MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 85250 bp
Accession: NZ_CP010555 Location: 5486878..5572127 Organism: Pseudomonas aeruginosa strain FRD1 Replicon: chromosome
Accession: NZ_CP010555 Location: 5486878..5572127 Organism: Pseudomonas aeruginosa strain FRD1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EG09_RS25080 () | 5482033..5482995 | + | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| EG09_RS25085 () | 5482992..5483720 | + | 729 | WP_003102588.1 | peptidoglycan editing factor PgeF | - |
| EG09_RS25090 () | 5483876..5486440 | + | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| EG09_RS25110 () | 5487293..5488573 | - | 1281 | WP_016852952.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EG09_RS25115 () | 5488570..5490489 | - | 1920 | WP_016852953.1 | helicase/relaxase domain-containing protein | - |
| EG09_RS25120 () | 5490819..5491169 | - | 351 | WP_023122676.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| EG09_RS25125 () | 5491173..5491445 | - | 273 | WP_023122675.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| EG09_RS32370 () | 5491564..5491887 | + | 324 | WP_071533856.1 | hypothetical protein | - |
| EG09_RS25130 () | 5491913..5493427 | - | 1515 | WP_016851630.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| EG09_RS25135 () | 5493424..5493771 | - | 348 | WP_016851629.1 | hypothetical protein | - |
| EG09_RS25140 () | 5493771..5495153 | - | 1383 | WP_033940397.1 | integrating conjugative element protein | - |
| EG09_RS25145 () | 5495171..5496109 | - | 939 | WP_015648281.1 | TIGR03756 family integrating conjugative element protein | - |
| EG09_RS25150 () | 5496109..5496540 | - | 432 | WP_015648282.1 | TIGR03757 family integrating conjugative element protein | - |
| EG09_RS31950 () | 5496819..5498921 | + | 2103 | WP_071540815.1 | ATP-binding protein | - |
| EG09_RS31955 () | 5498908..5500134 | - | 1227 | WP_071540816.1 | DNA cytosine methyltransferase | - |
| EG09_RS25155 () | 5500317..5500988 | - | 672 | WP_015648287.1 | DsbA family protein | - |
| EG09_RS25160 () | 5500985..5501269 | - | 285 | WP_015648288.1 | hypothetical protein | - |
| EG09_RS25165 () | 5501266..5504208 | - | 2943 | WP_031757563.1 | conjugative transfer ATPase | - |
| EG09_RS25170 () | 5504208..5504651 | - | 444 | WP_003123363.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| EG09_RS25175 () | 5504629..5506134 | - | 1506 | WP_003086162.1 | TIGR03752 family integrating conjugative element protein | - |
| EG09_RS25180 () | 5506118..5507002 | - | 885 | WP_033940399.1 | TIGR03749 family integrating conjugative element protein | - |
| EG09_RS25185 () | 5506999..5507658 | - | 660 | WP_033940400.1 | TIGR03746 family integrating conjugative element protein | - |
| EG09_RS25190 () | 5507655..5508041 | - | 387 | WP_017001410.1 | TIGR03750 family conjugal transfer protein | - |
| EG09_RS25195 () | 5508052..5508408 | - | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| EG09_RS25200 () | 5508426..5508665 | - | 240 | WP_003121019.1 | TIGR03758 family integrating conjugative element protein | - |
| EG09_RS25205 () | 5508662..5509000 | - | 339 | WP_003158157.1 | RAQPRD family integrative conjugative element protein | - |
| EG09_RS25210 () | 5509094..5509393 | - | 300 | WP_003117075.1 | hypothetical protein | - |
| EG09_RS31960 () | 5509566..5509877 | + | 312 | WP_003117074.1 | DUF2845 domain-containing protein | - |
| EG09_RS32375 () | 5509923..5511032 | - | 1110 | WP_003121016.1 | hypothetical protein | - |
| EG09_RS25220 () | 5511164..5512645 | - | 1482 | WP_003117073.1 | UvrD-helicase domain-containing protein | - |
| EG09_RS25225 () | 5512887..5513378 | - | 492 | WP_003099826.1 | hypothetical protein | - |
| EG09_RS25230 () | 5513396..5514142 | - | 747 | WP_003099824.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| EG09_RS25235 () | 5514142..5516373 | - | 2232 | WP_003099821.1 | type IV conjugative transfer system coupling protein TraD | - |
| EG09_RS25240 () | 5516377..5516583 | - | 207 | WP_073689213.1 | hypothetical protein | - |
| EG09_RS25245 () | 5516655..5517155 | - | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| EG09_RS25250 () | 5517152..5517733 | - | 582 | WP_003117072.1 | hypothetical protein | VF |
| EG09_RS25255 () | 5517718..5518473 | - | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| EG09_RS25260 () | 5518484..5519182 | - | 699 | WP_023094353.1 | hypothetical protein | - |
| EG09_RS25265 () | 5519400..5519672 | + | 273 | WP_003125312.1 | hypothetical protein | - |
| EG09_RS31965 () | 5520499..5520822 | - | 324 | WP_003158159.1 | hypothetical protein | - |
| EG09_RS25275 () | 5520841..5521233 | - | 393 | WP_003158160.1 | hypothetical protein | - |
| EG09_RS25280 () | 5521785..5522381 | - | 597 | WP_003158161.1 | VWA domain-containing protein | - |
| EG09_RS32380 () | 5522366..5522950 | - | 585 | WP_044265603.1 | hypothetical protein | - |
| EG09_RS25290 () | 5522975..5523349 | - | 375 | WP_003158163.1 | hypothetical protein | - |
| EG09_RS25295 () | 5524213..5524896 | - | 684 | WP_003158165.1 | SOS response-associated peptidase family protein | - |
| EG09_RS25300 () | 5525001..5525431 | + | 431 | Protein_5046 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| EG09_RS32385 () | 5525457..5525618 | - | 162 | Protein_5047 | helicase | - |
| EG09_RS25310 () | 5525724..5527169 | - | 1446 | WP_003158168.1 | class I SAM-dependent methyltransferase | - |
| EG09_RS25315 () | 5527199..5527804 | - | 606 | WP_003158169.1 | hypothetical protein | - |
| EG09_RS25320 () | 5527897..5528151 | - | 255 | WP_003117062.1 | hypothetical protein | - |
| EG09_RS25325 () | 5528219..5528581 | - | 363 | WP_003117061.1 | hypothetical protein | - |
| EG09_RS25330 () | 5528651..5528926 | - | 276 | WP_003117060.1 | hypothetical protein | - |
| EG09_RS25335 () | 5528923..5529555 | - | 633 | WP_003158170.1 | DUF3275 family protein | - |
| EG09_RS25340 () | 5529612..5529962 | - | 351 | WP_003099791.1 | hypothetical protein | - |
| EG09_RS25345 () | 5530198..5530905 | - | 708 | WP_003117058.1 | hypothetical protein | - |
| EG09_RS25355 () | 5531390..5531587 | - | 198 | WP_003117057.1 | hypothetical protein | - |
| EG09_RS32550 () | 5531661..5531819 | - | 159 | WP_003109368.1 | hypothetical protein | - |
| EG09_RS25360 () | 5531957..5532436 | - | 480 | WP_003117056.1 | DUF3577 domain-containing protein | - |
| EG09_RS32555 () | 5532897..5533070 | - | 174 | WP_003158172.1 | hypothetical protein | - |
| EG09_RS32560 () | 5533145..5533390 | - | 246 | WP_003117055.1 | hypothetical protein | - |
| EG09_RS25370 () | 5534453..5534890 | - | 438 | WP_003117054.1 | hypothetical protein | VF |
| EG09_RS25375 () | 5534908..5536287 | - | 1380 | WP_003117053.1 | hypothetical protein | VF |
| EG09_RS25380 () | 5536280..5537236 | - | 957 | WP_003117051.1 | hypothetical protein | VF |
| EG09_RS25385 () | 5537233..5537763 | - | 531 | WP_003099765.1 | hypothetical protein | VF |
| EG09_RS25390 () | 5537785..5538864 | - | 1080 | WP_003109360.1 | hypothetical protein | VF |
| EG09_RS25395 () | 5538864..5540444 | - | 1581 | WP_031806138.1 | hypothetical protein | VF |
| EG09_RS25400 () | 5540453..5540986 | - | 534 | WP_041127227.1 | hypothetical protein | VF |
| EG09_RS25405 () | 5540976..5542301 | - | 1326 | WP_031806139.1 | type 4b pilus protein PilO2 | - |
| EG09_RS25410 () | 5542305..5544014 | - | 1710 | WP_003099757.1 | hypothetical protein | VF |
| EG09_RS25415 () | 5544014..5545138 | - | 1125 | WP_012076859.1 | hypothetical protein | VF |
| EG09_RS25420 () | 5545340..5545639 | + | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EG09_RS25425 () | 5545636..5545926 | + | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| EG09_RS25430 () | 5545997..5546341 | - | 345 | WP_016851612.1 | hypothetical protein | - |
| EG09_RS25435 () | 5546482..5548458 | - | 1977 | WP_016851611.1 | DEAD/DEAH box helicase | - |
| EG09_RS25440 () | 5548455..5550344 | - | 1890 | WP_016851610.1 | hypothetical protein | - |
| EG09_RS25445 () | 5550566..5550775 | - | 210 | WP_003105733.1 | cold-shock protein | - |
| EG09_RS25450 () | 5551082..5553001 | - | 1920 | WP_023101571.1 | type I DNA topoisomerase | - |
| EG09_RS31990 () | 5553117..5553284 | - | 168 | WP_170323396.1 | CrpP family protein | - |
| EG09_RS25455 () | 5553529..5553723 | - | 195 | WP_016851608.1 | hypothetical protein | - |
| EG09_RS25460 () | 5553829..5554287 | - | 459 | WP_016851607.1 | single-stranded DNA-binding protein | - |
| EG09_RS25465 () | 5554317..5555147 | - | 831 | WP_012076855.1 | phage regulatory protein | - |
| EG09_RS25470 () | 5555195..5555743 | - | 549 | WP_016851606.1 | DUF3158 family protein | - |
| EG09_RS25475 () | 5555749..5556477 | - | 729 | WP_016851605.1 | TIGR03761 family integrating conjugative element protein | - |
| EG09_RS25480 () | 5556634..5556831 | - | 198 | WP_019396765.1 | hypothetical protein | - |
| EG09_RS32390 () | 5556859..5557878 | + | 1020 | WP_041127228.1 | hypothetical protein | - |
| EG09_RS32000 () | 5557884..5559188 | - | 1305 | WP_023101569.1 | hypothetical protein | - |
| EG09_RS25495 () | 5559185..5559952 | - | 768 | WP_016851602.1 | DUF2857 domain-containing protein | - |
| EG09_RS25500 () | 5559980..5561716 | - | 1737 | WP_023464346.1 | ParB family protein | - |
| EG09_RS25505 () | 5561713..5561982 | - | 270 | WP_003117035.1 | Arc family DNA-binding protein | - |
| EG09_RS25510 () | 5562003..5562893 | - | 891 | WP_016851600.1 | DNA adenine methylase | - |
| EG09_RS25515 () | 5562890..5563912 | - | 1023 | WP_019416389.1 | nucleoid-associated protein YejK | - |
| EG09_RS25520 () | 5563912..5564145 | - | 234 | WP_003103841.1 | hypothetical protein | - |
| EG09_RS25525 () | 5564138..5564377 | - | 240 | WP_016852964.1 | hypothetical protein | - |
| EG09_RS25530 () | 5564370..5564627 | - | 258 | WP_004352848.1 | hypothetical protein | - |
| EG09_RS25535 () | 5564624..5565151 | - | 528 | WP_016852965.1 | hypothetical protein | - |
| EG09_RS32395 () | 5565504..5565950 | + | 447 | WP_003117028.1 | hypothetical protein | - |
| EG09_RS25550 () | 5566389..5567732 | - | 1344 | WP_023101568.1 | replicative DNA helicase | - |
| EG09_RS25555 () | 5567851..5568552 | - | 702 | WP_016852969.1 | DUF2786 domain-containing protein | - |
| EG09_RS25560 () | 5568552..5569235 | - | 684 | WP_016852970.1 | hypothetical protein | - |
| EG09_RS25565 () | 5569232..5569885 | - | 654 | WP_041127229.1 | hypothetical protein | - |
| EG09_RS25570 () | 5569891..5570388 | - | 498 | WP_003111783.1 | hypothetical protein | - |
| EG09_RS25575 () | 5570385..5571122 | - | 738 | WP_041127230.1 | hypothetical protein | - |
| EG09_RS25580 () | 5571124..5571990 | - | 867 | WP_003111785.1 | ParA family protein | - |
| EG09_RS25585 () | 5572356..5576553 | - | 4198 | Protein_5104 | two-partner secretion system exoprotein TpsA4 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|