MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 84290 bp
Accession: NZ_CP010652 Location: 1..84290 Organism: Phaeobacter inhibens strain P54 Replicon: plasmid pP54_b
Accession: NZ_CP010652 Location: 1..84290 Organism: Phaeobacter inhibens strain P54 Replicon: plasmid pP54_b
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PhaeoP54_RS18760 () | 1..1194 | + | 1194 | WP_090525069.1 | Sporulation initiation inhibitor protein Soj | VF |
| PhaeoP54_RS18765 () | 1178..2107 | + | 930 | WP_090525071.1 | plasmid partitioning protein RepB | - |
| PhaeoP54_RS18770 () | 2321..3532 | + | 1212 | WP_089963197.1 | replication initiation protein RepC | - |
| PhaeoP54_RS18775 () | 4744..5214 | + | 471 | WP_172975811.1 | hypothetical protein | - |
| PhaeoP54_RS18780 () | 5254..5895 | + | 642 | Protein_4 | DUF1738 domain-containing protein | - |
| PhaeoP54_RS18785 () | 5978..6976 | - | 999 | WP_102856250.1 | Tyrosine recombinase XerD | VF |
| PhaeoP54_RS18790 () | 6973..7917 | - | 945 | WP_102856249.1 | tyrosine-type recombinase/integrase | - |
| PhaeoP54_RS18795 () | 7914..8825 | - | 912 | WP_058123598.1 | Tyrosine recombinase XerD | VF |
| PhaeoP54_RS18800 () | 9370..9672 | + | 303 | Protein_8 | antirestriction protein | - |
| PhaeoP54_RS18805 () | 9743..10132 | + | 390 | WP_090525076.1 | DUF3768 domain-containing protein | - |
| PhaeoP54_RS18810 () | 10288..12270 | + | 1983 | WP_090525078.1 | ParB/RepB/Spo0J family partition protein | - |
| PhaeoP54_RS18815 () | 12344..12937 | + | 594 | WP_090525080.1 | regulator | - |
| PhaeoP54_RS18820 () | 12937..13593 | + | 657 | WP_090525082.1 | hypothetical protein | - |
| PhaeoP54_RS18825 () | 13698..13997 | + | 300 | WP_044353023.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| PhaeoP54_RS18830 () | 13984..14259 | + | 276 | WP_071974127.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| PhaeoP54_RS18835 () | 14367..18629 | + | 4263 | WP_102877816.1 | strawberry notch family protein | - |
| PhaeoP54_RS18840 () | 18751..19137 | + | 387 | WP_090525086.1 | hypothetical protein | - |
| PhaeoP54_RS18845 () | 19139..19600 | + | 462 | WP_090525089.1 | hypothetical protein | - |
| PhaeoP54_RS18850 () | 19701..20003 | + | 303 | WP_090525091.1 | hypothetical protein | - |
| PhaeoP54_RS18855 () | 20128..20856 | + | 729 | WP_090525093.1 | DUF736 family protein | - |
| PhaeoP54_RS18865 () | 21457..21783 | - | 327 | WP_040546036.1 | YnfA family protein | - |
| PhaeoP54_RS18870 () | 21840..23192 | - | 1353 | WP_017467591.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| PhaeoP54_RS18875 () | 23215..24663 | - | 1449 | WP_102877817.1 | mercury(II) reductase | - |
| PhaeoP54_RS20275 () | 24647..24784 | - | 138 | WP_007803572.1 | hypothetical protein | - |
| PhaeoP54_RS18880 () | 24781..25167 | - | 387 | WP_007803570.1 | mercury resistance system transport protein MerF | - |
| PhaeoP54_RS18885 () | 25164..25415 | - | 252 | WP_072629817.1 | hypothetical protein | - |
| PhaeoP54_RS18890 () | 25426..25728 | - | 303 | WP_040545980.1 | hypothetical protein | - |
| PhaeoP54_RS18895 () | 25744..26151 | - | 408 | WP_007803565.1 | mercury transporter | - |
| PhaeoP54_RS18900 () | 26228..26641 | + | 414 | WP_153218054.1 | helix-turn-helix domain-containing protein | - |
| PhaeoP54_RS18905 () | 26887..27258 | + | 372 | WP_072702312.1 | hypothetical protein | - |
| PhaeoP54_RS18910 () | 27389..27988 | + | 600 | WP_017468205.1 | rhomboid family intramembrane serine protease | - |
| PhaeoP54_RS18915 () | 28268..30244 | + | 1977 | WP_072702316.1 | ATP-binding protein | - |
| PhaeoP54_RS18920 () | 30449..31429 | - | 981 | WP_072702319.1 | Abi family protein | - |
| PhaeoP54_RS18925 () | 32290..33219 | + | 930 | WP_090525676.1 | DUF2493 domain-containing protein | - |
| PhaeoP54_RS18935 () | 33758..33964 | + | 207 | WP_090525678.1 | hypothetical protein | - |
| PhaeoP54_RS18940 () | 34481..35062 | + | 582 | WP_065323582.1 | transposase | - |
| PhaeoP54_RS18945 () | 35049..37382 | + | 2334 | WP_102877818.1 | T-DNA border endonuclease VirD2 | Relaxase |
| PhaeoP54_RS18950 () | 37391..39391 | + | 2001 | WP_043872263.1 | Protein VirD4 | VF |
| PhaeoP54_RS18955 () | 39527..40654 | - | 1128 | WP_043872264.1 | SAVED domain-containing protein | - |
| PhaeoP54_RS18960 () | 40746..41258 | - | 513 | WP_074743312.1 | Mov34/MPN/PAD-1 family protein | - |
| PhaeoP54_RS18965 () | 41248..42966 | - | 1719 | WP_074743314.1 | ThiF family adenylyltransferase | - |
| PhaeoP54_RS18970 () | 42966..44204 | - | 1239 | WP_052453650.1 | nucleotidyltransferase | - |
| PhaeoP54_RS18975 () | 44394..45470 | - | 1077 | WP_043872265.1 | hypothetical protein | VF |
| PhaeoP54_RS18980 () | 45483..45896 | - | 414 | WP_043872266.1 | hypothetical protein | - |
| PhaeoP54_RS18985 () | 45893..46087 | - | 195 | WP_043872267.1 | DUF4177 domain-containing protein | - |
| PhaeoP54_RS18990 () | 46084..47070 | - | 987 | WP_102877819.1 | Type IV secretion system protein VirB11 | VF |
| PhaeoP54_RS18995 () | 47074..48453 | - | 1380 | WP_102877820.1 | Type IV secretion system protein PtlG | VF |
| PhaeoP54_RS19000 () | 48450..49145 | - | 696 | WP_102877821.1 | Type IV secretion system protein virB9 | VF |
| PhaeoP54_RS19005 () | 49148..49801 | - | 654 | WP_027246643.1 | type IV secretion system protein | - |
| PhaeoP54_RS19010 () | 49817..50626 | - | 810 | WP_102877822.1 | conjugal transfer protein TraF | - |
| PhaeoP54_RS19015 () | 50626..51780 | - | 1155 | WP_199537804.1 | lytic transglycosylase domain-containing protein | - |
| PhaeoP54_RS20340 () | 51770..51937 | - | 168 | WP_162841715.1 | hypothetical protein | - |
| PhaeoP54_RS19020 () | 51934..54309 | - | 2376 | WP_043872271.1 | type IV secretion system DNA-binding domain-containing protein | - |
| PhaeoP54_RS19025 () | 54299..54577 | - | 279 | WP_040104433.1 | hypothetical protein | VF |
| PhaeoP54_RS19030 () | 54570..54863 | - | 294 | WP_043872272.1 | Type IV secretion system protein virB2 | VF |
| PhaeoP54_RS19035 () | 54860..55480 | - | 621 | WP_043872273.1 | lytic transglycosylase domain-containing protein | - |
| PhaeoP54_RS19040 () | 55524..55892 | - | 369 | WP_009807505.1 | hypothetical protein | - |
| PhaeoP54_RS19045 () | 56103..56354 | + | 252 | WP_037275520.1 | hypothetical protein | - |
| PhaeoP54_RS19050 () | 56479..56736 | + | 258 | WP_037275519.1 | helix-turn-helix domain-containing protein | - |
| PhaeoP54_RS19055 () | 56903..57127 | + | 225 | WP_008282968.1 | hypothetical protein | - |
| PhaeoP54_RS19060 () | 57231..57986 | - | 756 | WP_085976983.1 | hypothetical protein | - |
| PhaeoP54_RS19065 () | 58421..59365 | - | 945 | WP_008282971.1 | cation diffusion facilitator family transporter | - |
| PhaeoP54_RS19070 () | 59355..60125 | - | 771 | WP_008282972.1 | transglutaminase family protein | - |
| PhaeoP54_RS19075 () | 60219..60953 | - | 735 | WP_008282973.1 | cytochrome C biogenesis protein CcdA | - |
| PhaeoP54_RS19080 () | 61032..61358 | - | 327 | WP_043872274.1 | YnfA family protein | - |
| PhaeoP54_RS19085 () | 61360..61788 | - | 429 | WP_037239845.1 | IS607 family transposase ISChh1 | Transposase |
| PhaeoP54_RS19090 () | 62002..62568 | + | 567 | WP_043872275.1 | SCO family protein | - |
| PhaeoP54_RS19095 () | 62574..62996 | + | 423 | WP_009820114.1 | disulfide bond formation protein B | - |
| PhaeoP54_RS19100 () | 62993..63652 | + | 660 | WP_009820115.1 | thioredoxin domain-containing protein | - |
| PhaeoP54_RS19105 () | 63681..64148 | + | 468 | WP_040652268.1 | copper chaperone PCu(A)C | - |
| PhaeoP54_RS19110 () | 64148..64774 | + | 627 | WP_043872276.1 | SCO family protein | - |
| PhaeoP54_RS19115 () | 64771..66144 | + | 1374 | WP_043872277.1 | M23 family metallopeptidase | - |
| PhaeoP54_RS19120 () | 66148..66606 | + | 459 | WP_009820119.1 | DUF411 domain-containing protein | - |
| PhaeoP54_RS19125 () | 66629..67414 | + | 786 | WP_040652270.1 | ZIP family metal transporter | - |
| PhaeoP54_RS19130 () | 67395..67889 | + | 495 | WP_009820121.1 | Lipoprotein signal peptidase | VF |
| PhaeoP54_RS19135 () | 68093..69457 | + | 1365 | WP_043872278.1 | apolipoprotein N-acyltransferase | - |
| PhaeoP54_RS19140 () | 69457..69624 | + | 168 | WP_043872279.1 | hypothetical protein | - |
| PhaeoP54_RS19145 () | 69649..71568 | + | 1920 | WP_043872280.1 | penicillin acylase family protein | - |
| PhaeoP54_RS19150 () | 71565..72557 | + | 993 | WP_040652273.1 | cytochrome c oxidase assembly protein | - |
| PhaeoP54_RS19155 () | 72801..73271 | - | 471 | WP_009820125.1 | Transcriptional regulator MntR | VF |
| PhaeoP54_RS19160 () | 73366..75246 | + | 1881 | WP_052453654.1 | cytochrome c | - |
| PhaeoP54_RS19165 () | 75246..76121 | + | 876 | WP_043872281.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| PhaeoP54_RS19170 () | 76118..76900 | + | 783 | WP_052453653.1 | Phosphate-import ATP-binding protein PhnC | VF |
| PhaeoP54_RS19175 () | 76900..77658 | + | 759 | WP_009820129.1 | phosphonate ABC transporter, permease protein PhnE | - |
| PhaeoP54_RS19180 () | 77662..78138 | - | 477 | WP_043872282.1 | L,D-transpeptidase family protein | - |
| PhaeoP54_RS19185 () | 78238..80424 | - | 2187 | WP_043872283.1 | cation-translocating P-type ATPase | - |
| PhaeoP54_RS19200 () | 81113..81778 | - | 666 | WP_043872284.1 | L,D-transpeptidase | - |
| PhaeoP54_RS19205 () | 81981..83048 | - | 1068 | WP_050686115.1 | hypothetical protein | - |
| PhaeoP54_RS19210 () | 83275..84156 | + | 882 | WP_090525067.1 | Tn3 family transposase ISPsy42 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|