MGE detailed information
MGE type: Prophage MGE length: 55785 bp
Accession: NZ_CP010829 Location: 280908..336692 Organism: Shigella sonnei strain FORC_011 Replicon: chromosome
Accession: NZ_CP010829 Location: 280908..336692 Organism: Shigella sonnei strain FORC_011 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC11_RS01350 (276778) | 276778..277191 | - | 414 | WP_000611742.1 | type VI secretion system baseplate subunit TssE | - |
| FORC11_RS01355 (277198) | 277198..278673 | - | 1476 | Protein_252 | type VI secretion system contractile sheath large subunit | - |
| FORC11_RS01360 (278724) | 278724..278948 | - | 225 | WP_000123970.1 | hypothetical protein | - |
| FORC11_RS01365 (278983) | 278983..279483 | - | 501 | WP_000037389.1 | type VI secretion system contractile sheath small subunit | - |
| FORC11_RS01375 (280180) | 280180..280698 | + | 519 | WP_001142968.1 | Hcp family type VI secretion system effector | - |
| FORC11_RS33085 (280731) | 280731..280868 | + | 138 | WP_001343723.1 | hypothetical protein | - |
| FORC11_RS01385 (280908) | 280908..283049 | + | 2142 | WP_000103365.1 | hypothetical protein | VF |
| FORC11_RS01390 (283125) | 283125..287333 | + | 4209 | WP_000508696.1 | hypothetical protein | VF |
| FORC11_RS01395 (287345) | 287345..287794 | + | 450 | WP_005141515.1 | RHS element protein dsORF-h1 | - |
| FORC11_RS01405 (288056) | 288056..289192 | + | 1137 | Protein_260 | ISAs1 family transposase ISEc1 | Transposase |
| FORC11_RS01410 (289230) | 289230..289640 | + | 411 | WP_162772774.1 | hypothetical protein | - |
| FORC11_RS01415 (289640) | 289640..290017 | + | 378 | WP_001077737.1 | hypothetical protein | - |
| FORC11_RS01420 (290486) | 290486..291622 | + | 1137 | WP_000420787.1 | ISAs1 family transposase ISEc1 | Transposase |
| FORC11_RS01425 (291664) | 291664..292434 | - | 771 | WP_001118061.1 | 2-oxoglutaramate amidase | - |
| FORC11_RS01430 (292615) | 292615..293061 | + | 447 | WP_005141527.1 | Ivy family C-type lysozyme inhibitor | - |
| FORC11_RS01435 (293104) | 293104..295548 | - | 2445 | WP_000973074.1 | hypothetical protein | VF |
| FORC11_RS01440 (295788) | 295788..296366 | + | 579 | WP_000284050.1 | hypothetical protein | VF |
| FORC11_RS01445 (296572) | 296572..297339 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| FORC11_RS01450 (297310) | 297310..298050 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| FORC11_RS01455 (298206) | 298206..298484 | - | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| FORC11_RS01460 (298487) | 298487..298747 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| FORC11_RS33090 (298875) | 298875..299039 | - | 165 | WP_237158187.1 | hypothetical protein | VF |
| FORC11_RS01465 (298963) | 298963..299706 | + | 744 | WP_237158188.1 | hypothetical protein | VF |
| FORC11_RS32575 (300747) | 300747..300875 | + | 129 | Protein_275 | ISAs1 family transposase | - |
| FORC11_RS01475 (300946) | 300946..301443 | + | 498 | WP_000006258.1 | REP-associated tyrosine transposase RayT | - |
| FORC11_RS01480 (301566) | 301566..303278 | - | 1713 | Protein_277 | hypothetical protein | VF |
| FORC11_RS01485 (303250) | 303250..304035 | + | 786 | WP_000207568.1 | hypothetical protein | VF |
| FORC11_RS01490 (304106) | 304106..305161 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| FORC11_RS01495 (305158) | 305158..305610 | + | 453 | WP_001059889.1 | GNAT family N-acetyltransferase | - |
| FORC11_RS01500 (305856) | 305856..306377 | + | 522 | Protein_281 | RNA ligase RtcB family protein | - |
| FORC11_RS01505 (306401) | 306401..307597 | - | 1197 | WP_000140459.1 | IS110 family transposase ISEc20 | Transposase |
| FORC11_RS27185 (307814) | 307814..308443 | + | 630 | Protein_283 | RNA ligase RtcB family protein | - |
| FORC11_RS01515 (308440) | 308440..309054 | + | 615 | WP_000602134.1 | peptide chain release factor H | - |
| FORC11_RS01520 (309111) | 309111..310568 | - | 1458 | WP_001293027.1 | cytosol nonspecific dipeptidase | - |
| FORC11_RS01525 (310829) | 310829..311287 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (311883) | 311883..311963 | + | 81 | NuclAT_10 | - | - |
| - (311883) | 311883..311963 | + | 81 | NuclAT_10 | - | - |
| - (311883) | 311883..311963 | + | 81 | NuclAT_10 | - | - |
| - (311883) | 311883..311963 | + | 81 | NuclAT_10 | - | - |
| FORC11_RS01530 (311379) | 311379..312623 | + | 1245 | WP_000189530.1 | esterase FrsA | - |
| FORC11_RS01535 (312681) | 312681..313082 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| FORC11_RS01540 (313121) | 313121..314176 | - | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| FORC11_RS01545 (314464) | 314464..315567 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| FORC11_RS01550 (315579) | 315579..316832 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| FORC11_RS33095 (317628) | 317628..317786 | + | 159 | WP_000788777.1 | hypothetical protein | - |
| FORC11_RS01575 (320686) | 320686..321717 | + | 1032 | WP_005136263.1 | IS630 family transposase IS630 | Transposase |
| FORC11_RS01580 (321969) | 321969..322666 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| FORC11_RS01585 (322671) | 322671..323636 | + | 966 | Protein_296 | hypothetical protein | - |
| FORC11_RS30685 (323794) | 323794..324950 | + | 1157 | WP_087879933.1 | IS3 family transposase IS600 | Transposase |
| FORC11_RS30690 (324992) | 324992..325354 | - | 363 | Protein_298 | 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase | - |
| FORC11_RS01605 (325372) | 325372..326316 | - | 945 | WP_000543457.1 | 3-carboxyethylcatechol 2,3-dioxygenase | - |
| FORC11_RS01610 (326318) | 326318..327982 | - | 1665 | WP_001007451.1 | bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase | - |
| FORC11_RS33100 (328024) | 328024..328857 | + | 834 | Protein_301 | DNA-binding transcriptional regulator | - |
| FORC11_RS01625 (328934) | 328934..330016 | + | 1083 | WP_000805902.1 | DNA-binding transcriptional repressor LacI | - |
| FORC11_RS01630 (330139) | 330139..333213 | + | 3075 | WP_000605342.1 | beta-galactosidase | - |
| FORC11_RS01635 (333265) | 333265..333558 | + | 294 | Protein_304 | MFS transporter | - |
| FORC11_RS01640 (333590) | 333590..334287 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| FORC11_RS01645 (334327) | 334327..334959 | + | 633 | WP_001355805.1 | LysE family transporter | - |
| FORC11_RS01650 (334976) | 334976..335221 | - | 246 | WP_000290612.1 | protein YahM | - |
| FORC11_RS01660 (335536) | 335536..336692 | + | 1157 | WP_094096605.1 | IS3 family transposase IS600 | Transposase |
| FORC11_RS01665 (336901) | 336901..337716 | - | 816 | WP_001359624.1 | protein YahL | - |
| FORC11_RS01675 (338736) | 338736..339785 | - | 1050 | WP_000692738.1 | NADPH-dependent aldehyde reductase YahK | - |
| FORC11_RS33105 (339872) | 339872..339946 | - | 75 | Protein_312 | hypothetical protein | - |
| FORC11_RS01680 (340162) | 340162..341544 | - | 1383 | WP_000665148.1 | amidohydrolase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|