MGE detailed information
MGE type: Conjugative plasmid MGE length: 70533 bp
Accession: NZ_CP011135 Location: 1..70533 Organism: Escherichia coli VR50 Replicon: plasmid pVR50A
Accession: NZ_CP011135 Location: 1..70533 Organism: Escherichia coli VR50 Replicon: plasmid pVR50A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECVR50_RS25030 () | 375..2636 | - | 2262 | WP_046072940.1 | type IV conjugative transfer system coupling protein TraD | - |
| ECVR50_RS25035 () | 2687..3424 | - | 738 | WP_000199905.1 | hypothetical protein | - |
| ECVR50_RS25040 () | 3627..4358 | - | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| ECVR50_RS25045 () | 4407..4892 | - | 486 | WP_000605870.1 | hypothetical protein | - |
| ECVR50_RS25050 () | 4908..7730 | - | 2823 | WP_001007039.1 | conjugal transfer mating pair stabilization protein TraG | - |
| ECVR50_RS25055 () | 7727..9100 | - | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| ECVR50_RS25060 () | 9087..9512 | - | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| ECVR50_RS25065 () | 9460..9807 | - | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| ECVR50_RS25070 () | 9737..10282 | - | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| ECVR50_RS25075 () | 10269..10553 | - | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| ECVR50_RS25080 () | 10672..11016 | - | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| ECVR50_RS25085 () | 11030..11773 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| ECVR50_RS25090 () | 11766..12023 | - | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| ECVR50_RS25095 () | 12050..13900 | - | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| ECVR50_RS25100 () | 13897..14535 | - | 639 | WP_046072941.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| ECVR50_RS25105 () | 14544..14849 | - | 306 | WP_000224416.1 | hypothetical protein | - |
| ECVR50_RS25110 () | 14879..15871 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| ECVR50_RS25115 () | 15868..16500 | - | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| ECVR50_RS25120 () | 16497..16883 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| ECVR50_RS25125 () | 16880..19510 | - | 2631 | WP_000069777.1 | type IV secretion system protein TraC | - |
| ECVR50_RS30020 () | 19636..19983 | - | 348 | WP_000836682.1 | hypothetical protein | - |
| ECVR50_RS25135 () | 20011..20229 | - | 219 | WP_000556745.1 | hypothetical protein | - |
| ECVR50_RS25140 () | 20309..20782 | - | 474 | WP_000549568.1 | hypothetical protein | - |
| ECVR50_RS25145 () | 20775..21188 | - | 414 | WP_000549589.1 | hypothetical protein | - |
| ECVR50_RS28240 () | 21181..21402 | - | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| ECVR50_RS25155 () | 21537..22052 | - | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| ECVR50_RS25160 () | 22049..22417 | - | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| ECVR50_RS25165 () | 22356..22943 | - | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| ECVR50_RS25170 () | 22912..24363 | - | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| ECVR50_RS25175 () | 24363..25091 | - | 729 | WP_046072942.1 | type-F conjugative transfer system secretin TraK | - |
| ECVR50_RS25180 () | 25078..25644 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| ECVR50_RS25185 () | 25666..25977 | - | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| ECVR50_RS25190 () | 25992..26351 | - | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| ECVR50_RS25195 () | 26384..26611 | - | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| ECVR50_RS25200 () | 26748..27419 | - | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| ECVR50_RS25205 () | 27613..27996 | - | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| ECVR50_RS25210 () | 28319..28921 | + | 603 | WP_072205450.1 | hypothetical protein | VF |
| ECVR50_RS25215 () | 29218..30039 | - | 822 | WP_001234441.1 | DUF945 domain-containing protein | - |
| ECVR50_RS25220 () | 30149..30445 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| ECVR50_RS29080 () | 30913..31149 | - | 237 | WP_071594222.1 | hypothetical protein | - |
| ECVR50_RS25230 () | 31415..31657 | - | 243 | WP_000540588.1 | hypothetical protein | - |
| ECVR50_RS25235 () | 31716..32039 | - | 324 | WP_000533253.1 | hypothetical protein | - |
| ECVR50_RS30390 () | 32335..32590 | + | 256 | Protein_43 | hypothetical protein | - |
| ECVR50_RS30430 () | 32510..32791 | - | 282 | WP_001465039.1 | hypothetical protein | - |
| ECVR50_RS25255 () | 32884..33045 | - | 162 | WP_001696677.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 33111..33245 | - | 135 | NuclAT_0 | - | - |
| - () | 33111..33245 | - | 135 | NuclAT_0 | - | - |
| - () | 33111..33245 | - | 135 | NuclAT_0 | - | - |
| - () | 33111..33245 | - | 135 | NuclAT_0 | - | - |
| ECVR50_RS25265 () | 33221..33739 | - | 519 | WP_001696679.1 | hypothetical protein | - |
| ECVR50_RS25270 () | 33739..34458 | - | 720 | WP_001387922.1 | plasmid SOS inhibition protein A | - |
| ECVR50_RS25275 () | 34455..34889 | - | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| ECVR50_RS25280 () | 34944..36902 | - | 1959 | WP_001696680.1 | ParB/RepB/Spo0J family partition protein | - |
| ECVR50_RS25285 () | 36966..37199 | - | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| ECVR50_RS25290 () | 37255..37782 | - | 528 | WP_000290816.1 | single-stranded DNA-binding protein | - |
| ECVR50_RS29090 () | 38255..38521 | - | 267 | WP_071828223.1 | hypothetical protein | - |
| ECVR50_RS25300 () | 38673..39236 | - | 564 | WP_001462138.1 | class I SAM-dependent methyltransferase | - |
| ECVR50_RS25305 () | 39283..40644 | - | 1362 | WP_001386125.1 | DUF3560 domain-containing protein | - |
| ECVR50_RS25310 () | 40696..40926 | - | 231 | WP_000155844.1 | hypothetical protein | - |
| ECVR50_RS30165 () | 41441..41689 | + | 249 | WP_071587243.1 | hypothetical protein | - |
| ECVR50_RS25315 () | 41968..42159 | - | 192 | WP_001027511.1 | hypothetical protein | - |
| ECVR50_RS25320 () | 42156..42578 | - | 423 | WP_000271739.1 | DUF1380 family protein | - |
| ECVR50_RS25325 () | 42625..42927 | - | 303 | WP_072115680.1 | antirestriction protein | - |
| ECVR50_RS30395 () | 43463..44233 | - | 771 | WP_001006239.1 | hypothetical protein | - |
| ECVR50_RS25335 () | 44278..44712 | - | 435 | WP_000274496.1 | DUF1380 family protein | - |
| ECVR50_RS25340 () | 44726..44947 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| ECVR50_RS25345 () | 44948..45631 | - | 684 | WP_000086115.1 | DNA methylase | - |
| ECVR50_RS29100 () | 45708..46019 | - | 312 | WP_032179742.1 | hypothetical protein | - |
| ECVR50_RS25355 () | 46016..46918 | - | 903 | WP_001386431.1 | DUF1281 domain-containing protein | - |
| ECVR50_RS25360 () | 47342..47764 | - | 423 | WP_000774834.1 | plasmid partitioning/stability family protein | - |
| ECVR50_RS25365 () | 47767..48747 | - | 981 | WP_001218107.1 | plasmid segregation protein ParM | - |
| ECVR50_RS25370 () | 49085..49420 | + | 336 | WP_001340323.1 | hypothetical protein | - |
| ECVR50_RS25375 () | 49512..50216 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| ECVR50_RS25380 () | 50328..51143 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| ECVR50_RS25385 () | 51480..51683 | + | 204 | WP_000131876.1 | hypothetical protein | - |
| ECVR50_RS25390 () | 51674..51895 | + | 222 | WP_001251694.1 | hypothetical protein | - |
| ECVR50_RS25395 () | 52130..52459 | - | 330 | WP_001415369.1 | hypothetical protein | - |
| ECVR50_RS25400 () | 52646..53491 | - | 846 | WP_046072943.1 | Beta-lactamase TEM | ARG |
| ECVR50_RS25405 () | 53527..54231 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| ECVR50_RS25410 () | 54304..55107 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| ECVR50_RS25415 () | 55107..55943 | + | 837 | WP_000480972.1 | hypothetical protein | ARG |
| ECVR50_RS25420 () | 56050..56454 | - | 405 | Protein_78 | IS91 family transposase ISPps1 | Transposase |
| ECVR50_RS25425 () | 56566..56946 | - | 381 | WP_001696636.1 | HTH domain-containing protein | - |
| ECVR50_RS25430 () | 57388..58311 | - | 924 | WP_001415483.1 | hypothetical protein | - |
| ECVR50_RS29645 () | 58359..58523 | - | 165 | WP_001388374.1 | hypothetical protein | Toxin Detail |
| ECVR50_RS25435 () | 58520..58789 | - | 270 | WP_000079939.1 | hypothetical protein | Antitoxin Detail |
| ECVR50_RS25440 () | 59705..60562 | - | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| ECVR50_RS25445 () | 60555..60629 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| ECVR50_RS25450 () | 60867..61121 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| ECVR50_RS25455 () | 61361..61951 | - | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| ECVR50_RS25460 () | 61989..62198 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| ECVR50_RS25465 () | 62244..62705 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| ECVR50_RS25470 () | 62950..63162 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| ECVR50_RS25475 () | 63291..63851 | - | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| ECVR50_RS25480 () | 63954..64814 | - | 861 | WP_000704523.1 | putative protein YcjY | VF |
| ECVR50_RS25485 () | 64873..65619 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| ECVR50_RS30400 () | 65639..70510 | - | 4872 | WP_193376832.1 | Multifunctional conjugation protein TraI | Relaxase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|