MGE detailed information
MGE type: Prophage MGE length: 63007 bp
Accession: NZ_CP010892 Location: 6224928..6287934 Organism: Pseudomonas sp. MRSN12121 Replicon: chromosome
Accession: NZ_CP010892 Location: 6224928..6287934 Organism: Pseudomonas sp. MRSN12121 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TO66_RS28390 () | 6220292..6221440 | - | 1149 | WP_044465356.1 | iron-containing alcohol dehydrogenase | - |
| TO66_RS28395 () | 6221572..6222396 | - | 825 | WP_044465357.1 | ABC transporter permease | - |
| TO66_RS28400 () | 6222410..6223657 | - | 1248 | WP_044465358.1 | ABC transporter permease | - |
| TO66_RS28405 () | 6223822..6224883 | - | 1062 | WP_044465359.1 | ABC transporter substrate-binding protein | - |
| TO66_RS28410 () | 6224928..6226052 | - | 1125 | WP_044465360.1 | hypothetical protein | VF |
| TO66_RS28415 () | 6226277..6226906 | - | 630 | WP_044465361.1 | hypothetical protein | VF |
| TO66_RS28420 () | 6226952..6229345 | - | 2394 | WP_044465362.1 | sensor histidine kinase | - |
| TO66_RS28425 () | 6229418..6230413 | + | 996 | WP_044465363.1 | alpha/beta hydrolase family protein | - |
| TO66_RS28430 () | 6230477..6231241 | - | 765 | WP_044465364.1 | TerB family tellurite resistance protein | - |
| TO66_RS28435 () | 6231243..6231917 | - | 675 | WP_044465365.1 | hypothetical protein | VF |
| TO66_RS28440 () | 6231914..6232939 | - | 1026 | WP_044465366.1 | phosphotransferase | - |
| TO66_RS28445 () | 6233070..6235895 | + | 2826 | WP_044465367.1 | LPS-assembly protein LptD | - |
| TO66_RS28450 () | 6235876..6237192 | + | 1317 | WP_148558613.1 | hypothetical protein | VF |
| TO66_RS28455 () | 6237189..6238178 | + | 990 | WP_044465369.1 | hypothetical protein | VF |
| TO66_RS28460 () | 6238175..6238993 | + | 819 | WP_044465370.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| TO66_RS28465 () | 6239117..6239497 | + | 381 | WP_044465371.1 | Co2+/Mg2+ efflux protein ApaG | - |
| TO66_RS28470 () | 6239497..6240378 | + | 882 | WP_044465372.1 | symmetrical bis(5'-nucleosyl)-tetraphosphatase | - |
| TO66_RS28475 () | 6240411..6240740 | + | 330 | WP_044465373.1 | thiosulfate sulfurtransferase GlpE | - |
| TO66_RS28480 () | 6241037..6242959 | + | 1923 | WP_025807357.1 | PrkA family serine protein kinase | - |
| TO66_RS28485 () | 6243139..6244410 | + | 1272 | WP_044465374.1 | YeaH/YhbH family protein | - |
| TO66_RS28490 () | 6244407..6245969 | + | 1563 | WP_044465375.1 | SpoVR family protein | - |
| TO66_RS28495 () | 6246035..6247264 | + | 1230 | WP_044465376.1 | multifunctional CCA addition/repair protein | - |
| TO66_RS28500 () | 6247328..6247846 | - | 519 | WP_044465377.1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | - |
| TO66_RS28505 () | 6247837..6248190 | - | 354 | WP_044465378.1 | dihydroneopterin aldolase | - |
| TO66_RS28510 () | 6248265..6248834 | + | 570 | WP_044465379.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| TO66_RS28515 () | 6248874..6249899 | - | 1026 | WP_044465380.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| TO66_RS33010 () | 6250100..6250315 | + | 216 | WP_002551877.1 | 30S ribosomal protein S21 | - |
| TO66_RS28525 () | 6250781..6252745 | + | 1965 | WP_044465381.1 | DNA primase | - |
| TO66_RS28530 () | 6252813..6254660 | + | 1848 | WP_044465382.1 | RNA polymerase sigma factor RpoD | - |
| TO66_RS28535 () | 6254781..6258524 | + | 3744 | WP_044465383.1 | hypothetical protein | VF |
| TO66_RS28545 () | 6258665..6259729 | - | 1065 | WP_044465384.1 | hypothetical protein ; Integrase | Integrase |
| TO66_RS28550 () | 6259733..6259969 | - | 237 | WP_044465385.1 | helix-turn-helix domain-containing protein | - |
| TO66_RS28555 () | 6260419..6262992 | + | 2574 | WP_156162135.1 | toprim domain-containing protein | - |
| TO66_RS28560 () | 6263461..6263754 | + | 294 | WP_044465386.1 | hypothetical protein | - |
| TO66_RS28565 () | 6263765..6264016 | + | 252 | WP_044465387.1 | hypothetical protein | - |
| TO66_RS28570 () | 6264080..6264376 | + | 297 | WP_044466180.1 | hypothetical protein | - |
| TO66_RS28575 () | 6264366..6264644 | + | 279 | WP_044465388.1 | hypothetical protein | - |
| TO66_RS28580 () | 6264656..6264880 | + | 225 | WP_156162104.1 | hypothetical protein | - |
| TO66_RS33530 () | 6265477..6265692 | + | 216 | WP_156162105.1 | hypothetical protein | - |
| TO66_RS28585 () | 6265665..6265928 | - | 264 | WP_044465390.1 | ogr/Delta-like zinc finger family protein | - |
| TO66_RS28590 () | 6266009..6266797 | - | 789 | WP_177330382.1 | phage portal protein | - |
| TO66_RS28595 () | 6266787..6268841 | - | 2055 | WP_044465391.1 | terminase family protein | - |
| TO66_RS28600 () | 6269003..6269908 | + | 906 | WP_044465392.1 | GPO family capsid scaffolding protein | - |
| TO66_RS28605 () | 6269910..6270953 | + | 1044 | WP_044465393.1 | phage major capsid protein, P2 family | - |
| TO66_RS28610 () | 6270950..6271660 | + | 711 | WP_044465394.1 | terminase | - |
| TO66_RS28615 () | 6271758..6272219 | + | 462 | WP_044465395.1 | head completion/stabilization protein | - |
| TO66_RS28620 () | 6272216..6272662 | + | 447 | WP_044465396.1 | phage tail protein | - |
| TO66_RS28625 () | 6272655..6273338 | + | 684 | WP_044465397.1 | phage virion morphogenesis protein | - |
| TO66_RS28630 () | 6273350..6274465 | + | 1116 | WP_044465398.1 | DUF2586 family protein | - |
| TO66_RS28635 () | 6274472..6274924 | + | 453 | WP_044465399.1 | DUF2597 family protein | - |
| TO66_RS28640 () | 6274924..6275133 | + | 210 | WP_044465400.1 | TraR/DksA family transcriptional regulator | - |
| TO66_RS28645 () | 6275130..6275423 | + | 294 | WP_044465401.1 | hypothetical protein | - |
| TO66_RS28650 () | 6275420..6275953 | + | 534 | WP_044465402.1 | lysozyme | - |
| TO66_RS28655 () | 6275950..6276438 | + | 489 | WP_044465403.1 | lysis system i-spanin subunit Rz | - |
| TO66_RS28660 () | 6276476..6276763 | + | 288 | WP_044465404.1 | putative phage tail assembly chaperone | - |
| TO66_RS28670 () | 6276933..6278918 | + | 1986 | WP_044465406.1 | phage tail tape measure protein | - |
| TO66_RS28675 () | 6278915..6279232 | + | 318 | WP_044465407.1 | DUF2590 family protein | - |
| TO66_RS28680 () | 6279229..6280404 | + | 1176 | WP_044465408.1 | baseplate J/gp47 family protein | - |
| TO66_RS28685 () | 6280401..6280925 | + | 525 | WP_044465409.1 | phage tail protein | - |
| TO66_RS28690 () | 6280935..6282605 | + | 1671 | WP_044465410.1 | phage tail protein | - |
| TO66_RS28695 () | 6282614..6283321 | + | 708 | WP_044465411.1 | hypothetical protein | - |
| TO66_RS28700 () | 6283318..6284232 | + | 915 | WP_044465412.1 | hypothetical protein | - |
| TO66_RS28705 () | 6284229..6284756 | + | 528 | WP_044465413.1 | hypothetical protein | - |
| TO66_RS28710 () | 6284763..6285467 | + | 705 | WP_044465414.1 | hypothetical protein | - |
| TO66_RS28715 () | 6285440..6286384 | + | 945 | WP_044465415.1 | hypothetical protein | - |
| TO66_RS28720 () | 6286381..6287022 | - | 642 | WP_044465416.1 | hypothetical protein | - |
| TO66_RS28725 () | 6287246..6287428 | + | 183 | WP_044465417.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| TO66_RS28730 () | 6287500..6287934 | + | 435 | WP_044465418.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| TO66_RS28735 () | 6288480..6288728 | + | 249 | WP_044465419.1 | hypothetical protein | - |
| TO66_RS28740 () | 6289321..6289959 | + | 639 | WP_082061182.1 | lipopolysaccharide biosynthesis protein | - |
| TO66_RS28745 () | 6290031..6292385 | - | 2355 | WP_044465421.1 | glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|