MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 66580 bp
Accession: NZ_CP011254 Location: 542066..608645 Organism: Serratia fonticola strain DSM 4576 Replicon: chromosome
Accession: NZ_CP011254 Location: 542066..608645 Organism: Serratia fonticola strain DSM 4576 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WN53_RS02280 () | 537489..539006 | - | 1518 | WP_021806189.1 | lysine--tRNA ligase | - |
| WN53_RS02290 () | 540299..542032 | - | 1734 | WP_046807996.1 | single-stranded-DNA-specific exonuclease RecJ | - |
| WN53_RS02295 () | 542039..542752 | - | 714 | WP_021179812.1 | bifunctional protein-disulfide isomerase/oxidoreductase DsbC | - |
| WN53_RS02300 () | 542780..543679 | - | 900 | WP_021179811.1 | Tyrosine recombinase XerD | VF |
| WN53_RS02305 () | 543817..544335 | + | 519 | WP_021179810.1 | flavodoxin FldB | - |
| WN53_RS02310 () | 544420..545808 | - | 1389 | WP_024486353.1 | cell envelope integrity protein CreD | - |
| WN53_RS02315 () | 545912..547330 | - | 1419 | WP_024486354.1 | two-component system sensor histidine kinase CreC | - |
| WN53_RS02320 () | 547327..548022 | - | 696 | WP_024486355.1 | Transcriptional regulatory protein CreB | VF |
| WN53_RS02325 () | 548022..548444 | - | 423 | WP_024486356.1 | protein YgfX | Toxin Detail |
| WN53_RS02330 () | 548425..548691 | - | 267 | WP_024486357.1 | FAD assembly factor SdhE | Antitoxin Detail |
| WN53_RS02335 () | 548992..549984 | + | 993 | WP_024486358.1 | tRNA-modifying protein YgfZ | - |
| WN53_RS02340 () | 550024..550521 | - | 498 | WP_024486359.1 | DUF2165 domain-containing protein | - |
| WN53_RS02345 () | 550754..551428 | - | 675 | WP_024486360.1 | hypothetical protein | VF |
| WN53_RS02350 () | 551665..552273 | + | 609 | WP_024486361.1 | HD domain-containing protein | - |
| WN53_RS02355 () | 552724..553878 | + | 1155 | WP_080949234.1 | IS481 family transposase ISEc19 | Transposase |
| WN53_RS02360 () | 553954..554913 | - | 960 | WP_046807998.1 | IS110 family transposase ISOt5 | Transposase |
| WN53_RS02365 () | 555176..555922 | - | 747 | WP_024486991.1 | putative oxidoreductase YgfF | VF |
| WN53_RS02370 () | 555942..556907 | - | 966 | WP_024486992.1 | Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsC | VF |
| WN53_RS02375 () | 557029..559908 | - | 2880 | WP_046807999.1 | aminomethyl-transferring glycine dehydrogenase | - |
| WN53_RS02380 () | 559994..560380 | - | 387 | WP_021806203.1 | glycine cleavage system protein GcvH | - |
| WN53_RS02385 () | 560410..561507 | - | 1098 | WP_024486378.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| WN53_RS02390 () | 562095..563297 | - | 1203 | WP_024486379.1 | FAD-dependent 2-octaprenylphenol hydroxylase | - |
| WN53_RS02395 () | 563528..564706 | - | 1179 | WP_024486380.1 | 2-octaprenyl-6-methoxyphenyl hydroxylase | - |
| WN53_RS02400 () | 564708..566021 | - | 1314 | WP_021806207.1 | Xaa-Pro aminopeptidase | - |
| WN53_RS02405 () | 566112..566690 | - | 579 | WP_024486381.1 | YecA family protein | - |
| WN53_RS02410 () | 566986..567315 | + | 330 | WP_021179791.1 | cell division protein ZapA | - |
| WN53_RS02415 () | 567593..568201 | + | 609 | WP_024486382.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| WN53_RS02420 () | 568276..569514 | - | 1239 | WP_024486383.1 | phosphoglycerate dehydrogenase | - |
| WN53_RS02425 () | 569958..571310 | - | 1353 | WP_024487021.1 | group II intron reverse transcriptase/maturase | - |
| WN53_RS02430 () | 571799..572458 | - | 660 | WP_024485684.1 | ribose-5-phosphate isomerase RpiA | - |
| WN53_RS02435 () | 572674..573567 | + | 894 | WP_021179788.1 | LysR family transcriptional regulator ArgP | - |
| WN53_RS02440 () | 573605..574336 | - | 732 | WP_021806211.1 | oxidative stress defense protein | - |
| WN53_RS02445 () | 574482..575105 | - | 624 | WP_024485683.1 | arginine exporter ArgO | - |
| WN53_RS02450 () | 575230..575736 | - | 507 | WP_021806214.1 | Rrf2 family transcriptional regulator | - |
| WN53_RS02455 () | 575967..577166 | + | 1200 | WP_024485682.1 | FAD-dependent oxidoreductase | - |
| WN53_RS02460 () | 577211..578077 | - | 867 | WP_024485681.1 | small-conductance mechanosensitive channel MscS | - |
| WN53_RS02465 () | 578415..579281 | - | 867 | WP_024485680.1 | small-conductance mechanosensitive channel MscS | - |
| WN53_RS02470 () | 579530..580198 | + | 669 | WP_024485679.1 | DUF1345 domain-containing protein | - |
| WN53_RS02475 () | 580372..581451 | - | 1080 | WP_021179781.1 | class II fructose-bisphosphate aldolase | - |
| WN53_RS02480 () | 581608..582771 | - | 1164 | WP_024485678.1 | phosphoglycerate kinase | - |
| WN53_RS02485 () | 582844..583860 | - | 1017 | WP_021806218.1 | erythrose-4-phosphate dehydrogenase | - |
| WN53_RS02490 () | 584434..584721 | + | 288 | WP_021806219.1 | antibiotic biosynthesis monooxygenase | - |
| WN53_RS02495 () | 584774..585277 | - | 504 | WP_024485677.1 | Fimbria A protein | VF |
| WN53_RS02500 () | 585323..586561 | - | 1239 | WP_024485676.1 | fimbrial protein | - |
| WN53_RS02505 () | 586558..587283 | - | 726 | WP_051346347.1 | Chaperone protein PapD | VF |
| WN53_RS02510 () | 587280..589811 | - | 2532 | WP_024485674.1 | Outer membrane usher protein PapC | VF |
| WN53_RS02515 () | 589947..590504 | - | 558 | WP_024485673.1 | Major MR/P fimbria protein | VF |
| WN53_RS02520 () | 590924..591727 | + | 804 | WP_024485672.1 | winged helix family transcriptional regulator | - |
| WN53_RS02525 () | 591734..592213 | + | 480 | WP_024485671.1 | hypothetical protein | - |
| WN53_RS02530 () | 592517..593122 | + | 606 | WP_024485670.1 | hypothetical protein | VF |
| WN53_RS02535 () | 593208..594278 | - | 1071 | WP_024485669.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| WN53_RS02540 () | 594271..596040 | - | 1770 | WP_024485668.1 | iron ABC transporter permease | - |
| WN53_RS02545 () | 596436..597521 | - | 1086 | WP_024484384.1 | ABC transporter substrate-binding protein | - |
| WN53_RS02550 () | 597773..599767 | - | 1995 | WP_024484383.1 | transketolase | - |
| WN53_RS02555 () | 599994..600746 | + | 753 | WP_024484382.1 | M48 family metallopeptidase | - |
| WN53_RS02560 () | 600801..602438 | - | 1638 | WP_021179772.1 | thiamine pyrophosphate-binding protein | - |
| WN53_RS02565 () | 602613..604082 | - | 1470 | WP_024484381.1 | aldehyde dehydrogenase | - |
| WN53_RS02570 () | 604099..604893 | - | 795 | WP_024484380.1 | aspartate dehydrogenase | - |
| WN53_RS02575 () | 604907..605701 | - | 795 | WP_024484379.1 | SDR family oxidoreductase | - |
| WN53_RS02580 () | 605698..606516 | - | 819 | WP_024484378.1 | alpha/beta hydrolase | - |
| WN53_RS02585 () | 606516..607040 | - | 525 | WP_024484377.1 | cupin domain-containing protein | - |
| WN53_RS02590 () | 607061..608323 | - | 1263 | WP_024484376.1 | MFS transporter | - |
| WN53_RS02595 () | 608348..609559 | - | 1212 | WP_024484375.1 | FAD-dependent oxidoreductase | - |
| WN53_RS02600 () | 609556..610497 | - | 942 | WP_024484374.1 | VOC family protein | - |
| WN53_RS02605 () | 610636..611430 | - | 795 | WP_024484373.1 | IclR family transcriptional regulator | - |
| WN53_RS02610 () | 611467..612222 | - | 756 | WP_024484372.1 | SDR family oxidoreductase | - |
| WN53_RS02615 () | 612219..613262 | - | 1044 | WP_024484371.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| WN53_RS02620 () | 613283..613591 | - | 309 | WP_024484370.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|