MGE detailed information
MGE type: Prophage MGE length: 85131 bp
Accession: NZ_CP010829 Location: 1329122..1414252 Organism: Shigella sonnei strain FORC_011 Replicon: chromosome
Accession: NZ_CP010829 Location: 1329122..1414252 Organism: Shigella sonnei strain FORC_011 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC11_RS06825 () | 1324881..1327205 | + | 2325 | Protein_1286 | trimethylamine N-oxide reductase TorZ | - |
| FORC11_RS06830 () | 1327370..1328341 | - | 972 | WP_000564745.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| FORC11_RS06835 () | 1328338..1329081 | - | 744 | WP_000019601.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| FORC11_RS06840 () | 1329122..1329517 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| FORC11_RS06845 () | 1329570..1329917 | - | 348 | Protein_1290 | DUF72 domain-containing protein | - |
| FORC11_RS06850 () | 1330504..1331055 | + | 552 | WP_000996134.1 | Tn3 family transposase TnpR_ISAli20 | Transposase |
| FORC11_RS27870 () | 1331424..1332086 | + | 663 | WP_000021003.1 | DNA N-6-adenine-methyltransferase | - |
| FORC11_RS32670 () | 1332450..1333339 | + | 890 | Protein_1293 | helix-turn-helix domain-containing protein | - |
| FORC11_RS06865 () | 1333339..1333629 | + | 291 | WP_000666098.1 | hypothetical protein | - |
| FORC11_RS06875 () | 1333950..1334240 | + | 291 | WP_001216625.1 | hypothetical protein | - |
| FORC11_RS06880 () | 1334240..1334659 | + | 420 | WP_000882666.1 | hypothetical protein | - |
| FORC11_RS06885 () | 1334827..1335150 | + | 324 | WP_039059348.1 | hypothetical protein | - |
| FORC11_RS06890 () | 1335580..1336191 | + | 612 | WP_000620676.1 | hypothetical protein | - |
| FORC11_RS06900 () | 1336243..1337399 | + | 1157 | WP_087879933.1 | IS3 family transposase IS600 | Transposase |
| FORC11_RS27020 () | 1337396..1337569 | - | 174 | WP_005145943.1 | DUF1737 domain-containing protein | - |
| FORC11_RS06905 () | 1337830..1338165 | + | 336 | WP_032156133.1 | anti-adapter protein IraM | - |
| FORC11_RS32675 () | 1338446..1338577 | - | 132 | WP_000562553.1 | DUF3927 family protein | - |
| FORC11_RS06930 () | 1339432..1340286 | - | 855 | WP_000762867.1 | antitermination protein | - |
| FORC11_RS06935 () | 1340283..1340657 | - | 375 | WP_001215509.1 | RusA family crossover junction endodeoxyribonuclease | - |
| FORC11_RS06940 () | 1340657..1340914 | - | 258 | WP_001064800.1 | hypothetical protein | - |
| FORC11_RS06945 () | 1341249..1342046 | - | 798 | WP_000544828.1 | IS21 family transposase IS21 | Transposase |
| FORC11_RS06950 () | 1342046..1343218 | - | 1173 | WP_000952382.1 | IS21 family transposase IS21 | Transposase |
| FORC11_RS06960 () | 1343252..1344372 | + | 1121 | Protein_1308 | IS3 family transposase IS2 | Transposase |
| FORC11_RS31095 () | 1344489..1344937 | + | 449 | Protein_1309 | IS3 family transposase IS600 | Transposase |
| FORC11_RS06975 () | 1345706..1346421 | + | 716 | Protein_1311 | IS3 family transposase IS600 | Transposase |
| FORC11_RS06980 () | 1346530..1347402 | + | 873 | Protein_1312 | phage tail protein | - |
| FORC11_RS06985 () | 1347353..1347976 | + | 624 | WP_000930149.1 | DUF4376 domain-containing protein | - |
| FORC11_RS27890 () | 1348156..1349907 | - | 1752 | WP_005153521.1 | hypothetical protein | VF |
| FORC11_RS07000 () | 1350508..1350756 | - | 249 | WP_001217553.1 | DinI-like family protein | - |
| FORC11_RS33215 () | 1351019..1351114 | - | 96 | Protein_1316 | hypothetical protein | - |
| FORC11_RS07010 () | 1351111..1351677 | - | 567 | WP_000891620.1 | hydrolase | - |
| FORC11_RS07015 () | 1351987..1353759 | + | 1773 | WP_001258664.1 | aspartate--tRNA ligase | - |
| FORC11_RS07020 () | 1353877..1354329 | + | 453 | WP_001308712.1 | dihydroneopterin triphosphate diphosphatase | - |
| FORC11_RS07025 () | 1354358..1355098 | + | 741 | WP_000907248.1 | transcriptional regulatory protein YebC | VF |
| FORC11_RS07030 () | 1355133..1355654 | + | 522 | WP_005140141.1 | crossover junction endodeoxyribonuclease RuvC | - |
| FORC11_RS07035 () | 1355656..1356258 | - | 603 | WP_001024929.1 | YebB family permuted papain-like enzyme | - |
| FORC11_RS31110 () | 1356331..1356396 | + | 66 | WP_072095795.1 | stress response small protein YobI | - |
| FORC11_RS07040 () | 1356535..1357146 | + | 612 | WP_000580326.1 | Holliday junction branch migration protein RuvA | - |
| FORC11_RS07045 () | 1357155..1358165 | + | 1011 | WP_000568511.1 | Holliday junction branch migration DNA helicase RuvB | - |
| FORC11_RS07050 () | 1358312..1359097 | - | 786 | WP_000571478.1 | hypothetical protein | VF |
| FORC11_RS07055 () | 1359094..1359849 | - | 756 | WP_000202996.1 | hypothetical protein | VF |
| FORC11_RS07060 () | 1359928..1360860 | + | 933 | WP_001300644.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| FORC11_RS07065 () | 1360876..1362198 | + | 1323 | WP_001184041.1 | murein DD-endopeptidase MepM | - |
| FORC11_RS07070 () | 1362318..1363289 | + | 972 | WP_000448381.1 | hypothetical protein | VF |
| FORC11_RS07075 () | 1363377..1364834 | - | 1458 | Protein_1331 | glycoside hydrolase family 38 C-terminal domain-containing protein | - |
| FORC11_RS07080 () | 1365603..1367228 | - | 1626 | Protein_1333 | alpha-mannosidase | - |
| FORC11_RS07085 () | 1367265..1369133 | - | 1869 | WP_000575888.1 | glycoside hydrolase family 127 protein | - |
| FORC11_RS07090 () | 1369222..1369461 | - | 240 | WP_000961944.1 | hypothetical protein | - |
| FORC11_RS07095 () | 1369583..1370280 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| FORC11_RS07100 () | 1370401..1371243 | + | 843 | WP_000546442.1 | Nif3-like dinuclear metal center hexameric protein | - |
| FORC11_RS07105 () | 1371303..1372745 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| FORC11_RS07110 () | 1372873..1373742 | - | 870 | WP_001056711.1 | DNA-binding transcriptional regulator HexR | - |
| FORC11_RS07120 () | 1374080..1375555 | + | 1476 | WP_000301720.1 | glucose-6-phosphate dehydrogenase | - |
| FORC11_RS07125 () | 1375790..1377601 | + | 1812 | WP_001069438.1 | phosphogluconate dehydratase | - |
| FORC11_RS07130 () | 1377638..1378279 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| FORC11_RS07135 () | 1378335..1379513 | - | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| FORC11_RS07140 () | 1379647..1379937 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| FORC11_RS07145 () | 1380004..1380360 | + | 357 | WP_001295500.1 | protein YebF | - |
| FORC11_RS07155 () | 1380687..1381346 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| FORC11_RS07160 () | 1381555..1383615 | + | 2061 | WP_000936913.1 | oligopeptidase B | - |
| FORC11_RS07165 () | 1383612..1384274 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| FORC11_RS07170 () | 1384298..1384954 | - | 657 | WP_000011652.1 | carbon-nitrogen hydrolase family protein YobB | - |
| FORC11_RS07175 () | 1385056..1385286 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| FORC11_RS07180 () | 1385425..1385799 | + | 375 | WP_000168735.1 | CopC domain-containing protein YobA | - |
| FORC11_RS07185 () | 1385803..1386675 | + | 873 | WP_000879296.1 | copper homeostasis membrane protein CopD | - |
| FORC11_RS07190 () | 1386688..1387029 | + | 342 | WP_000976476.1 | YebY family protein | - |
| - | 1387057..1387291 | - | 235 | - | - | Antitoxin Detail |
| - | 1387187..1387290 | + | 104 | - | - | Toxin Detail |
| FORC11_RS07200 () | 1387422..1388498 | - | 1077 | WP_001189101.1 | hypothetical protein ; Integrase | Integrase |
| FORC11_RS07205 () | 1388535..1388780 | - | 246 | Protein_1355 | IS1 family transposase IS1R | Transposase |
| FORC11_RS31130 () | 1390114..1390568 | - | 455 | Protein_1357 | IS1-like element IS1A family transposase | - |
| FORC11_RS27935 () | 1390597..1390857 | - | 261 | WP_077447296.1 | excisionase | - |
| FORC11_RS07230 () | 1391002..1392158 | + | 1157 | WP_087879964.1 | IS3 family transposase IS600 | Transposase |
| FORC11_RS07235 () | 1392274..1393989 | - | 1716 | WP_011310192.1 | hypothetical protein | VF |
| FORC11_RS31145 () | 1395998..1396171 | + | 174 | Protein_1362 | metallophosphoesterase | - |
| FORC11_RS07255 () | 1396937..1397242 | + | 306 | Protein_1364 | serine/threonine-protein phosphatase | - |
| FORC11_RS07265 () | 1397300..1398456 | + | 1157 | WP_094096605.1 | IS3 family transposase IS600 | Transposase |
| FORC11_RS31155 () | 1398498..1398698 | + | 201 | Protein_1366 | serine/threonine-protein phosphatase | - |
| FORC11_RS07275 () | 1398699..1398890 | - | 192 | WP_001296140.1 | YebW family protein | - |
| FORC11_RS07280 () | 1398995..1399153 | - | 159 | Protein_1368 | DUF1480 family protein | - |
| FORC11_RS07285 () | 1399211..1399908 | + | 698 | WP_237158197.1 | IS1-like element IS1A family transposase | - |
| FORC11_RS33220 () | 1399925..1400008 | - | 84 | Protein_1370 | DUF1480 family protein | - |
| FORC11_RS07290 () | 1400126..1401565 | - | 1440 | WP_005138560.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| FORC11_RS07295 () | 1401646..1404279 | - | 2634 | WP_005138565.1 | hypothetical protein | VF |
| FORC11_RS07300 () | 1404248..1405531 | - | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| FORC11_RS07305 () | 1405661..1406158 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| FORC11_RS07310 () | 1406255..1406953 | + | 699 | WP_000431362.1 | RNA chaperone ProQ | - |
| FORC11_RS07315 () | 1406973..1409021 | + | 2049 | WP_011310196.1 | carboxy terminal-processing peptidase | - |
| FORC11_RS07320 () | 1409213..1410094 | + | 882 | WP_000984517.1 | protease HtpX | - |
| FORC11_RS07325 () | 1410140..1411203 | - | 1064 | Protein_1378 | MFS transporter | - |
| FORC11_RS07330 () | 1411380..1412171 | + | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| FORC11_RS07335 () | 1412314..1412553 | - | 240 | WP_001211011.1 | YobH family protein | - |
| FORC11_RS07340 () | 1412712..1412855 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| FORC11_RS07345 () | 1412930..1413217 | + | 288 | WP_001006860.1 | YebO family protein | - |
| FORC11_RS07355 () | 1413887..1414030 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| FORC11_RS07360 () | 1414043..1414252 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| FORC11_RS07365 () | 1414418..1415227 | + | 810 | WP_000010143.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| FORC11_RS07370 () | 1415224..1415790 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| FORC11_RS07380 () | 1416219..1416677 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| FORC11_RS07385 () | 1416732..1417583 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| FORC11_RS07390 () | 1417596..1418396 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|