MGE detailed information
MGE type: Integron MGE length: 37445 bp
Accession: NZ_CP010811 Location: 1721457..1758901 Organism: Vibrio cholerae strain 1154-74 Replicon: chromosome
Accession: NZ_CP010811 Location: 1721457..1758901 Organism: Vibrio cholerae strain 1154-74 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VAA049_RS07805 () | 1717490..1718002 | + | 513 | WP_001089201.1 | glycine cleavage system protein R | - |
| VAA049_RS07810 () | 1718233..1719843 | + | 1611 | WP_000915502.1 | methyl-accepting chemotaxis protein | - |
| VAA049_RS07815 () | 1719936..1720286 | + | 351 | WP_000041073.1 | DUF2750 domain-containing protein | - |
| VAA049_RS07820 () | 1720346..1721386 | - | 1041 | WP_046121496.1 | IS481 family transposase | - |
| VAA049_RS07825 () | 1721745..1722383 | - | 639 | WP_032475759.1 | HD domain-containing protein | - |
| VAA049_RS07830 () | 1722551..1722967 | - | 417 | WP_000759008.1 | DUF1311 domain-containing protein | - |
| VAA049_RS07835 () | 1723106..1723390 | - | 285 | WP_046121677.1 | antibiotic biosynthesis monooxygenase | - |
| VAA049_RS19335 () | 1723434..1723505 | - | 72 | Protein_1496 | acetyltransferase | - |
| VAA049_RS18960 () | 1723952..1724053 | - | 102 | WP_138040470.1 | hypothetical protein | - |
| VAA049_RS07845 () | 1724069..1724194 | - | 126 | WP_046121678.1 | DUF645 family protein | - |
| VAA049_RS19395 () | 1724551..1724647 | - | 97 | Protein_1499 | DUF645 family protein | - |
| VAA049_RS07850 () | 1724997..1725278 | - | 282 | WP_052723528.1 | nucleotide-binding protein | - |
| VAA049_RS07855 () | 1725275..1726195 | - | 921 | WP_046121544.1 | IS5 family transposase ISVpa3 | Transposase |
| VAA049_RS18205 () | 1726246..1726593 | - | 348 | WP_052723529.1 | nucleotide-binding protein | - |
| VAA049_RS18210 () | 1726630..1726959 | - | 330 | WP_052723530.1 | hypothetical protein | - |
| VAA049_RS07865 () | 1727122..1727547 | - | 426 | WP_032477393.1 | hypothetical protein | - |
| VAA049_RS07870 () | 1727816..1728181 | - | 366 | WP_046121679.1 | DUF3465 domain-containing protein | - |
| VAA049_RS07875 () | 1728397..1728642 | + | 246 | WP_001260801.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| VAA049_RS07880 () | 1728642..1728959 | + | 318 | WP_000077449.1 | CcdB family protein | - |
| VAA049_RS19340 () | 1729077..1729493 | - | 417 | WP_144407491.1 | hypothetical protein | - |
| VAA049_RS18465 () | 1729540..1729656 | - | 117 | WP_080342629.1 | DUF3265 domain-containing protein | - |
| VAA049_RS07890 () | 1729653..1730405 | - | 753 | WP_046121681.1 | hypothetical protein | - |
| VAA049_RS07895 () | 1730554..1730949 | - | 396 | WP_046121682.1 | DUF3465 domain-containing protein | - |
| VAA049_RS07900 () | 1731119..1731544 | - | 426 | WP_032473260.1 | hypothetical protein | - |
| VAA049_RS19345 () | 1731795..1732415 | - | 621 | WP_046121683.1 | hypothetical protein | - |
| VAA049_RS07910 () | 1732560..1733192 | - | 633 | WP_046121684.1 | hypothetical protein | - |
| VAA049_RS19220 () | 1733338..1734159 | - | 822 | WP_046121685.1 | hypothetical protein | - |
| VAA049_RS19350 () | 1734430..1734679 | - | 250 | Protein_1516 | DUF3709 domain-containing protein | - |
| VAA049_RS19225 () | 1734769..1735506 | - | 738 | WP_080342439.1 | hypothetical protein | - |
| VAA049_RS07930 () | 1735694..1736653 | + | 960 | WP_046121687.1 | IS30 family transposase ISVvu6 | Transposase |
| VAA049_RS18995 () | 1736684..1737238 | - | 555 | WP_071187841.1 | DUF4875 domain-containing protein | - |
| VAA049_RS07940 () | 1737391..1737750 | - | 360 | Protein_1520 | VOC family protein | - |
| VAA049_RS07945 () | 1737914..1738309 | - | 396 | WP_000870860.1 | DUF3465 domain-containing protein | - |
| VAA049_RS18490 () | 1738344..1738502 | - | 159 | WP_080342440.1 | DUF3265 domain-containing protein | - |
| VAA049_RS07950 () | 1739272..1739667 | - | 396 | WP_032479100.1 | DUF3465 domain-containing protein | - |
| VAA049_RS19230 () | 1739835..1740572 | - | 738 | WP_158507619.1 | hypothetical protein | - |
| VAA049_RS07960 () | 1740624..1740887 | - | 264 | WP_000098716.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| VAA049_RS07965 () | 1740880..1741134 | - | 255 | WP_001223794.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| VAA049_RS07970 () | 1741404..1741585 | - | 182 | Protein_1527 | DUF645 family protein | - |
| VAA049_RS07985 () | 1741990..1742271 | - | 282 | WP_001894429.1 | DUF1289 domain-containing protein | - |
| VAA049_RS18510 () | 1742220..1742333 | - | 114 | WP_080342443.1 | acetyltransferase | - |
| VAA049_RS07990 () | 1742390..1742746 | - | 357 | WP_046121691.1 | hypothetical protein | - |
| VAA049_RS07995 () | 1742886..1743311 | - | 426 | WP_046121692.1 | GNAT family N-acetyltransferase | - |
| VAA049_RS18515 () | 1743337..1743447 | - | 111 | WP_080342631.1 | DUF3265 domain-containing protein | - |
| VAA049_RS08000 () | 1743444..1743902 | - | 459 | WP_046121693.1 | hypothetical protein | - |
| VAA049_RS08005 () | 1744057..1744533 | - | 477 | WP_046121694.1 | GNAT family N-acetyltransferase | - |
| VAA049_RS19015 () | 1744499..1744672 | - | 174 | Protein_1535 | DUF3265 domain-containing protein | - |
| VAA049_RS08010 () | 1744669..1745088 | - | 420 | WP_041051853.1 | hypothetical protein | - |
| VAA049_RS08015 () | 1745289..1745471 | - | 183 | WP_002044921.1 | DUF645 family protein | - |
| VAA049_RS08025 () | 1745765..1746601 | - | 837 | WP_001066474.1 | hypothetical protein | - |
| VAA049_RS08030 () | 1746737..1747252 | - | 516 | WP_046121695.1 | hypothetical protein | - |
| VAA049_RS08035 () | 1747372..1747848 | - | 477 | WP_046121696.1 | GNAT family N-acetyltransferase | - |
| VAA049_RS08040 () | 1747999..1748388 | - | 390 | WP_046121697.1 | VOC family protein | - |
| VAA049_RS08045 () | 1748646..1748894 | - | 249 | WP_046121698.1 | hypothetical protein | - |
| VAA049_RS18530 () | 1748934..1749059 | - | 126 | WP_080342445.1 | DUF3265 domain-containing protein | - |
| VAA049_RS18535 () | 1749399..1749524 | - | 126 | WP_080342446.1 | DUF3265 domain-containing protein | - |
| VAA049_RS08050 () | 1749976..1750464 | - | 489 | WP_002051091.1 | GNAT family N-acetyltransferase | - |
| VAA049_RS08055 () | 1750596..1751132 | - | 537 | WP_046122401.1 | nucleotidyltransferase family protein | - |
| VAA049_RS08060 () | 1751267..1751722 | - | 456 | WP_001245329.1 | GNAT family N-acetyltransferase | - |
| VAA049_RS08065 () | 1751852..1752247 | - | 396 | WP_046121699.1 | DUF3465 domain-containing protein | - |
| VAA049_RS08070 () | 1752411..1752875 | - | 465 | WP_046121700.1 | ASCH domain-containing protein | - |
| VAA049_RS19030 () | 1753122..1753259 | - | 138 | WP_000757220.1 | YHYH domain-containing protein | - |
| VAA049_RS08075 () | 1753477..1754526 | - | 1050 | WP_046121701.1 | HAMP domain-containing histidine kinase | - |
| VAA049_RS08080 () | 1754519..1755250 | - | 732 | WP_046121702.1 | response regulator | - |
| VAA049_RS18550 () | 1755552..1755836 | - | 285 | WP_162484600.1 | DUF3709 domain-containing protein | - |
| VAA049_RS19035 () | 1755830..1755982 | - | 153 | WP_114755988.1 | DUF3709 domain-containing protein | - |
| VAA049_RS18555 () | 1755972..1756118 | - | 147 | WP_144407497.1 | DUF3265 domain-containing protein | - |
| VAA049_RS08085 () | 1756520..1757683 | - | 1164 | WP_046121703.1 | hypothetical protein | - |
| VAA049_RS08090 () | 1757939..1758901 | + | 963 | WP_000841995.1 | IS91 family transposase ISAzo26 | Transposase |
| VAA049_RS08095 () | 1758983..1759336 | - | 354 | WP_001138366.1 | 50S ribosomal protein L20 | - |
| VAA049_RS08100 () | 1759378..1759572 | - | 195 | WP_001885060.1 | 50S ribosomal protein L35 | - |
| VAA049_RS08105 () | 1759676..1760227 | - | 552 | WP_001894072.1 | translation initiation factor IF-3 | - |
| VAA049_RS08110 () | 1760231..1762159 | - | 1929 | WP_001121787.1 | threonine--tRNA ligase | - |
| VAA049_RS19355 () | 1762428..1762655 | - | 228 | WP_001911595.1 | hypothetical protein | - |
| VAA049_RS08120 () | 1762780..1763451 | - | 672 | WP_000132861.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|