MGE detailed information
MGE type: Prophage MGE length: 43265 bp
Accession: NZ_CP011286 Location: 1867742..1911006 Organism: Yersinia enterocolitica strain KNG22703 Replicon: chromosome
Accession: NZ_CP011286 Location: 1867742..1911006 Organism: Yersinia enterocolitica strain KNG22703 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XM56_RS08280 () | 1863071..1863295 | - | 225 | WP_005160184.1 | DUF2594 family protein | - |
| XM56_RS08285 () | 1863989..1864645 | + | 657 | WP_054540931.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
| XM56_RS08290 () | 1864638..1866470 | + | 1833 | WP_032904707.1 | excinuclease ABC subunit UvrC | - |
| XM56_RS08295 () | 1866529..1867077 | + | 549 | WP_005160174.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| XM56_RS08315 () | 1867742..1867957 | - | 216 | WP_013649733.1 | ogr/Delta-like zinc finger family protein | - |
| XM56_RS08320 () | 1868267..1869286 | + | 1020 | WP_020282800.1 | IS110 family transposase ISYen1 | Transposase |
| XM56_RS08325 () | 1869618..1870685 | - | 1068 | WP_042663916.1 | phage late control D family protein | - |
| XM56_RS08330 () | 1870657..1873288 | - | 2632 | Protein_1628 | phage tail tape measure protein | - |
| XM56_RS08335 () | 1873281..1873400 | - | 120 | WP_004705491.1 | GpE family phage tail protein | - |
| XM56_RS08340 () | 1873415..1873693 | - | 279 | WP_080366163.1 | phage tail assembly protein | - |
| XM56_RS08345 () | 1873839..1874354 | - | 516 | WP_013649736.1 | phage major tail tube protein | - |
| XM56_RS08350 () | 1874366..1875541 | - | 1176 | WP_013649737.1 | phage tail sheath protein | - |
| XM56_RS08355 () | 1875851..1876036 | - | 186 | WP_013649738.1 | hypothetical protein | - |
| XM56_RS22105 () | 1876170..1876308 | - | 139 | Protein_1634 | ash family protein | - |
| XM56_RS08360 () | 1876600..1877484 | - | 885 | WP_072077075.1 | Recombination-promoting nuclease RpnA | VF |
| XM56_RS22540 () | 1877690..1877866 | - | 177 | WP_013649740.1 | hypothetical protein | VF |
| XM56_RS08365 () | 1878308..1878628 | - | 321 | WP_013649741.1 | hypothetical protein | - |
| XM56_RS08370 () | 1878618..1878824 | - | 207 | WP_013649742.1 | hypothetical protein | - |
| XM56_RS08375 () | 1878966..1879133 | + | 168 | WP_005161469.1 | hypothetical protein | - |
| XM56_RS08380 () | 1879205..1879465 | + | 261 | WP_005161466.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| XM56_RS08385 () | 1879472..1879750 | + | 279 | WP_013649743.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| XM56_RS21260 () | 1879803..1880415 | - | 613 | Protein_1642 | tail fiber assembly protein | - |
| XM56_RS08400 () | 1880415..1881707 | - | 1293 | WP_013649744.1 | phage tail protein | - |
| XM56_RS22545 () | 1881680..1881961 | - | 282 | WP_013649745.1 | phage tail protein | - |
| XM56_RS08410 () | 1881954..1882499 | - | 546 | WP_032904715.1 | phage tail protein I | - |
| XM56_RS08415 () | 1882492..1883400 | - | 909 | WP_013649747.1 | baseplate assembly protein | - |
| XM56_RS08420 () | 1883400..1883756 | - | 357 | WP_005161449.1 | GPW/gp25 family protein | - |
| XM56_RS08425 () | 1883753..1884388 | - | 636 | WP_013649748.1 | phage baseplate assembly protein V | - |
| XM56_RS08430 () | 1884525..1884797 | + | 273 | WP_005161438.1 | BrnT family toxin | - |
| XM56_RS08435 () | 1884778..1885068 | + | 291 | WP_005161435.1 | BrnA antitoxin family protein | - |
| XM56_RS08440 () | 1885134..1886195 | + | 1062 | WP_005161434.1 | toll/interleukin-1 receptor domain-containing protein | - |
| XM56_RS08445 () | 1886234..1886680 | - | 447 | WP_005161432.1 | phage virion morphogenesis protein | - |
| XM56_RS08450 () | 1886677..1887144 | - | 468 | WP_013649749.1 | phage tail protein | - |
| XM56_RS08455 () | 1887246..1887671 | - | 426 | WP_032904717.1 | Rz-like lysis system protein LysB | - |
| XM56_RS08460 () | 1887675..1888070 | - | 396 | WP_013649751.1 | M15 family metallopeptidase | - |
| XM56_RS08465 () | 1888057..1888236 | - | 180 | WP_013649752.1 | holin | - |
| XM56_RS21265 () | 1888221..1888532 | - | 312 | WP_071822708.1 | P2 family phage major capsid protein | - |
| XM56_RS22330 () | 1888511..1889174 | - | 664 | Protein_1658 | IS3 family transposase IS1400 | Transposase |
| XM56_RS21270 () | 1889361..1889460 | - | 100 | Protein_1659 | integrase | - |
| XM56_RS08480 () | 1889459..1890184 | - | 726 | Protein_1660 | MFS transporter | - |
| XM56_RS08485 () | 1890218..1891420 | - | 1203 | WP_005176946.1 | IS256 family transposase ISSod4 | Transposase |
| XM56_RS08490 () | 1891476..1891973 | - | 498 | Protein_1662 | MFS transporter | - |
| XM56_RS08495 () | 1892076..1892993 | + | 918 | WP_005161398.1 | LysR family transcriptional regulator | - |
| XM56_RS08500 () | 1893595..1894014 | - | 420 | WP_013649756.1 | helix-turn-helix domain-containing protein | - |
| XM56_RS08505 () | 1894415..1895059 | + | 645 | WP_005161394.1 | Chloramphenicol acetyltransferase | VF |
| XM56_RS08515 () | 1895804..1896223 | + | 420 | WP_013649757.1 | antitermination protein Q | - |
| XM56_RS08520 () | 1896400..1896576 | - | 177 | WP_005161372.1 | GhoT/OrtT family toxin | - |
| XM56_RS08525 () | 1896803..1896979 | + | 177 | WP_005161370.1 | phage holin family protein | - |
| XM56_RS08530 () | 1896981..1897463 | + | 483 | WP_032904719.1 | lysozyme | - |
| XM56_RS08535 () | 1897836..1898720 | + | 885 | WP_005161363.1 | triacylglycerol lipase | - |
| XM56_RS08540 () | 1899022..1899678 | + | 657 | WP_005161358.1 | DUF533 domain-containing protein | - |
| XM56_RS08545 () | 1899785..1900669 | - | 885 | WP_013649759.1 | LysR family transcriptional regulator AmpR | - |
| XM56_RS08550 () | 1900804..1901970 | + | 1167 | WP_013649760.1 | class C beta-lactamase | - |
| XM56_RS08555 () | 1902117..1903208 | - | 1092 | WP_013649761.1 | Ribosome-binding ATPase YchF | VF |
| XM56_RS08560 () | 1903476..1903934 | + | 459 | WP_005161346.1 | hypothetical protein | - |
| XM56_RS08565 () | 1903989..1904582 | - | 594 | WP_013649762.1 | aminoacyl-tRNA hydrolase | - |
| XM56_RS08570 () | 1904914..1905186 | + | 273 | WP_005161340.1 | stress-induced protein YchH | - |
| XM56_RS08580 () | 1905673..1906620 | - | 948 | WP_004390739.1 | ribose-phosphate diphosphokinase | - |
| XM56_RS08585 () | 1906818..1907699 | - | 882 | WP_013649763.1 | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase | - |
| XM56_RS08590 () | 1907701..1908324 | - | 624 | WP_013649764.1 | lipoprotein insertase outer membrane protein LolB | - |
| XM56_RS08595 () | 1908630..1909892 | + | 1263 | WP_013649765.1 | glutamyl-tRNA reductase | - |
| XM56_RS08600 () | 1909924..1911006 | + | 1083 | WP_005161322.1 | peptide chain release factor 1 | - |
| XM56_RS08605 () | 1911006..1911860 | + | 855 | WP_005161319.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| XM56_RS08610 () | 1911878..1912279 | + | 402 | WP_013649766.1 | SirB2 family protein | - |
| XM56_RS08615 () | 1912276..1913085 | + | 810 | WP_005161315.1 | invasion regulator SirB1 | - |
| XM56_RS08620 () | 1913230..1914084 | + | 855 | WP_005161312.1 | 3-deoxy-8-phosphooctulonate synthase | - |
| XM56_RS08625 () | 1914158..1915858 | - | 1701 | Protein_1687 | C4-dicarboxylic acid transporter DauA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|