MGE detailed information
MGE type: Prophage MGE length: 34436 bp
Accession: NZ_CP011078 Location: 615417..649852 Organism: Yersinia ruckeri strain Big Creek 74 Replicon: chromosome
Accession: NZ_CP011078 Location: 615417..649852 Organism: Yersinia ruckeri strain Big Creek 74 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| UGYR_RS02730 () | 611612..612241 | + | 630 | WP_004721714.1 | hypothetical protein | - |
| UGYR_RS02735 () | 612448..613134 | + | 687 | WP_038242734.1 | hypothetical protein | - |
| UGYR_RS02740 () | 613875..615020 | + | 1146 | WP_004721718.1 | YRC family class C beta-lactamase | - |
| UGYR_RS02745 () | 615139..615746 | + | 608 | Protein_540 | hypothetical protein ; Integrase | Integrase |
| UGYR_RS02750 () | 616052..616531 | - | 480 | WP_045844114.1 | hypothetical protein | - |
| UGYR_RS02755 () | 616562..617416 | - | 855 | WP_045844115.1 | phage repressor protein | - |
| UGYR_RS02760 () | 617532..617933 | + | 402 | WP_052690310.1 | hypothetical protein | - |
| UGYR_RS02765 () | 617966..618484 | + | 519 | WP_045844116.1 | phage regulatory CII family protein | - |
| UGYR_RS17595 () | 618495..618668 | + | 174 | WP_167335302.1 | hypothetical protein | - |
| UGYR_RS02770 () | 618665..619174 | + | 510 | WP_045844117.1 | replication protein B | - |
| UGYR_RS02775 () | 619316..619582 | + | 267 | WP_045844118.1 | DUF2732 family protein | - |
| UGYR_RS02780 () | 619621..619878 | + | 258 | Protein_548 | DUF5405 family protein | - |
| UGYR_RS02785 () | 620040..622343 | + | 2304 | WP_045844119.1 | replication endonuclease | - |
| UGYR_RS02790 () | 622336..622686 | + | 351 | WP_045844120.1 | hypothetical protein | - |
| UGYR_RS02795 () | 622835..623029 | + | 195 | WP_038276572.1 | hypothetical protein | - |
| UGYR_RS02800 () | 623435..624472 | - | 1038 | WP_038276574.1 | phage portal protein | - |
| UGYR_RS02805 () | 624472..626235 | - | 1764 | WP_045844121.1 | terminase ATPase subunit family protein | - |
| UGYR_RS02810 () | 626390..627244 | + | 855 | WP_038276578.1 | GPO family capsid scaffolding protein | - |
| UGYR_RS02815 () | 627307..628509 | + | 1203 | WP_038276580.1 | phage major capsid protein, P2 family | - |
| UGYR_RS02820 () | 628513..629166 | + | 654 | WP_045844122.1 | M | - |
| UGYR_RS02825 () | 629258..629731 | + | 474 | WP_045844561.1 | head completion/stabilization protein | - |
| UGYR_RS02830 () | 629731..629934 | + | 204 | WP_038276584.1 | tail protein X | - |
| UGYR_RS02835 () | 629937..630146 | + | 210 | WP_038276586.1 | hypothetical protein | - |
| UGYR_RS02840 () | 630130..630636 | + | 507 | WP_038276588.1 | lysozyme | - |
| UGYR_RS02845 () | 630638..631054 | + | 417 | WP_038276590.1 | Rz-like lysis system protein LysB | - |
| UGYR_RS02855 () | 631150..631614 | + | 465 | WP_045844123.1 | phage tail protein | - |
| UGYR_RS02860 () | 631611..632060 | + | 450 | WP_045844562.1 | phage virion morphogenesis protein | - |
| UGYR_RS02865 () | 632334..633404 | - | 1071 | WP_208596676.1 | glycosaminoglycan attachment site | - |
| UGYR_RS02870 () | 633751..634389 | + | 639 | WP_045844125.1 | phage baseplate assembly protein V | - |
| UGYR_RS02875 () | 634386..634736 | + | 351 | WP_038276603.1 | GPW/gp25 family protein | - |
| UGYR_RS02880 () | 634741..635649 | + | 909 | WP_038276605.1 | baseplate assembly protein | - |
| UGYR_RS02885 () | 635642..636259 | + | 618 | WP_045844126.1 | phage tail protein I | - |
| UGYR_RS02890 () | 636249..637631 | + | 1383 | WP_045844127.1 | phage tail protein | - |
| UGYR_RS02895 () | 637631..638299 | + | 669 | WP_045844128.1 | tail fiber assembly protein | - |
| UGYR_RS02900 () | 638427..639596 | + | 1170 | WP_045844129.1 | phage tail sheath protein | - |
| UGYR_RS02905 () | 639611..640126 | + | 516 | WP_038276615.1 | phage major tail tube protein | - |
| UGYR_RS02910 () | 640182..640478 | + | 297 | WP_038276617.1 | phage tail assembly protein | - |
| UGYR_RS02915 () | 640505..640627 | + | 123 | WP_038276619.1 | GpE family phage tail protein | - |
| UGYR_RS02920 () | 640620..643073 | + | 2454 | WP_045844130.1 | phage tail tape measure protein | - |
| UGYR_RS02925 () | 643085..643570 | + | 486 | WP_038276623.1 | phage tail protein | - |
| UGYR_RS02930 () | 643567..644733 | + | 1167 | WP_045844131.1 | phage late control D family protein | - |
| UGYR_RS02935 () | 644827..645045 | + | 219 | WP_045844132.1 | DNA-binding transcriptional regulator | - |
| UGYR_RS02940 () | 645211..646296 | + | 1086 | WP_186368419.1 | Glutathione import ATP-binding protein GsiA ; Integrase | Integrase |
| - () | 646333..646481 | + | 149 | - | - | Antitoxin Detail |
| - () | 646339..646432 | - | 94 | - | - | Toxin Detail |
| UGYR_RS02945 () | 646591..646932 | - | 342 | WP_004721721.1 | YebY family protein | - |
| UGYR_RS02950 () | 647027..647911 | - | 885 | WP_045844133.1 | copper homeostasis membrane protein CopD | - |
| UGYR_RS02955 () | 647913..648299 | - | 387 | WP_038243346.1 | CopC domain-containing protein YobA | - |
| UGYR_RS02960 () | 648704..649219 | - | 516 | WP_004721727.1 | non-heme ferritin | - |
| UGYR_RS02965 () | 649622..649852 | + | 231 | WP_038243344.1 | DNA polymerase III subunit theta | - |
| UGYR_RS02970 () | 649975..650925 | - | 951 | WP_004721733.1 | prolyl aminopeptidase | - |
| UGYR_RS02975 () | 651792..652454 | + | 663 | WP_038276020.1 | exodeoxyribonuclease X | - |
| UGYR_RS02980 () | 652460..654490 | - | 2031 | WP_038276022.1 | prolyl oligopeptidase family serine peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|