MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 27036 bp
Accession: NZ_CP010955 Location: 1..27036 Organism: Sphingobium sp. YBL2 Replicon: plasmid 1pYBL2-1
Accession: NZ_CP010955 Location: 1..27036 Organism: Sphingobium sp. YBL2 Replicon: plasmid 1pYBL2-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TZ53_RS22185 () | 55..819 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| TZ53_RS22190 () | 1214..1588 | + | 375 | WP_013041565.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| TZ53_RS22195 () | 1585..1911 | + | 327 | WP_006964370.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| TZ53_RS22200 () | 1911..2153 | + | 243 | WP_013041566.1 | hypothetical protein | - |
| TZ53_RS22205 () | 2146..2445 | + | 300 | WP_013041567.1 | hypothetical protein | - |
| TZ53_RS22210 () | 2466..3578 | - | 1113 | WP_030092736.1 | muramidase | - |
| TZ53_RS22215 () | 3581..5296 | - | 1716 | WP_030092735.1 | P-type conjugative transfer protein TrbL | - |
| TZ53_RS22220 () | 5307..5549 | - | 243 | WP_019053956.1 | EexN family lipoprotein | - |
| TZ53_RS22225 () | 5559..6314 | - | 756 | WP_022675885.1 | P-type conjugative transfer protein TrbJ | - |
| TZ53_RS22230 () | 6340..7689 | - | 1350 | WP_019053954.1 | hypothetical protein | - |
| TZ53_RS22235 () | 7720..8493 | - | 774 | WP_019053953.1 | SPOR domain-containing protein | - |
| TZ53_RS22240 () | 8496..9479 | - | 984 | WP_006964392.1 | P-type conjugative transfer protein TrbG | - |
| TZ53_RS22245 () | 9497..10216 | - | 720 | WP_006964394.1 | IncP-type conjugative transfer protein TrbF | - |
| TZ53_RS27390 () | 10203..10388 | - | 186 | WP_044663209.1 | hypothetical protein | - |
| TZ53_RS22255 () | 10560..13469 | + | 2910 | WP_044663210.1 | Tn3 family transposase | - |
| TZ53_RS22260 () | 13612..14478 | + | 867 | WP_006953933.1 | recombinase family protein | - |
| TZ53_RS22265 () | 14539..16896 | - | 2358 | Protein_16 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| TZ53_RS22270 () | 16893..17225 | - | 333 | WP_026149854.1 | conjugal transfer protein TrbD | - |
| TZ53_RS22275 () | 17244..17624 | - | 381 | WP_006964400.1 | TrbC/VirB2 family protein | - |
| TZ53_RS22280 () | 17638..18603 | - | 966 | WP_026149853.1 | P-type conjugative transfer ATPase TrbB | - |
| TZ53_RS22285 () | 18710..19111 | - | 402 | WP_019053950.1 | helix-turn-helix domain-containing protein | - |
| TZ53_RS22290 () | 19625..19864 | + | 240 | WP_019053948.1 | hypothetical protein | - |
| TZ53_RS22295 () | 20043..20810 | + | 768 | WP_006954207.1 | GntR family transcriptional regulator | - |
| TZ53_RS22300 () | 21150..21563 | + | 414 | WP_006954205.1 | antirestriction protein | - |
| TZ53_RS22305 () | 21668..21931 | + | 264 | WP_006954203.1 | hypothetical protein | - |
| TZ53_RS22310 () | 22037..22366 | + | 330 | WP_006954201.1 | hypothetical protein | - |
| TZ53_RS22315 () | 22359..22658 | + | 300 | WP_019053944.1 | hypothetical protein | - |
| TZ53_RS22320 () | 22655..23401 | + | 747 | WP_006954197.1 | ParA family protein | - |
| TZ53_RS22325 () | 23404..24426 | + | 1023 | WP_044663212.1 | ParB/RepB/Spo0J family partition protein | - |
| TZ53_RS22330 () | 24774..25406 | + | 633 | WP_044663213.1 | hypothetical protein | - |
| TZ53_RS22335 () | 25441..25881 | - | 441 | WP_019053940.1 | hypothetical protein | - |
| TZ53_RS22340 () | 25881..26606 | - | 726 | WP_006954191.1 | IncP-type DNA transfer protein TraL | - |
| TZ53_RS27255 () | 26603..26989 | - | 387 | WP_159368310.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|