MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 32021 bp
Accession: NZ_CP011165 Location: 1..32021 Organism: Xanthomonas citri pv. aurantifolii strain FDC 1609 Replicon: plasmid pXfc32
Accession: NZ_CP011165 Location: 1..32021 Organism: Xanthomonas citri pv. aurantifolii strain FDC 1609 Replicon: plasmid pXfc32
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TP50_RS23710 () | 341..796 | + | 456 | WP_007966866.1 | hypothetical protein | - |
| TP50_RS23715 () | 793..1500 | + | 708 | WP_088409654.1 | plasmid stabilization protein | - |
| TP50_RS23720 () | 1546..1899 | + | 354 | WP_042675957.1 | hypothetical protein | - |
| TP50_RS24565 () | 2051..2368 | - | 318 | WP_011153922.1 | IS3 family transposase ISMex33 | Transposase |
| TP50_RS23725 () | 2536..2966 | + | 431 | Protein_4 | DUF3757 domain-containing protein | - |
| TP50_RS23735 () | 3149..4111 | - | 963 | WP_007974124.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| TP50_RS23740 () | 4270..4956 | - | 687 | WP_007974125.1 | DNA-binding protein | - |
| TP50_RS23745 () | 5070..5318 | + | 249 | WP_042806123.1 | Tn3 family transposase ISPsy42 | Transposase |
| TP50_RS23750 () | 5428..6054 | + | 627 | WP_007974205.1 | Chromosome-partitioning ATPase Soj | VF |
| TP50_RS23755 () | 6051..6377 | + | 327 | WP_007974207.1 | hypothetical protein | - |
| TP50_RS23760 () | 6625..6840 | + | 216 | WP_011345582.1 | antitoxin MazE family protein | Antitoxin Detail |
| TP50_RS23765 () | 6840..7160 | + | 321 | WP_007974210.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| TP50_RS23770 () | 7829..8647 | - | 819 | WP_088409655.1 | hypothetical protein | - |
| TP50_RS23775 () | 9225..9617 | - | 393 | WP_088409656.1 | hypothetical protein | - |
| TP50_RS23780 () | 9929..10219 | + | 291 | WP_017158353.1 | hypothetical protein | - |
| TP50_RS23785 () | 10247..10618 | + | 372 | WP_007974938.1 | TrbC/VirB2 family protein | - |
| TP50_RS23790 () | 10615..10914 | + | 300 | WP_007968751.1 | VirB3 family type IV secretion system protein | - |
| TP50_RS23795 () | 10937..13577 | + | 2641 | Protein_17 | Type IV secretion system protein PtlC | VF |
| TP50_RS23800 () | 13574..14242 | + | 669 | WP_042806239.1 | hypothetical protein | - |
| TP50_RS23805 () | 14289..14507 | + | 219 | WP_017160238.1 | hypothetical protein | - |
| TP50_RS23810 () | 14500..14880 | + | 381 | WP_007974932.1 | hypothetical protein | - |
| TP50_RS23815 () | 14882..15748 | + | 867 | WP_007974930.1 | type IV secretion system protein | - |
| TP50_RS23820 () | 15745..16419 | + | 675 | WP_007968762.1 | type IV secretion system protein | - |
| TP50_RS23825 () | 16444..17226 | + | 783 | WP_088409657.1 | Type IV secretion system protein virB9 | VF |
| TP50_RS23830 () | 17228..18450 | + | 1223 | Protein_24 | TrbI/VirB10 family protein | - |
| TP50_RS23835 () | 18461..19486 | + | 1026 | Protein_25 | Type IV secretion system protein VirB11 | VF |
| TP50_RS23840 () | 19497..20384 | + | 888 | WP_042806238.1 | Type IV secretion system protein virB1 | VF |
| TP50_RS23845 () | 20430..20777 | + | 348 | Protein_27 | hypothetical protein | - |
| TP50_RS23850 () | 20844..21931 | + | 1088 | WP_088370746.1 | IS3 family transposase ISXac2 | Transposase |
| TP50_RS23855 () | 22013..22216 | + | 204 | WP_088409658.1 | hypothetical protein | - |
| TP50_RS23860 () | 22259..22834 | + | 576 | WP_042806236.1 | Phospholipase D | VF |
| TP50_RS23865 () | 22890..23249 | + | 360 | Protein_31 | hypothetical protein | - |
| TP50_RS23870 () | 23429..24451 | - | 1023 | WP_007974920.1 | ParA family protein | - |
| TP50_RS24570 () | 24605..24781 | - | 177 | WP_157835088.1 | hypothetical protein | - |
| TP50_RS23875 () | 24812..27787 | - | 2976 | WP_088409659.1 | Multifunctional conjugation protein TraI | Relaxase |
| TP50_RS23880 () | 27801..29375 | - | 1575 | WP_007974817.1 | type IV secretion system DNA-binding domain-containing protein | - |
| TP50_RS23885 () | 29379..29576 | - | 198 | WP_017158766.1 | hypothetical protein | - |
| TP50_RS23890 () | 29648..29989 | - | 342 | WP_017158765.1 | hypothetical protein | - |
| TP50_RS23895 () | 30188..30808 | - | 621 | WP_007974812.1 | hypothetical protein | - |
| TP50_RS23900 () | 30921..31214 | - | 294 | WP_017158795.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| TP50_RS23905 () | 31211..31480 | - | 270 | WP_017158796.1 | hypothetical protein | - |
| TP50_RS23910 () | 31578..31973 | - | 396 | WP_088409660.1 | conjugal transfer protein TraA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|