NZ_CP0108701..184737

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 184737 bp
Accession: NZ_CP010870        Location: 1..184737         Organism: Confluentimicrobium sp. EMB200-NS6 strain EMBL200_NS6       Replicon: plasmid pNS6001


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
TQ29_RS17730 () 1..517 + 517 WP_173585987.1 type IV secretion system protein -
TQ29_RS17735 () 869..1460 + 592 Protein_1 restriction endonuclease subunit S -
TQ29_RS17740 () 1460..2977 + 1518 Protein_2 type I restriction-modification system subunit M -
TQ29_RS20410 () 2967..3611 + 645 WP_082386769.1 restriction endonuclease subunit S -
TQ29_RS17745 () 3580..4152 + 573 WP_082386770.1 restriction endonuclease subunit S -
TQ29_RS17750 () 4152..5873 + 1722 WP_054540509.1 TIGR04141 family sporadically distributed protein -
TQ29_RS17755 () 5870..9094 + 3225 WP_173585988.1 type I restriction endonuclease subunit R -
TQ29_RS17760 () 9091..9807 + 717 WP_054540511.1 M48 family metallopeptidase -
TQ29_RS17765 () 9972..11972 - 2001 WP_054540512.1 Protein VirD4 VF
TQ29_RS17770 () 11981..14314 - 2334 WP_054540513.1 T-DNA border endonuclease VirD2 Relaxase
TQ29_RS17775 () 14301..14894 - 594 WP_054540514.1 transposase -
TQ29_RS17780 () 15414..15620 - 207 WP_007120662.1 hypothetical protein -
TQ29_RS17785 () 16262..17287 - 1026 WP_054540614.1 hypothetical protein -
TQ29_RS17790 () 17412..18341 - 930 WP_054540515.1 DUF2493 domain-containing protein -
TQ29_RS17795 () 18971..19246 + 276 WP_054540516.1 hypothetical protein -
TQ29_RS17800 () 19246..19578 + 333 WP_054540517.1 hypothetical protein -
TQ29_RS17805 () 20072..21694 + 1623 WP_054540518.1 cation:proton antiporter -
TQ29_RS17810 () 21748..24471 - 2724 WP_054540519.1 putative cation-transporting ATPase F VF
TQ29_RS17815 () 24643..25530 - 888 WP_082386772.1 universal stress protein -
TQ29_RS17820 () 25827..26735 - 909 WP_054540521.1 universal stress protein -
TQ29_RS17825 () 26732..28156 - 1425 WP_054540522.1 Na+/H+ antiporter NhaA -
TQ29_RS17830 () 28194..28829 - 636 WP_082386773.1 carbonic anhydrase -
TQ29_RS17835 () 28896..29138 - 243 WP_054540524.1 zf-TFIIB domain-containing protein -
TQ29_RS17840 () 29315..30247 + 933 WP_054540525.1 hydrogen peroxide-inducible genes activator -
TQ29_RS17845 () 30674..31402 - 729 WP_054540526.1 DUF736 family protein -
TQ29_RS20420 () 31527..31829 - 303 Protein_25 hypothetical protein -
TQ29_RS17855 () 31930..32391 - 462 WP_054540528.1 hypothetical protein -
TQ29_RS17860 () 32393..32779 - 387 WP_054540529.1 hypothetical protein -
TQ29_RS17865 () 32903..37165 - 4263 WP_054540530.1 strawberry notch family protein -
TQ29_RS17870 () 37268..37420 - 153 WP_043754116.1 hypothetical protein -
TQ29_RS20985 () 37410..37574 - 165 WP_009819683.1 hypothetical protein -
TQ29_RS17875 () 37669..38187 - 519 WP_024099306.1 type II toxin-antitoxin system YhaV family toxin -
TQ29_RS17880 () 38184..38510 - 327 WP_005668772.1 type II toxin-antitoxin system PrlF family antitoxin -
TQ29_RS17885 () 38638..39288 - 651 WP_054540531.1 hypothetical protein -
TQ29_RS17890 () 39288..39881 - 594 WP_054540532.1 hypothetical protein -
TQ29_RS17895 () 39958..41940 - 1983 WP_054540533.1 ParB/RepB/Spo0J family partition protein -
TQ29_RS17900 () 42096..42485 - 390 WP_054540534.1 DUF3768 domain-containing protein -
TQ29_RS17905 () 42553..42783 - 231 WP_054540535.1 hypothetical protein -
TQ29_RS17910 () 42807..43748 - 942 WP_054540536.1 DUF1738 domain-containing protein -
TQ29_RS17915 () 43789..44274 - 486 WP_054540537.1 hypothetical protein -
TQ29_RS17920 () 44553..45755 + 1203 WP_054540538.1 Fic family protein -
TQ29_RS17925 () 45887..47122 - 1236 WP_012187363.1 replication initiation protein RepC -
TQ29_RS17930 () 47300..48316 - 1017 WP_054540539.1 plasmid partitioning protein RepB -
TQ29_RS17935 () 48313..49500 - 1188 WP_027263652.1 Sporulation initiation inhibitor protein Soj VF
TQ29_RS17940 () 49814..50041 + 228 WP_054540540.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
TQ29_RS17945 () 50031..50426 + 396 WP_012187367.1 PIN domain-containing protein Toxin Detail
TQ29_RS17950 () 50410..51306 - 897 WP_054540541.1 Tn3 family transposase ISPsy42 Transposase
TQ29_RS17955 () 51439..52425 - 987 WP_139211443.1 tyrosine-type recombinase/integrase -
TQ29_RS17960 () 52705..53595 + 891 WP_054540542.1 DUF1403 family protein -
TQ29_RS17965 () 53598..54197 + 600 WP_054540543.1 SMC-Scp complex subunit ScpB -
TQ29_RS20425 () 54181..55215 - 1035 WP_082386774.1 TniQ family protein -
TQ29_RS17970 () 55212..56093 - 882 WP_054540544.1 TniB family NTP-binding protein -
TQ29_RS17975 () 56095..57729 - 1635 WP_054540545.1 IS481 family transposase ISChy6 Transposase
TQ29_RS20430 () 57900..58877 + 978 Protein_53 hypothetical protein -
TQ29_RS17990 () 59089..59916 - 828 WP_009574212.1 universal stress protein -
TQ29_RS17995 () 60171..60410 + 240 WP_009574213.1 helix-turn-helix domain-containing protein -
TQ29_RS18000 () 60546..63269 + 2724 WP_054540548.1 putative cation-transporting ATPase F VF
TQ29_RS18005 () 63885..66677 + 2793 Protein_57 Tn3 family transposase TnpA_ISRsp12 Transposase
TQ29_RS20440 () 66702..66971 - 270 WP_040402893.1 TniQ family protein -
TQ29_RS18010 () 66968..67834 - 867 WP_009573528.1 TniB family NTP-binding protein -
TQ29_RS18015 () 68159..69793 + 1635 WP_157445667.1 Mu transposase C-terminal domain-containing protein -
TQ29_RS18020 () 69795..70673 + 879 WP_054540550.1 TniB family NTP-binding protein -
TQ29_RS18025 () 70670..71455 + 786 WP_054540551.1 TniQ family protein -
TQ29_RS20445 () 71465..71945 - 481 Protein_63 SDR family NAD(P)-dependent oxidoreductase -
TQ29_RS18035 () 71995..72597 - 603 WP_082386777.1 histidine phosphatase family protein -
TQ29_RS18040 () 72621..73208 - 588 WP_054540554.1 Tn3 family transposase TnpR_ISRsp12 Transposase
TQ29_RS18045 () 73372..76254 + 2883 WP_054540555.1 Tn3 family transposase TnpA_ISRsp12 Transposase
TQ29_RS18050 () 76302..76667 + 366 Protein_67 IS30 family transposase ISRssp4 Transposase
TQ29_RS18055 () 77206..77769 + 564 WP_054540556.1 Tn3 family transposase ISPsy42 Transposase
TQ29_RS18060 () 77759..79389 + 1631 Protein_69 IS481 family transposase ISAzs36 Transposase
TQ29_RS18065 () 79409..80383 + 975 WP_054540557.1 AAA family ATPase -
TQ29_RS18070 () 80380..81087 + 708 WP_054540558.1 UPF0149 family protein -
TQ29_RS18075 () 81257..81862 - 606 WP_157445671.1 HTH-type transcriptional repressor KstR2 VF
TQ29_RS18080 () 82080..83756 + 1677 WP_054540616.1 electron transfer flavoprotein-ubiquinone oxidoreductase -
TQ29_RS18085 () 83849..84970 + 1122 WP_054540560.1 thiolase family protein -
TQ29_RS18090 () 84973..87270 + 2298 WP_054540561.1 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein -
TQ29_RS18095 () 87295..89058 + 1764 WP_054540562.1 acyl-CoA dehydrogenase C-terminal domain-containing protein -
TQ29_RS18100 () 89087..90703 + 1617 WP_054540563.1 long-chain-fatty-acid--CoA ligase -
TQ29_RS18105 () 90749..91222 + 474 WP_173585989.1 MaoC family dehydratase -
TQ29_RS18110 () 91428..92186 - 759 WP_054540564.1 IS21 family transposase ISRsp3 Transposase
TQ29_RS20450 () 92281..92584 + 304 Protein_80 IS256 family transposase ISPpa1 Transposase
TQ29_RS18120 () 92739..93974 + 1236 WP_054540566.1 IS21 family transposase ISAzs30 Transposase
TQ29_RS18125 () 93971..94813 + 843 WP_054540567.1 IS21 family transposase ISRel3 Transposase
TQ29_RS20810 () 94893..95027 + 135 Protein_83 IS256 family transposase -
TQ29_RS18130 () 95012..95236 - 225 WP_054540568.1 IS110 family transposase ISMdi9 Transposase
TQ29_RS20815 () 95314..95473 + 160 Protein_85 integrase core domain-containing protein -
TQ29_RS18135 () 95702..96910 - 1209 WP_082386779.1 PQQ-binding-like beta-propeller repeat protein -
TQ29_RS18140 () 97010..97276 + 267 Protein_87 IS21 family transposase ISPkr1 Transposase
TQ29_RS18145 () 97338..97904 - 567 WP_054540570.1 Tn3 family transposase TnpR_ISAli20 Transposase
TQ29_RS18150 () 98045..100996 + 2952 WP_054540571.1 Tn3 family transposase TnpA_ISAli20 Transposase
TQ29_RS20820 () 101077..101151 + 75 Protein_90 PIN domain-containing protein -
TQ29_RS18160 () 101208..102566 + 1359 WP_054540573.1 GntP family permease -
TQ29_RS18165 () 102657..103448 - 792 WP_173585986.1 MBL fold metallo-hydrolase -
TQ29_RS20455 () 103484..103753 - 270 Protein_93 transposase -
TQ29_RS18170 () 103819..104175 + 357 Protein_94 IS5 family transposase ISRsu1 Transposase
TQ29_RS20460 () 104250..105007 + 758 WP_157445669.1 IS5 family transposase ISPak1 Transposase
TQ29_RS18185 () 105107..106132 + 1026 WP_054540619.1 IS110 family transposase ISRhru3 Transposase
TQ29_RS18190 () 107037..109901 + 2865 WP_054540575.1 monovalent cation/H+ antiporter subunit A -
TQ29_RS18195 () 109903..110268 + 366 WP_054540576.1 Na+/H+ antiporter subunit C -
TQ29_RS18200 () 110265..111818 + 1554 WP_054540577.1 monovalent cation/H+ antiporter subunit D -
TQ29_RS18205 () 111820..112311 + 492 WP_054540578.1 Na+/H+ antiporter subunit E -
TQ29_RS18210 () 112308..112577 + 270 WP_054540579.1 K+/H+ antiporter subunit F -
TQ29_RS18215 () 112586..112960 + 375 WP_054540580.1 Na+/H+ antiporter subunit G -
TQ29_RS20825 () 113204..113362 + 159 WP_157445670.1 hypothetical protein -
TQ29_RS20465 () 113560..113863 + 304 Protein_104 AbiEi antitoxin N-terminal domain-containing protein -
TQ29_RS18220 () 114141..114869 - 729 WP_054540581.1 IS21 family transposase ISPkr1 Transposase
TQ29_RS18225 () 114802..115791 - 990 Protein_106 IS21 family transposase ISPkr1 Transposase
TQ29_RS20470 () 115873..116811 + 939 WP_082386780.1 ISL3 family transposase ISRsp8 Transposase
TQ29_RS18235 () 116892..118526 + 1635 WP_157445667.1 Mu transposase C-terminal domain-containing protein -
TQ29_RS18240 () 118528..119406 + 879 WP_054540550.1 TniB family NTP-binding protein -
TQ29_RS18245 () 119403..120188 + 786 WP_054540551.1 TniQ family protein -
TQ29_RS18250 () 120290..121276 - 987 WP_054540583.1 cation diffusion facilitator family transporter -
TQ29_RS18255 () 121278..121940 - 663 WP_008327266.1 TVP38/TMEM64 family protein -
TQ29_RS18260 () 121944..122393 - 450 WP_054540584.1 hypothetical protein -
TQ29_RS18265 () 122555..123040 - 486 WP_054540585.1 hypothetical protein -
TQ29_RS18270 () 123081..123554 - 474 WP_054540586.1 rhodanese-like domain-containing protein -
TQ29_RS18275 () 123743..124465 + 723 WP_054540587.1 Transcriptional regulatory protein OmpR VF
TQ29_RS18280 () 124465..125931 + 1467 WP_054540588.1 HAMP domain-containing protein -
TQ29_RS18285 () 125981..126172 + 192 WP_054540620.1 SHOCT domain-containing protein -
TQ29_RS18290 () 126237..128237 + 2001 WP_054540589.1 Cytochrome c-type biogenesis protein CcmF VF
TQ29_RS18295 () 128246..128812 + 567 WP_054540590.1 DsbE family thiol:disulfide interchange protein -
TQ29_RS18300 () 128809..129282 + 474 WP_054540591.1 cytochrome c-type biogenesis protein CcmH -
TQ29_RS18305 () 129279..130430 + 1152 WP_054540592.1 c-type cytochrome biogenesis protein CcmI -
TQ29_RS18310 () 130459..132588 - 2130 WP_054540593.1 thioredoxin family protein -
TQ29_RS18315 () 132872..133174 - 303 WP_054540594.1 DUF2933 domain-containing protein -
TQ29_RS18320 () 133331..133891 + 561 WP_054540595.1 L,D-transpeptidase -
TQ29_RS18325 () 133920..134378 + 459 WP_054540596.1 cytochrome c -
TQ29_RS18330 () 134751..135323 + 573 WP_054540597.1 cytochrome c -
TQ29_RS18335 () 135326..136243 + 918 WP_054540598.1 cytochrome c -
TQ29_RS18340 () 136287..137681 + 1395 WP_038008397.1 multicopper oxidase family protein -
TQ29_RS18345 () 137678..138160 + 483 WP_007803408.1 cytochrome c -
TQ29_RS18350 () 138162..138893 + 732 WP_009807488.1 DsbA family protein -
TQ29_RS20475 () 138936..139136 - 201 WP_007803412.1 heavy-metal-associated domain-containing protein -
TQ29_RS18355 () 139289..141799 + 2511 WP_054540621.1 heavy metal translocating P-type ATPase -
TQ29_RS18360 () 141812..142210 + 399 WP_038008399.1 Cu(I)-responsive transcriptional regulator -
TQ29_RS18365 () 142232..142996 - 765 WP_173585990.1 glutaredoxin -
TQ29_RS18370 () 143009..143845 - 837 WP_012187184.1 DUF305 domain-containing protein -
TQ29_RS20480 () 144067..144606 + 540 WP_173585993.1 L,D-transpeptidase -
TQ29_RS18380 () 144732..145994 + 1263 WP_054540599.1 multicopper oxidase family protein -
TQ29_RS18385 () 146135..146620 + 486 WP_054540600.1 disulfide bond formation protein B -
TQ29_RS18390 () 146663..147328 + 666 WP_054540601.1 L,D-transpeptidase -
TQ29_RS18395 () 147405..148016 - 612 WP_054540624.1 hypothetical protein -
TQ29_RS18400 () 148480..148968 + 489 WP_054540625.1 calcium-binding protein -
TQ29_RS18405 () 149109..149495 + 387 WP_007803435.1 DUF302 domain-containing protein -
TQ29_RS18410 () 149601..150521 + 921 WP_007803438.1 prolipoprotein diacylglyceryl transferase -
TQ29_RS18415 () 150708..152945 + 2238 WP_173585994.1 copper-translocating P-type ATPase -
TQ29_RS18420 () 152994..154331 + 1338 WP_007803442.1 APC family permease -
TQ29_RS18425 () 154339..154983 - 645 WP_054540602.1 hypothetical protein -
TQ29_RS20835 () 155093..155212 + 120 Protein_148 IS5/IS1182 family transposase -
TQ29_RS18430 () 155200..155922 + 723 WP_007803446.1 cytochrome C biogenesis protein CcdA -
TQ29_RS18435 () 156116..156781 + 666 WP_007803448.1 L,D-transpeptidase -
TQ29_RS20485 () 156829..157101 - 273 WP_012187176.1 hypothetical protein -
TQ29_RS18440 () 157462..159648 + 2187 WP_007803450.1 cation-translocating P-type ATPase -
TQ29_RS18445 () 159642..159899 - 258 WP_007803452.1 hypothetical protein -
TQ29_RS18450 () 160015..160473 + 459 WP_008327326.1 Transcriptional regulator MntR VF
TQ29_RS20990 () 160568..160735 - 168 WP_007803456.1 hypothetical protein -
TQ29_RS18460 () 160735..162306 - 1572 WP_009807490.1 apolipoprotein N-acyltransferase -
TQ29_RS18465 () 162303..162776 - 474 WP_007803461.1 Lipoprotein signal peptidase VF
TQ29_RS18470 () 162781..163563 - 783 WP_054540603.1 ZIP family metal transporter -
TQ29_RS18475 () 163586..164044 - 459 WP_007803465.1 DUF411 domain-containing protein -
TQ29_RS18480 () 164048..165421 - 1374 WP_054540604.1 M23 family metallopeptidase -
TQ29_RS18485 () 165418..166044 - 627 WP_007803468.1 SCO family protein -
TQ29_RS18490 () 166044..166511 - 468 WP_028288644.1 copper chaperone PCu(A)C -
TQ29_RS18495 () 166537..167196 - 660 WP_054540605.1 thioredoxin domain-containing protein -
TQ29_RS18500 () 167193..167615 - 423 WP_007803474.1 disulfide bond formation protein B -
TQ29_RS18505 () 167621..168187 - 567 WP_007803475.1 SCO family protein -
TQ29_RS18510 () 168401..168829 + 429 WP_007803476.1 IS607 family transposase ISChh1 Transposase
TQ29_RS18515 () 168912..169532 + 621 WP_008327361.1 cation diffusion facilitator family transporter -
TQ29_RS18520 () 169602..170165 + 564 WP_007803479.1 transglutaminase-like domain-containing protein -
TQ29_RS18525 () 170155..171120 + 966 WP_007803480.1 cation diffusion facilitator family transporter -
TQ29_RS18530 () 171092..171403 + 312 WP_007803481.1 STAS/SEC14 domain-containing protein -
TQ29_RS18535 () 171991..172452 + 462 WP_054540606.1 hypothetical protein -
TQ29_RS18540 () 172556..172780 - 225 WP_054540607.1 hypothetical protein -
TQ29_RS18545 () 172947..173204 - 258 WP_054540608.1 helix-turn-helix domain-containing protein -
TQ29_RS18550 () 173329..173580 - 252 WP_054540609.1 hypothetical protein -
TQ29_RS18555 () 173791..174159 + 369 WP_008327368.1 hypothetical protein -
TQ29_RS18560 () 174203..174817 + 615 WP_054540610.1 lytic transglycosylase domain-containing protein -
TQ29_RS18565 () 174814..175107 + 294 WP_009503803.1 Type IV secretion system protein virB2 VF
TQ29_RS18570 () 175100..175378 + 279 WP_054540611.1 hypothetical protein VF
TQ29_RS18575 () 175368..177731 + 2364 WP_054540612.1 type IV secretion system DNA-binding domain-containing protein -
TQ29_RS20995 () 177728..177895 + 168 WP_008327378.1 hypothetical protein -
TQ29_RS18580 () 177885..179039 + 1155 WP_173585991.1 lytic transglycosylase domain-containing protein -
TQ29_RS18585 () 179039..179848 + 810 WP_040884167.1 conjugal transfer protein TraF -
TQ29_RS18590 () 179864..180517 + 654 WP_043755065.1 type IV secretion system protein -
TQ29_RS18595 () 180529..181215 + 687 WP_173585992.1 Protein virB9 VF
TQ29_RS18600 () 181212..182591 + 1380 WP_043755071.1 Type IV secretion system protein PtlG VF
TQ29_RS18605 () 182596..183582 + 987 WP_043755074.1 Type IV secretion system protein VirB11 VF
TQ29_RS18610 () 183579..183767 + 189 WP_054540613.1 hypothetical protein -
TQ29_RS18615 () 184175..184737 + 563 WP_162231844.1 type IV secretion system protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance