NZ_CP0110191..207265

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 207265 bp
Accession: NZ_CP011019        Location: 1..207265         Organism: Escherichia coli strain CI5       Replicon: plasmid unnamed


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
VK74_RS25745 () 302..2283 + 1982 Protein_1 type VI secretion system tip protein VgrG -
VK74_RS25750 () 2294..2760 + 467 Protein_2 type VI secretion protein -
VK74_RS24440 () 2770..3069 + 300 WP_032246098.1 PAAR domain-containing protein -
VK74_RS25755 () 3073..4148 + 1076 Protein_4 type VI secretion system protein TssA -
VK74_RS24450 () 4156..4698 + 543 WP_000152800.1 type VI secretion lipoprotein TssJ -
VK74_RS24455 () 4717..6081 + 1365 WP_046201717.1 type VI secretion system baseplate subunit TssK -
VK74_RS24460 () 6453..7067 + 615 WP_046201718.1 DotU family type IV/VI secretion system protein -
VK74_RS24465 () 7074..10478 + 3405 WP_046201719.1 type VI secretion protein -
VK74_RS24470 () 10482..13013 + 2532 WP_046201720.1 type VI secretion system ATPase TssH -
VK74_RS24475 () 13686..14825 + 1140 WP_046201721.1 type VI secretion system ImpA family N-terminal domain-containing protein -
VK74_RS24480 () 15325..15915 + 591 WP_046201722.1 hypothetical protein -
VK74_RS28655 () 16198..16320 + 123 Protein_12 IS1 family transposase -
VK74_RS28155 () 16584..17180 + 597 WP_077787744.1 hypothetical protein -
VK74_RS24485 () 17189..17661 - 473 Protein_14 transposase family protein -
VK74_RS27465 () 17675..17809 + 135 Protein_15 transposase -
VK74_RS24490 () 18395..18616 + 222 WP_024179415.1 hypothetical protein -
VK74_RS28990 () 18830..18922 - 93 Protein_17 transposase -
VK74_RS24500 () 19170..19399 + 230 Protein_18 alpha/beta hydrolase -
VK74_RS27475 () 19623..19986 + 364 Protein_19 helix-turn-helix domain containing protein -
VK74_RS28660 () 19990..20202 + 213 Protein_20 IS21 family transposase -
VK74_RS24510 () 20209..20577 - 369 WP_032246119.1 hypothetical protein -
VK74_RS27485 () 21478..21585 - 108 Protein_22 IS3 family transposase -
VK74_RS28160 () 21588..22087 - 500 Protein_23 transposase -
VK74_RS27490 () 22128..22319 + 192 Protein_24 recombinase family protein -
VK74_RS24530 () 22582..22812 - 231 WP_046201726.1 hypothetical protein -
VK74_RS25955 () 23052..23177 - 126 Protein_26 IS66 family insertion sequence element accessory protein TnpB -
VK74_RS24540 () 23174..23608 - 435 WP_046201727.1 transposase -
VK74_RS25960 () 24178..24590 - 413 Protein_28 transposase -
VK74_RS24560 () 25020..28784 + 3765 WP_046201728.1 autotransporter outer membrane beta-barrel domain-containing protein -
VK74_RS27495 () 28867..29159 + 293 Protein_30 PbsX family transcriptional regulator -
VK74_RS24570 () 29842..30342 - 501 WP_034173271.1 helix-turn-helix transcriptional regulator -
VK74_RS24575 () 30371..30853 - 483 WP_046201729.1 DNA-directed RNA polymerase sigma-70 factor -
VK74_RS24580 () 30975..33224 - 2250 WP_075262009.1 hemolysin activation protein -
VK74_RS28165 () 34845..38903 - 4059 Protein_34 RTX toxin -
VK74_RS24590 () 39108..40355 - 1248 WP_046201730.1 HlyD family efflux transporter periplasmic adaptor subunit -
VK74_RS24595 () 40415..42562 - 2148 WP_000835433.1 type I secretion system permease/ATPase -
VK74_RS24600 () 42587..43828 - 1242 WP_046201731.1 TolC family protein -
VK74_RS27505 () 43891..44184 - 294 WP_071886270.1 PbsX family transcriptional regulator -
VK74_RS28170 () 45502..45691 - 190 Protein_39 site-specific integrase -
VK74_RS24605 () 46198..46413 + 216 Protein_40 TIGR00156 family protein -
VK74_RS27515 () 46444..46862 - 419 Protein_41 Tn3 family transposase -
VK74_RS25865 () 47331..48176 - 846 WP_052734128.1 AraC family transcriptional regulator -
VK74_RS27520 () 48542..49126 + 585 WP_077787746.1 type 1 fimbrial protein -
VK74_RS24625 () 49233..49952 + 720 WP_046201733.1 molecular chaperone -
VK74_RS24630 () 49974..52484 + 2511 WP_046201734.1 fimbrial biogenesis outer membrane usher protein -
VK74_RS24635 () 52494..53405 + 912 WP_139108882.1 fimbrial protein -
VK74_RS24640 () 53487..53795 + 309 WP_046201735.1 helix-turn-helix domain-containing protein -
VK74_RS28995 () 54086..54394 - 309 Protein_48 hemagglutinin -
VK74_RS24655 () 55030..64722 - 9693 WP_046201737.1 contact-dependent inhibition toxin CdiA -
VK74_RS24660 () 64735..66507 - 1773 WP_046201738.1 ShlB/FhaC/HecB family hemolysin secretion/activation protein -
VK74_RS24665 () 66729..66977 - 249 Protein_51 DNA-binding protein -
VK74_RS27530 () 67063..67497 + 435 WP_053265047.1 transposase -
VK74_RS24670 () 67494..67799 + 306 WP_000624654.1 IS66 family insertion sequence element accessory protein TnpB -
VK74_RS27535 () 67875..69417 + 1543 Protein_54 IS66 family transposase -
VK74_RS27540 () 69448..69710 + 263 Protein_55 hypothetical protein -
VK74_RS24690 () 69812..70821 - 1010 Protein_56 IS3 family transposase -
VK74_RS25970 () 71027..71257 + 231 Protein_57 IS1 family transposase -
VK74_RS24705 () 71449..72027 + 579 WP_001400936.1 recombinase family protein -
VK74_RS24710 () 72020..72292 + 273 WP_046201741.1 hypothetical protein -
VK74_RS24715 () 72336..72664 - 329 Protein_60 transposase -
VK74_RS29000 () 73068..73136 + 69 Protein_61 3'-5' exonuclease -
VK74_RS24720 () 73409..73762 - 354 WP_171819440.1 cytochrome b562 family protein -
VK74_RS24725 () 73842..76052 - 2211 WP_046201744.1 catalase/peroxidase KatP -
VK74_RS24730 () 76398..80510 - 4113 WP_046201745.1 autotransporter outer membrane beta-barrel domain-containing protein -
VK74_RS25780 () 81774..82438 + 665 Protein_65 hypothetical protein -
VK74_RS24745 () 82581..82880 - 300 WP_046201747.1 type II toxin-antitoxin system RelE/ParE family toxin -
VK74_RS24750 () 82870..83133 - 264 WP_046201748.1 hypothetical protein -
VK74_RS24760 () 84072..84929 - 858 WP_034173827.1 incFII family plasmid replication initiator RepA -
VK74_RS24765 () 84922..84996 - 75 WP_001365705.1 RepA leader peptide Tap -
VK74_RS24770 () 85243..85491 - 249 WP_034173828.1 replication regulatory protein RepA -
VK74_RS24775 () 86224..87333 - 1110 WP_034173829.1 N-acetylneuraminate epimerase -
VK74_RS24780 () 87343..88053 - 711 WP_000748140.1 N-acetylneuraminic acid channel protein -
VK74_RS24785 () 88107..88928 - 822 WP_052734129.1 alpha/beta hydrolase -
VK74_RS24790 () 88944..90410 - 1467 WP_034173830.1 MFS transporter -
VK74_RS24795 () 90481..91356 - 876 WP_034173861.1 N-acetylmannosamine kinase -
VK74_RS24800 () 91416..92315 - 900 WP_046201838.1 N-acetylneuraminate lyase -
VK74_RS24805 () 92452..93537 - 1086 WP_077787749.1 hypothetical protein -
VK74_RS24810 () 93607..94335 + 729 WP_046201750.1 transcriptional regulator NanR -
VK74_RS24815 () 94360..95244 - 885 WP_034173833.1 alpha/beta hydrolase -
VK74_RS29005 () 95391..95492 + 102 Protein_80 transposase -
VK74_RS24825 () 96110..96670 - 561 WP_046201751.1 fertility inhibition protein FinO -
VK74_RS24830 () 96725..97459 - 735 WP_075262006.1 type-F conjugative transfer system pilin acetylase TraX -
VK74_RS24835 () 97482..97913 - 432 WP_000451345.1 hypothetical protein -
VK74_RS24840 () 97963..103233 - 5271 WP_046201752.1 conjugative transfer relaxase/helicase TraI -
VK74_RS24845 () 103233..105440 - 2208 WP_046201753.1 type IV conjugative transfer system coupling protein TraD -
VK74_RS24850 () 105692..106423 - 732 WP_046201754.1 complement resistance protein TraT -
VK74_RS24855 () 106437..106946 - 510 WP_000628099.1 conjugal transfer entry exclusion protein TraS -
VK74_RS24860 () 106943..109789 - 2847 WP_046201755.1 conjugal transfer mating pair stabilization protein TraG -
VK74_RS24865 () 109786..111159 - 1374 WP_046201756.1 conjugal transfer protein TraH -
VK74_RS24870 () 111146..111571 - 426 WP_071886275.1 F-type conjugal transfer protein TrbF -
VK74_RS27560 () 111492..111866 - 375 WP_071886276.1 P-type conjugative transfer protein TrbJ -
VK74_RS24875 () 111796..112341 - 546 WP_046201758.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
VK74_RS24880 () 112328..112609 - 282 WP_046201759.1 type-F conjugative transfer system pilin chaperone TraQ -
VK74_RS24885 () 112675..113121 - 447 WP_046201760.1 hypothetical protein -
VK74_RS24890 () 113207..113572 - 366 WP_021572669.1 hypothetical protein -
VK74_RS24895 () 113586..114329 - 744 WP_046201761.1 type-F conjugative transfer system pilin assembly protein TraF -
VK74_RS24900 () 114322..114579 - 258 WP_046201762.1 conjugal transfer protein TrbE -
VK74_RS24905 () 114606..116435 - 1830 WP_046201763.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
VK74_RS24910 () 116432..116854 - 423 WP_046201764.1 HNH endonuclease -
VK74_RS27565 () 116880..117251 - 372 WP_071886277.1 hypothetical protein -
VK74_RS24915 () 117248..117886 - 639 WP_046201765.1 type-F conjugative transfer system pilin assembly protein TrbC -
VK74_RS24920 () 118079..118318 + 240 WP_001066128.1 hypothetical protein -
VK74_RS28700 () 118315..118494 - 180 WP_058153243.1 hypothetical protein -
VK74_RS24925 () 118515..119507 - 993 WP_046201766.1 conjugal transfer pilus assembly protein TraU -
VK74_RS24930 () 119504..120136 - 633 WP_046201767.1 type-F conjugative transfer system protein TraW -
VK74_RS24935 () 120133..120519 - 387 WP_046201768.1 type-F conjugative transfer system protein TrbI -
VK74_RS24940 () 120516..121916 - 1401 Protein_107 type IV secretion system protein TraC -
VK74_RS24945 () 122538..123548 + 1011 Protein_108 group II intron reverse transcriptase/maturase -
VK74_RS24950 () 123587..125125 - 1539 WP_000099202.1 IS66-like element ISEc22 family transposase -
VK74_RS24955 () 125174..125521 - 348 WP_000612626.1 IS66 family insertion sequence element accessory protein TnpB -
VK74_RS24960 () 125518..125922 - 405 WP_000839179.1 IS66 family insertion sequence hypothetical protein -
VK74_RS24965 () 126005..126700 + 696 Protein_112 HNH endonuclease -
VK74_RS24970 () 126785..128011 - 1227 Protein_113 TraC family protein -
VK74_RS28705 () 128144..128491 - 348 WP_046201769.1 hypothetical protein -
VK74_RS24980 () 128519..128737 - 219 WP_046201770.1 hypothetical protein -
VK74_RS24985 () 128817..129290 - 474 WP_046201771.1 hypothetical protein -
VK74_RS24990 () 129283..129696 - 414 WP_046201772.1 hypothetical protein -
VK74_RS27575 () 129689..129910 - 222 WP_046201773.1 conjugal transfer protein TraR -
VK74_RS25000 () 130045..130560 - 516 WP_046201774.1 type IV conjugative transfer system lipoprotein TraV -
VK74_RS25005 () 130557..130808 - 252 WP_046201775.1 conjugal transfer protein TrbG -
VK74_RS25785 () 130820..131155 - 336 WP_139108888.1 conjugal transfer protein TrbD -
VK74_RS25015 () 131109..131690 - 582 WP_071886278.1 conjugal transfer protein TraP -
VK74_RS25020 () 131659..133107 - 1449 WP_046201777.1 conjugal transfer protein TraB -
VK74_RS25025 () 133107..133811 - 705 WP_149026042.1 type-F conjugative transfer system secretin TraK -
VK74_RS25030 () 133822..134388 - 567 WP_046201779.1 type IV conjugative transfer system protein TraE -
VK74_RS25035 () 134410..134721 - 312 WP_046201780.1 type IV conjugative transfer system protein TraL -
VK74_RS25040 () 134736..135101 - 366 WP_046201781.1 type IV conjugative transfer system pilin TraA -
VK74_RS27580 () 135134..135361 - 228 WP_071886279.1 conjugal transfer relaxosome protein TraY -
VK74_RS25045 () 135486..136139 - 654 WP_046201782.1 conjugal transfer protein TraJ -
VK74_RS25050 () 136332..136715 - 384 WP_046201845.1 relaxosome protein TraM -
VK74_RS25055 () 137038..137640 + 603 WP_077787755.1 transglycosylase SLT domain-containing protein -
VK74_RS25060 () 137936..138757 - 822 WP_046201784.1 DUF945 domain-containing protein -
VK74_RS25065 () 138876..139163 - 288 WP_046201785.1 hypothetical protein -
VK74_RS25070 () 139319..139621 - 303 WP_046201786.1 hypothetical protein -
VK74_RS29010 () 139645..139851 - 207 WP_046201787.1 hypothetical protein -
VK74_RS25085 () 140527..140688 - 162 WP_000775238.1 type I toxin-antitoxin system Hok family toxin -
- () 140734..140946 - 213 NuclAT_0 - -
- () 140734..140946 - 213 NuclAT_0 - -
- () 140734..140946 - 213 NuclAT_0 - -
- () 140734..140946 - 213 NuclAT_0 - -
VK74_RS25095 () 140895..141209 - 315 WP_000872077.1 hypothetical protein -
VK74_RS25100 () 141206..141925 - 720 WP_046201788.1 plasmid SOS inhibition protein A -
VK74_RS25105 () 141922..142356 - 435 WP_046201789.1 conjugation system SOS inhibitor PsiB -
VK74_RS25110 () 142411..144369 - 1959 WP_046201790.1 ParB/RepB/Spo0J family partition protein -
VK74_RS25115 () 144430..144663 - 234 WP_046201791.1 DUF905 family protein -
VK74_RS25120 () 144726..145259 - 534 WP_046201792.1 single-stranded DNA-binding protein -
VK74_RS29015 () 145561..146040 + 480 WP_071886281.1 hypothetical protein -
VK74_RS25135 () 146126..146689 - 564 WP_046201795.1 class I SAM-dependent methyltransferase -
VK74_RS25140 () 146736..148097 - 1362 WP_046201796.1 DUF3560 domain-containing protein -
VK74_RS25145 () 148149..148379 - 231 WP_000218642.1 hypothetical protein -
VK74_RS25150 () 149371..149562 - 192 WP_001027495.1 hypothetical protein -
VK74_RS25155 () 149559..149981 - 423 WP_032167172.1 DUF1380 family protein -
VK74_RS25160 () 150028..150330 - 303 WP_139108892.1 antirestriction protein -
VK74_RS29020 () 150865..151635 - 771 WP_046201798.1 hypothetical protein -
VK74_RS25170 () 151680..152114 - 435 WP_000274404.1 DUF1380 family protein -
VK74_RS25175 () 152126..152347 - 222 WP_046201846.1 hypothetical protein -
VK74_RS25180 () 152347..153000 - 654 WP_046201799.1 DNA methylase -
VK74_RS25185 () 153580..155280 + 1701 WP_046201411.1 group II intron reverse transcriptase/maturase -
VK74_RS28190 () 155510..155814 - 305 Protein_155 hypothetical protein -
VK74_RS25195 () 155818..156720 - 903 WP_077787757.1 DUF1281 domain-containing protein -
VK74_RS25200 () 157138..157386 + 249 WP_000618110.1 DinI-like family protein -
VK74_RS25205 () 157383..157820 + 438 WP_046201801.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
VK74_RS25210 () 157820..157948 + 129 Protein_159 protein ImpB -
VK74_RS25215 () 157993..160221 - 2229 WP_032325774.1 Mov34/MPN/PAD-1 family protein -
VK74_RS25220 () 160218..161399 - 1182 WP_032325773.1 hypothetical protein -
VK74_RS25225 () 161535..162389 + 855 WP_032325772.1 WYL domain-containing protein -
VK74_RS25230 () 162402..162920 + 519 WP_000993248.1 hypothetical protein -
VK74_RS28740 () 162967..164190 - 1224 WP_089557530.1 tyrosine-type recombinase/integrase -
VK74_RS28745 () 164269..165177 - 909 Protein_165 site-specific integrase -
VK74_RS25240 () 165174..166172 - 999 WP_032325769.1 site-specific integrase -
VK74_RS25245 () 166235..167380 + 1146 Protein_167 translesion error-prone DNA polymerase V subunit UmuC -
VK74_RS25250 () 167560..168186 + 627 WP_000587689.1 ParA family plasmid-partitioning AAA ATPase -
VK74_RS29025 () 168183..168485 + 303 WP_046201803.1 hypothetical protein -
VK74_RS25800 () 168905..169965 + 1061 Protein_170 IS3 family transposase -
VK74_RS25270 () 170398..171054 + 657 WP_046201804.1 GntR family transcriptional regulator -
VK74_RS25275 () 171105..171869 - 765 WP_046201805.1 gluconate 5-dehydrogenase -
VK74_RS25280 () 171893..172357 - 465 WP_046201806.1 YhcH/YjgK/YiaL family protein -
VK74_RS25285 () 172369..173304 - 936 WP_046201807.1 sugar kinase -
VK74_RS25290 () 173301..174272 - 972 WP_046201808.1 C-terminal binding protein -
VK74_RS25295 () 174565..175839 + 1275 WP_046201809.1 MFS transporter -
VK74_RS25305 () 176357..176758 - 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
VK74_RS28750 () 176691..176948 - 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
VK74_RS25315 () 177041..177694 - 654 WP_046201810.1 CPBP family intramembrane metalloprotease -
VK74_RS28760 () 178015..178125 + 111 Protein_180 IS481 family transposase -
VK74_RS25320 () 178271..182200 - 3930 WP_046201811.1 autotransporter outer membrane beta-barrel domain-containing protein -
VK74_RS25325 () 182744..183142 - 399 WP_046201812.1 hypothetical protein -
VK74_RS25330 () 183154..183507 - 354 WP_052734131.1 hypothetical protein -
VK74_RS25340 () 183877..184296 - 420 WP_046201814.1 Exc2 family lipoprotein -
VK74_RS28765 () 184848..185240 + 393 Protein_185 hypothetical protein -
VK74_RS25350 () 185327..185977 + 651 WP_000993925.1 IS66 family insertion sequence hypothetical protein -
VK74_RS25355 () 185977..186324 + 348 WP_000623562.1 IS66 family insertion sequence element accessory protein TnpB -
VK74_RS25360 () 186344..187915 + 1572 WP_046201816.1 IS66 family transposase -
VK74_RS25365 () 188046..188468 - 423 WP_046201817.1 DUF1380 family protein -
VK74_RS25370 () 188515..188817 - 303 WP_139108889.1 antirestriction protein -
VK74_RS29030 () 189124..189843 - 720 Protein_191 hypothetical protein -
VK74_RS25380 () 190004..191173 + 1170 WP_046201818.1 transposase -
VK74_RS27655 () 191213..191386 + 174 Protein_193 DUF4113 domain-containing protein -
VK74_RS25385 () 191527..192489 - 963 WP_046201819.1 ParB/RepB/Spo0J family partition protein -
VK74_RS25390 () 192486..193691 - 1206 WP_000817642.1 AAA family ATPase -
VK74_RS25395 () 194065..194277 + 213 WP_000402944.1 hypothetical protein -
VK74_RS25400 () 194450..194701 + 252 WP_001132895.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
VK74_RS25405 () 194698..194985 + 288 WP_001270421.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
VK74_RS25815 () 194999..195258 + 260 Protein_199 hypothetical protein -
VK74_RS25415 () 195271..195561 + 291 WP_046201820.1 hypothetical protein -
VK74_RS28770 () 195608..195975 + 368 Protein_201 DDE-type integrase/transposase/recombinase -
VK74_RS25435 () 196619..197596 + 978 WP_000361612.1 RepB family plasmid replication initiator protein -
VK74_RS25440 () 197875..198615 - 741 WP_046201823.1 tyrosine-type recombinase/integrase -
VK74_RS25980 () 198736..198897 - 162 WP_064756529.1 hypothetical protein -
VK74_RS25820 () 199209..200161 - 953 Protein_205 IS630 family transposase -
VK74_RS25455 () 200624..201127 - 504 WP_000450723.1 hypothetical protein -
VK74_RS25460 () 201920..202396 + 477 WP_000072543.1 type VI secretion system contractile sheath small subunit -
VK74_RS25465 () 202399..203877 + 1479 WP_000150697.1 type VI secretion system contractile sheath large subunit -
VK74_RS25470 () 203887..204405 + 519 WP_046201825.1 hypothetical protein -
VK74_RS25475 () 204413..204835 + 423 WP_046201826.1 lysozyme family protein -
VK74_RS25480 () 204828..206630 + 1803 WP_046201827.1 type VI secretion system baseplate subunit TssF -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance