MGE detailed information
MGE type: Prophage MGE length: 49142 bp
Accession: NZ_CP011110 Location: 624836..673977 Organism: Pseudomonas chlororaphis strain PCL1606 Replicon: chromosome
Accession: NZ_CP011110 Location: 624836..673977 Organism: Pseudomonas chlororaphis strain PCL1606 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCL1606_RS02850 () | 622147..622785 | - | 639 | WP_080926027.1 | lipopolysaccharide biosynthesis protein | - |
| PCL1606_RS02855 () | 623392..623637 | - | 246 | WP_045881016.1 | hypothetical protein | - |
| PCL1606_RS30055 () | 624220..624462 | + | 243 | WP_080925908.1 | hypothetical protein | - |
| PCL1606_RS02870 () | 624836..625261 | - | 426 | WP_045881020.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PCL1606_RS02875 () | 625294..625476 | - | 183 | WP_045886686.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PCL1606_RS02880 () | 625701..626333 | + | 633 | WP_171820025.1 | hypothetical protein | - |
| PCL1606_RS02885 () | 626330..627301 | - | 972 | WP_045881022.1 | hypothetical protein | - |
| PCL1606_RS02890 () | 627274..627978 | - | 705 | WP_045881023.1 | hypothetical protein | - |
| PCL1606_RS02895 () | 627975..628520 | - | 546 | WP_045881024.1 | hypothetical protein | - |
| PCL1606_RS02900 () | 628517..629440 | - | 924 | WP_045886688.1 | hypothetical protein | - |
| PCL1606_RS02905 () | 629437..630144 | - | 708 | WP_045881025.1 | hypothetical protein | - |
| PCL1606_RS02910 () | 630154..632352 | - | 2199 | WP_045881026.1 | phage tail protein | - |
| PCL1606_RS02915 () | 632362..632886 | - | 525 | WP_045881027.1 | phage tail protein | - |
| PCL1606_RS02920 () | 632883..634055 | - | 1173 | WP_045881028.1 | baseplate J/gp47 family protein | - |
| PCL1606_RS02925 () | 634052..634369 | - | 318 | WP_045881029.1 | DUF2590 family protein | - |
| PCL1606_RS02930 () | 634369..636567 | - | 2199 | WP_045881030.1 | phage tail tape measure protein | - |
| PCL1606_RS02935 () | 636740..637027 | - | 288 | WP_045881031.1 | phage protein | - |
| PCL1606_RS02940 () | 637065..637574 | - | 510 | WP_045881032.1 | lysis system i-spanin subunit Rz | - |
| PCL1606_RS02945 () | 637571..638104 | - | 534 | WP_045881033.1 | lysozyme | - |
| PCL1606_RS02950 () | 638101..638355 | - | 255 | WP_041984753.1 | hypothetical protein | - |
| PCL1606_RS30060 () | 638451..638663 | - | 213 | WP_045881034.1 | TraR/DksA C4-type zinc finger protein | - |
| PCL1606_RS02960 () | 638663..639112 | - | 450 | WP_045881035.1 | DUF2597 family protein | - |
| PCL1606_RS02965 () | 639117..640232 | - | 1116 | WP_045881036.1 | DUF2586 family protein | - |
| PCL1606_RS02970 () | 640247..640927 | - | 681 | WP_045881037.1 | phage virion morphogenesis protein | - |
| PCL1606_RS02975 () | 640917..641372 | - | 456 | WP_045881038.1 | phage tail protein | - |
| PCL1606_RS02980 () | 641369..641830 | - | 462 | WP_045881039.1 | head completion/stabilization protein | - |
| PCL1606_RS02985 () | 641930..642649 | - | 720 | WP_045881040.1 | terminase | - |
| PCL1606_RS02990 () | 642646..643668 | - | 1023 | WP_045881041.1 | phage major capsid protein, P2 family | - |
| PCL1606_RS02995 () | 643670..644593 | - | 924 | WP_045881042.1 | GPO family capsid scaffolding protein | - |
| PCL1606_RS03000 () | 644757..646808 | + | 2052 | WP_045881043.1 | terminase family protein | - |
| PCL1606_RS03005 () | 646720..647586 | + | 867 | WP_045886690.1 | phage portal protein | - |
| PCL1606_RS30065 () | 647667..647927 | + | 261 | WP_080925909.1 | ogr/Delta-like zinc finger family protein | - |
| PCL1606_RS30745 () | 647900..648115 | - | 216 | WP_045881044.1 | hypothetical protein | - |
| PCL1606_RS03015 () | 648638..648886 | - | 249 | WP_045881045.1 | hypothetical protein | - |
| PCL1606_RS03020 () | 648880..649119 | - | 240 | WP_045881046.1 | Arc family DNA-binding protein | - |
| PCL1606_RS03025 () | 649112..649405 | - | 294 | WP_045881047.1 | hypothetical protein | - |
| PCL1606_RS03030 () | 649468..649719 | - | 252 | WP_045881048.1 | hypothetical protein | - |
| PCL1606_RS03035 () | 649730..650023 | - | 294 | WP_045881049.1 | hypothetical protein | - |
| PCL1606_RS03040 () | 650507..653167 | - | 2661 | WP_045881050.1 | toprim domain-containing protein | - |
| PCL1606_RS03045 () | 653177..653413 | - | 237 | WP_045881051.1 | hypothetical protein | - |
| PCL1606_RS03050 () | 653506..653742 | + | 237 | WP_038582864.1 | helix-turn-helix transcriptional regulator | - |
| PCL1606_RS03055 () | 653745..654809 | + | 1065 | WP_045881052.1 | IS91 family transposase ISTha3 | Transposase |
| PCL1606_RS03065 () | 654950..658693 | - | 3744 | WP_045881053.1 | Regulatory protein RecX | VF |
| PCL1606_RS03070 () | 658814..660661 | - | 1848 | WP_044465382.1 | RNA polymerase sigma factor RpoD | - |
| PCL1606_RS03075 () | 660729..662693 | - | 1965 | WP_045881054.1 | DNA primase | - |
| PCL1606_RS30070 () | 663159..663374 | - | 216 | WP_002551877.1 | 30S ribosomal protein S21 | - |
| PCL1606_RS03085 () | 663575..664600 | + | 1026 | WP_044465380.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| PCL1606_RS03090 () | 664640..665209 | - | 570 | WP_044465379.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| PCL1606_RS03095 () | 665284..665637 | + | 354 | WP_045881055.1 | dihydroneopterin aldolase | - |
| PCL1606_RS03100 () | 665628..666146 | + | 519 | WP_044465377.1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | - |
| PCL1606_RS03105 () | 666210..667439 | - | 1230 | WP_045881056.1 | multifunctional CCA addition/repair protein | - |
| PCL1606_RS03110 () | 667505..669067 | - | 1563 | WP_044465375.1 | SpoVR family protein | - |
| PCL1606_RS03115 () | 669064..670335 | - | 1272 | WP_044465374.1 | YeaH/YhbH family protein | - |
| PCL1606_RS03120 () | 670515..672437 | - | 1923 | WP_025807357.1 | PrkA family serine protein kinase | - |
| PCL1606_RS03125 () | 672734..673063 | - | 330 | WP_045881057.1 | thiosulfate sulfurtransferase GlpE | - |
| PCL1606_RS03130 () | 673096..673977 | - | 882 | WP_045881058.1 | symmetrical bis(5'-nucleosyl)-tetraphosphatase | - |
| PCL1606_RS03135 () | 673977..674357 | - | 381 | WP_044465371.1 | Co2+/Mg2+ efflux protein ApaG | - |
| PCL1606_RS03140 () | 674481..675299 | - | 819 | WP_044465370.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| PCL1606_RS03145 () | 675296..676285 | - | 990 | WP_044465369.1 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | - |
| PCL1606_RS03150 () | 676282..677598 | - | 1317 | WP_148558613.1 | peptidylprolyl isomerase SurA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|