669 | - | 2034 | WP_046373899.1 | prolyl oligopeptidase family serine peptidase | - |
| XJ20_RS14205 () | 3041738..3042391 | - | 654 | WP_020826371.1 | DUF533 domain-containing protein | - |
| XJ20_RS14210 () | 3042575..3043162 | - | 588 | WP_020826370.1 | molecular chaperone | - |
| XJ20_RS14215 () | 3043205..3043942 | - | 738 | WP_020826369.1 | phosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|