MGE detailed information
MGE type: Prophage MGE length: 18864 bp
Accession: NZ_CP010444 Location: 1025526..1044389 Organism: Escherichia coli K-12 strain K-12 MG1655 Replicon: chromosome
Accession: NZ_CP010444 Location: 1025526..1044389 Organism: Escherichia coli K-12 strain K-12 MG1655 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SH07_RS04955 () | 1021023..1021424 | + | 402 | WP_000174689.1 | sigma factor-binding protein Crl | - |
| SH07_RS04960 () | 1021463..1022518 | - | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| SH07_RS04965 () | 1022806..1023909 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| SH07_RS04970 () | 1023921..1025174 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| SH07_RS04980 () | 1025746..1026087 | - | 342 | WP_000854672.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| SH07_RS04985 () | 1026108..1026425 | - | 318 | WP_000070395.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| SH07_RS23430 () | 1026444..1026665 | - | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| SH07_RS04990 () | 1026674..1027150 | - | 477 | WP_000811693.1 | RadC family protein | - |
| SH07_RS04995 () | 1027166..1027624 | - | 459 | WP_000211838.1 | antirestriction protein | - |
| SH07_RS05000 () | 1027722..1027961 | - | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| SH07_RS05005 () | 1028038..1028505 | - | 468 | WP_001547765.1 | hypothetical protein | - |
| SH07_RS25395 () | 1028528..1028971 | - | 444 | WP_000824223.1 | hypothetical protein | - |
| SH07_RS25400 () | 1028971..1029198 | - | 228 | WP_001548158.1 | hypothetical protein | - |
| SH07_RS25405 () | 1029194..1029385 | - | 192 | Protein_928 | DeoR family transcriptional regulator | - |
| SH07_RS05020 () | 1029602..1030423 | - | 822 | WP_000197389.1 | DUF945 domain-containing protein | - |
| SH07_RS05025 () | 1030515..1031378 | - | 864 | WP_001065553.1 | GTPase family protein | - |
| SH07_RS05030 () | 1031707..1032600 | - | 894 | WP_000770246.1 | LysR family transcriptional regulator | - |
| SH07_RS05035 () | 1032696..1032953 | + | 258 | Protein_932 | IS3 family transposase ISEc52 | Transposase |
| SH07_RS05040 () | 1033021..1034172 | + | 1152 | WP_001254938.1 | IS30 family transposase IS30D | Transposase |
| SH07_RS05045 () | 1034182..1034607 | + | 426 | Protein_934 | IS3 family transposase | - |
| SH07_RS05060 () | 1035280..1036371 | + | 1092 | Protein_935 | group II intron reverse transcriptase/maturase | - |
| SH07_RS05065 () | 1036519..1037535 | - | 1017 | WP_010723085.1 | IS5 family transposase IS5D | Transposase |
| SH07_RS05070 () | 1037743..1039146 | + | 1404 | WP_001393629.1 | S-methylmethionine permease | - |
| SH07_RS05075 () | 1039133..1040065 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| SH07_RS05080 () | 1040174..1041220 | - | 1047 | WP_000192349.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| SH07_RS05085 () | 1041232..1041579 | - | 348 | Protein_940 | ABC transporter permease subunit | - |
| SH07_RS05090 () | 1041596..1042293 | - | 698 | Protein_941 | IS1 family transposase IS1R | Transposase |
| SH07_RS23455 () | 1042349..1042522 | + | 174 | Protein_942 | IS30 family transposase | - |
| SH07_RS05100 () | 1042532..1042780 | - | 249 | Protein_943 | IS3 family transposase ISEhe3 | Transposase |
| SH07_RS05105 () | 1042803..1043153 | - | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| SH07_RS05110 () | 1043247..1044401 | - | 1155 | WP_010723086.1 | IS481 family transposase ISEc19 | Transposase |
| SH07_RS05115 () | 1044696..1045604 | + | 909 | WP_001136613.1 | 2-keto-3-deoxygluconate aldolase | - |
| SH07_RS05120 () | 1045619..1047586 | + | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| SH07_RS05125 () | 1047813..1049195 | + | 1383 | WP_000192863.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|