MGE detailed information
MGE type: IScluster/Tn MGE length: 35570 bp
Accession: NZ_CP011117 Location: 4320..39889 Organism: Pseudomonas synxantha strain LBUM223 Replicon: chromosome
Accession: NZ_CP011117 Location: 4320..39889 Organism: Pseudomonas synxantha strain LBUM223 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VO64_RS00015 () | 5463..5985 | - | 523 | Protein_2 | recombinase family protein | - |
| VO64_RS00020 () | 6186..6437 | + | 252 | WP_046067894.1 | antitoxin | - |
| VO64_RS00025 () | 6479..6751 | + | 273 | WP_046067895.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| VO64_RS00030 () | 6815..7865 | - | 1051 | Protein_5 | IS256 family transposase | - |
| VO64_RS31065 () | 7967..8890 | - | 924 | WP_148666874.1 | hypothetical protein | - |
| VO64_RS00040 () | 9203..9559 | + | 357 | WP_080944772.1 | IS66 family transposase ISPsy34 | Transposase |
| VO64_RS00045 () | 9577..11088 | + | 1512 | WP_046067897.1 | IS66 family transposase ISPpu15 | Transposase |
| VO64_RS00050 () | 11396..12988 | + | 1593 | WP_046067898.1 | group II intron reverse transcriptase/maturase | - |
| VO64_RS00055 () | 13047..13679 | + | 633 | Protein_10 | IS256 family transposase ISPa73 | Transposase |
| VO64_RS00065 () | 13748..14119 | + | 372 | WP_080944597.1 | IS66 family insertion sequence hypothetical protein | - |
| VO64_RS31380 () | 14116..14256 | + | 141 | Protein_12 | IS66 family transposase ISPpu19 | Transposase |
| VO64_RS00075 () | 14513..16078 | + | 1566 | WP_046067900.1 | IS66 family transposase ISPpu19 | Transposase |
| VO64_RS00080 () | 16106..16516 | - | 411 | WP_080944598.1 | NUDIX domain-containing protein | - |
| VO64_RS00085 () | 16824..17117 | - | 294 | WP_052721919.1 | hypothetical protein | - |
| VO64_RS00090 () | 17212..18299 | + | 1088 | WP_108240658.1 | IS3 family transposase ISAs22 | Transposase |
| VO64_RS00095 () | 18339..18524 | + | 186 | Protein_17 | transposase domain-containing protein | - |
| VO64_RS00100 () | 18818..19726 | - | 909 | WP_046067904.1 | hypothetical protein | - |
| VO64_RS00105 () | 19930..20910 | - | 981 | Protein_19 | IS5 family transposase ISPsy2 | Transposase |
| VO64_RS00110 () | 20998..21401 | - | 404 | Protein_20 | IS3 family transposase ISPsy29 | Transposase |
| VO64_RS00120 () | 22603..22947 | - | 345 | WP_046067907.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VO64_RS00125 () | 22961..23209 | - | 249 | WP_046067908.1 | prevent-host-death protein | Antitoxin Detail |
| VO64_RS00130 () | 23451..24554 | - | 1104 | WP_046067909.1 | IS5 family transposase ISPsy19 | Transposase |
| VO64_RS00135 () | 24682..25659 | + | 978 | WP_046072428.1 | IS5 family transposase ISPsy2 | Transposase |
| VO64_RS00140 () | 26069..26296 | - | 228 | WP_046072429.1 | hypothetical protein | - |
| VO64_RS00145 () | 26510..26731 | - | 222 | WP_046072430.1 | hypothetical protein | - |
| VO64_RS00150 () | 26847..27761 | - | 915 | WP_046067910.1 | DMT family transporter | - |
| VO64_RS00155 () | 28576..29445 | + | 870 | Protein_29 | IS5 family transposase ISPpu21 | Transposase |
| VO64_RS00160 () | 29476..30987 | - | 1512 | WP_046067911.1 | IS66 family transposase IS684 | Transposase |
| VO64_RS00165 () | 31005..31361 | - | 357 | WP_080944773.1 | IS66 family transposase ISPsy34 | Transposase |
| VO64_RS00170 () | 31448..32023 | + | 576 | Protein_32 | IS5 family transposase ISPsy19 | Transposase |
| VO64_RS00175 () | 32298..33251 | + | 954 | WP_108240660.1 | DUF3626 domain-containing protein | - |
| VO64_RS00180 () | 33309..33569 | + | 261 | Protein_34 | IS5/IS1182 family transposase | - |
| VO64_RS00185 () | 33651..34007 | + | 357 | WP_080944773.1 | IS66 family transposase ISPsy34 | Transposase |
| VO64_RS00190 () | 34025..35536 | + | 1512 | WP_046067913.1 | IS66 family transposase ISPpu15 | Transposase |
| VO64_RS00195 () | 35844..37436 | + | 1593 | WP_046067898.1 | group II intron reverse transcriptase/maturase | - |
| VO64_RS00205 () | 38264..38887 | - | 624 | WP_158528905.1 | transposase | - |
| VO64_RS00210 () | 38909..39889 | + | 981 | WP_046072435.1 | IS5 family transposase ISPsy2 | Transposase |
| VO64_RS00215 () | 40227..41567 | + | 1341 | WP_108240661.1 | hypothetical protein | - |
| VO64_RS31385 () | 41628..42056 | + | 429 | WP_080944600.1 | IS5 family transposase | - |
| VO64_RS00225 () | 41988..43580 | - | 1593 | WP_046067898.1 | group II intron reverse transcriptase/maturase | - |
| VO64_RS00230 () | 43888..44133 | - | 246 | Protein_43 | transposase domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|