MGE detailed information
MGE type: Prophage MGE length: 40754 bp
Accession: NZ_CP011254 Location: 5228387..5269140 Organism: Serratia fonticola strain DSM 4576 Replicon: chromosome
Accession: NZ_CP011254 Location: 5228387..5269140 Organism: Serratia fonticola strain DSM 4576 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WN53_RS23160 () | 5223937..5224485 | - | 549 | WP_021181074.1 | XRE family transcriptional regulator | - |
| WN53_RS23165 () | 5224599..5225267 | + | 669 | WP_024485370.1 | AzlC family ABC transporter permease | - |
| WN53_RS23170 () | 5225267..5225587 | + | 321 | WP_024485371.1 | AzlD domain-containing protein | - |
| WN53_RS23175 () | 5225652..5226635 | + | 984 | WP_152526608.1 | hypothetical protein | - |
| WN53_RS23180 () | 5226773..5227315 | - | 543 | WP_024485373.1 | hypothetical protein | - |
| WN53_RS23185 () | 5227489..5228304 | - | 816 | WP_024485374.1 | VanW family protein | - |
| WN53_RS23190 () | 5228387..5229361 | - | 975 | Protein_4608 | translesion error-prone DNA polymerase V subunit UmuC | - |
| WN53_RS23195 () | 5229798..5230820 | - | 1023 | WP_024485376.1 | IS110 family transposase ISSm1 | Transposase |
| WN53_RS23200 () | 5231095..5232318 | - | 1224 | WP_024485377.1 | hypothetical protein | - |
| WN53_RS23205 () | 5232376..5234370 | - | 1995 | WP_152526609.1 | hypothetical protein | - |
| WN53_RS27730 () | 5234591..5234887 | + | 297 | Protein_4612 | IS6 family transposase ISYps1 | Transposase |
| WN53_RS23215 () | 5234929..5237970 | - | 3042 | WP_024485380.1 | Tn3 family transposase ISPsy42 | Transposase |
| WN53_RS23220 () | 5238120..5238713 | + | 594 | WP_024485381.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| WN53_RS28745 () | 5238792..5240117 | + | 1326 | WP_158645293.1 | hypothetical protein | - |
| WN53_RS27735 () | 5240479..5240873 | + | 395 | Protein_4616 | DDE-type integrase/transposase/recombinase | - |
| WN53_RS26945 () | 5240952..5244260 | - | 3309 | WP_158645294.1 | hypothetical protein | - |
| WN53_RS23240 () | 5244646..5245230 | - | 585 | Protein_4618 | hypothetical protein | - |
| WN53_RS23245 () | 5245227..5246957 | - | 1731 | WP_024485877.1 | hypothetical protein ; Integrase | Integrase |
| WN53_RS23250 () | 5246950..5248239 | - | 1290 | WP_024485876.1 | hypothetical protein ; Integrase | Integrase |
| WN53_RS23255 () | 5248312..5248620 | - | 309 | Protein_4621 | DNA polymerase V subunit UmuC | - |
| WN53_RS23260 () | 5248620..5249042 | - | 423 | WP_024485874.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| WN53_RS23265 () | 5249264..5249761 | - | 498 | WP_046808320.1 | membrane protein | - |
| WN53_RS23270 () | 5250071..5250943 | - | 873 | WP_024485873.1 | excinuclease Cho | - |
| WN53_RS23275 () | 5251325..5252014 | - | 690 | WP_024485872.1 | DUF4145 domain-containing protein | - |
| WN53_RS23280 () | 5252262..5252645 | - | 384 | WP_024485871.1 | DUF2570 family protein | - |
| WN53_RS23285 () | 5252642..5253268 | - | 627 | WP_024485870.1 | glycoside hydrolase family 19 protein | - |
| WN53_RS26950 () | 5253273..5253683 | - | 411 | WP_052754330.1 | phage holin family protein | - |
| WN53_RS28285 () | 5253831..5254274 | + | 444 | WP_024485868.1 | hypothetical protein | - |
| WN53_RS23300 () | 5254570..5255238 | - | 669 | WP_024485867.1 | hypothetical protein | - |
| WN53_RS27750 () | 5255556..5255723 | - | 168 | WP_167669108.1 | DUF1133 family protein | - |
| - () | 5255767..5255860 | + | 94 | - | - | Antitoxin Detail |
| - () | 5255774..5255869 | - | 96 | - | - | Toxin Detail |
| WN53_RS23305 () | 5256010..5256351 | - | 342 | WP_021806756.1 | YebY family protein | - |
| WN53_RS23310 () | 5256421..5257302 | - | 882 | WP_024485866.1 | copper homeostasis membrane protein CopD | - |
| WN53_RS23315 () | 5257306..5257689 | - | 384 | WP_024485865.1 | CopC domain-containing protein YobA | - |
| WN53_RS23320 () | 5258130..5258648 | - | 519 | WP_024485864.1 | non-heme ferritin | - |
| WN53_RS23325 () | 5259038..5259268 | + | 231 | WP_024485863.1 | DNA polymerase III subunit theta | - |
| WN53_RS23330 () | 5259404..5260393 | - | 990 | WP_046808321.1 | prolyl aminopeptidase | - |
| WN53_RS23335 () | 5260506..5260943 | - | 438 | WP_021806760.1 | TraR/DksA C4-type zinc finger protein | - |
| WN53_RS23340 () | 5261365..5262033 | + | 669 | WP_024486851.1 | exodeoxyribonuclease X | - |
| WN53_RS23345 () | 5262064..5264097 | - | 2034 | WP_024486852.1 | prolyl oligopeptidase family serine peptidase | - |
| WN53_RS23350 () | 5264257..5264565 | - | 309 | WP_024486853.1 | N(4)-acetylcytidine aminohydrolase | - |
| WN53_RS23355 () | 5264605..5264931 | - | 327 | WP_024486854.1 | YebG family protein | - |
| WN53_RS23360 () | 5265017..5266399 | - | 1383 | WP_024530215.1 | ATP-dependent RNA helicase DbpA | - |
| WN53_RS23365 () | 5266611..5267789 | + | 1179 | WP_024486896.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| WN53_RS23370 () | 5267827..5268069 | - | 243 | WP_021806766.1 | YoaH family protein | - |
| WN53_RS23375 () | 5268133..5269140 | - | 1008 | WP_024486897.1 | glycosyltransferase | - |
| WN53_RS23380 () | 5269417..5270790 | + | 1374 | WP_046808322.1 | aminodeoxychorismate synthase component 1 | - |
| WN53_RS23385 () | 5270787..5271365 | + | 579 | WP_024486974.1 | CoA pyrophosphatase | - |
| WN53_RS23390 () | 5271738..5273102 | + | 1365 | WP_024486973.1 | L-serine ammonia-lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|