MGE detailed information
MGE type: Genomic_island MGE length: 37081 bp
Accession: NZ_CP011134 Location: 4904022..4941102 Organism: Escherichia coli VR50 Replicon: chromosome
Accession: NZ_CP011134 Location: 4904022..4941102 Organism: Escherichia coli VR50 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECVR50_RS24445 () | 4899501..4900004 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| ECVR50_RS24450 () | 4900017..4900547 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| ECVR50_RS24455 () | 4900557..4903193 | - | 2637 | WP_000121003.1 | fimbrial usher FimD | - |
| ECVR50_RS24460 () | 4903260..4903985 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| ECVR50_RS24465 () | 4904022..4904561 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| ECVR50_RS24470 () | 4904626..4905174 | - | 549 | WP_000695564.1 | hypothetical protein | VF |
| ECVR50_RS24480 () | 4905657..4906253 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| ECVR50_RS24485 () | 4906731..4907333 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| ECVR50_RS24500 () | 4908789..4909505 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| ECVR50_RS24505 () | 4909525..4910631 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| ECVR50_RS24510 () | 4910696..4911676 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| ECVR50_RS24515 () | 4912259..4913499 | - | 1241 | Protein_4594 | helicase YjhR | - |
| ECVR50_RS29575 () | 4913615..4913860 | + | 246 | Protein_4595 | GNAT family N-acetyltransferase | - |
| ECVR50_RS24530 () | 4914237..4914494 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| ECVR50_RS24535 () | 4914506..4915051 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| ECVR50_RS24540 () | 4915107..4915853 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| ECVR50_RS29065 () | 4916022..4916240 | + | 219 | Protein_4599 | hypothetical protein | - |
| ECVR50_RS30375 () | 4916278..4916394 | + | 117 | Protein_4600 | VOC family protein | - |
| ECVR50_RS24545 () | 4916639..4917760 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| ECVR50_RS24550 () | 4917757..4918035 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| ECVR50_RS24555 () | 4918047..4919360 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| ECVR50_RS24560 () | 4919373..4920179 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| ECVR50_RS24565 () | 4920310..4920741 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| ECVR50_RS24570 () | 4920753..4921385 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| ECVR50_RS24575 () | 4921402..4922184 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| ECVR50_RS24580 () | 4922487..4923275 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| ECVR50_RS24585 () | 4923280..4924185 | + | 906 | WP_001335841.1 | dihydrodipicolinate synthase family protein | - |
| ECVR50_RS24590 () | 4924196..4926163 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| ECVR50_RS24595 () | 4926270..4927619 | + | 1350 | WP_001128363.1 | GntP family permease | - |
| ECVR50_RS24605 () | 4927966..4928952 | + | 987 | WP_000373366.1 | sugar-binding transcriptional regulator | - |
| ECVR50_RS24610 () | 4928993..4929859 | - | 867 | WP_071587474.1 | multidrug DMT transporter permease | - |
| ECVR50_RS24615 () | 4930100..4930741 | - | 642 | WP_000439687.1 | L-fuculose-phosphate aldolase | - |
| ECVR50_RS24620 () | 4930772..4931887 | - | 1116 | WP_001022014.1 | S-methyl-5-thioribose-1-phosphate isomerase | - |
| ECVR50_RS24635 () | 4933301..4936465 | + | 3165 | Protein_4617 | DUF1998 domain-containing protein | - |
| ECVR50_RS24640 () | 4936522..4937568 | - | 1047 | WP_001318550.1 | 5-methylcytosine-specific restriction endonuclease system specificity protein McrC | - |
| ECVR50_RS24645 () | 4937568..4938947 | - | 1380 | WP_000443948.1 | 5-methylcytosine-specific restriction endonuclease subunit McrB | - |
| ECVR50_RS24650 () | 4939109..4939450 | - | 342 | WP_000131234.1 | endoribonuclease SymE | - |
| ECVR50_RS24655 () | 4939678..4941102 | - | 1425 | WP_000009567.1 | type-1 restriction enzyme EcoBI specificity protein | - |
| ECVR50_RS24660 () | 4941099..4942688 | - | 1590 | WP_001063206.1 | type I restriction-modification system methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|